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KU958700.1__AMS01591.1__SEA_CHYMERA_32__00032

Bact-Vir

KU958700.1__AMS01591.1__SEA_CHYMERA_32__00032

Identity

Accession:
KU958700 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.71 52.0 4.57e-01 78.6% 97.6%
4ga6A04 3.90.1170.30 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain 0.70 50.0 4.37e-01 75.0% 92.6%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.68 50.0 4.41e-01 78.6% 100.0%
4c0hA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 58.0 3.81e-01 100.0% 35.7%
1k1gA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 47.0 3.74e-01 80.4% 78.7%
1vwxB03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.64 54.0 4.30e-01 100.0% 95.1%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.63 46.0 4.08e-01 82.1% 82.0%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.61 44.0 2.99e-01 80.4% 20.0%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 49.0 4.03e-01 100.0% 48.7%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.60 47.0 4.32e-01 89.3% 97.3%
2g47A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 48.0 3.30e-01 98.2% 93.9%
3p2hA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 39.0 2.74e-01 71.4% 31.0%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.57 46.0 4.16e-01 100.0% 65.8%
6nyoA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.57 46.0 3.35e-01 100.0% 55.9%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 3.47e-01 78.6% 84.4%
2y9mA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 46.0 3.43e-01 100.0% 57.8%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 40.0 2.95e-01 85.7% 26.5%
1q2lA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 46.0 3.17e-01 100.0% 74.0%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 40.0 2.85e-01 78.6% 48.6%
3clqA04 3.90.1700.10 Alpha Beta › Alpha-Beta Complex › v583 fold › v583 domain like 0.54 47.0 3.37e-01 98.2% 99.4%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 43.0 2.94e-01 100.0% 23.0%
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 43.0 3.27e-01 96.4% 81.2%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 46.0 4.25e-01 100.0% 91.9%
4jxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 2.73e-01 78.6% 46.7%
4fvmA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 37.0 3.13e-01 76.8% 76.7%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 38.0 2.61e-01 76.8% 52.6%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.53 39.0 3.26e-01 82.1% 45.0%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 42.0 3.18e-01 100.0% 39.8%
7jvhC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 45.0 2.79e-01 100.0% 79.0%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 35.0 2.61e-01 71.4% 29.7%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.52 35.0 3.03e-01 71.4% 89.5%
5i3sC02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.50 36.0 2.91e-01 92.9% 34.8%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 43.0 3.52e-01 94.6% 63.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3174953 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.79 71.0 4.64e-01 100.0% 26.2%
5047318 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 58.0 4.01e-01 96.4% 33.7%
3588192 4325.1.1.7 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.68 54.0 5.67e-01 100.0% 100.0%
3661545 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.65 48.0 4.04e-01 82.1% 77.0%
4034609 4056.1.1.1 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 0.64 46.0 3.80e-01 78.6% 71.8%
4931497 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.64 53.0 4.18e-01 100.0% 44.3%
4941649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 47.0 4.08e-01 100.0% 49.5%
3614586 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.63 51.0 4.13e-01 96.4% 44.9%
3843785 292.2.1.10 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N 0.63 44.0 3.78e-01 91.1% 43.9%
3508084 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.60 48.0 4.26e-01 100.0% 60.0%
3884681 292.2.1.10 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N 0.60 42.0 3.68e-01 89.3% 45.3%
3275009 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 49.0 3.84e-01 100.0% 39.2%
5082725 4056.1.1.9 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 0.60 44.0 3.74e-01 82.1% 57.0%
5846 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.59 48.0 3.87e-01 100.0% 44.3%
4235772 243.3.1.11 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Staphopain_pro 0.59 45.0 3.32e-01 85.7% 36.6%
3716046 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.59 47.0 2.80e-01 92.9% 61.2%
3978937 223.1.1.35 a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.59 41.0 2.90e-01 75.0% 22.1%
4000033 220.1.1.119 beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.59 44.0 3.57e-01 91.1% 40.9%
3167877 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.59 49.0 2.81e-01 94.6% 16.0%
3738542 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.59 49.0 2.96e-01 96.4% 74.2%
3399255 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 48.0 3.97e-01 100.0% 86.1%
3996623 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 46.0 4.11e-01 96.4% 61.1%
4674295 223.1.1.43 a+b three layers › Profilin-like › sensor domains › sensor domains › CusS 0.58 38.0 2.75e-01 73.2% 21.7%
4028300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 45.0 3.64e-01 91.1% 44.5%
4028419 508.1.1.1 a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 0.56 40.0 2.86e-01 76.8% 53.9%
3923711 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.55 44.0 3.29e-01 100.0% 32.0%
3367547 844.1.1.4 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.54 45.0 3.16e-01 94.6% 99.0%
4560015 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.54 40.0 3.68e-01 80.4% 84.0%
5052316 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.54 47.0 3.28e-01 98.2% 86.4%
3587662 330.18.1.0 a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA6 › Anti-CRISPR protein AcrIIA6 0.54 44.0 3.89e-01 96.4% 62.2%
4028087 2484.1.1.20 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.53 43.0 3.01e-01 96.4% 28.8%
3947018 223.1.1.43 a+b three layers › Profilin-like › sensor domains › sensor domains › CusS 0.53 38.0 2.73e-01 78.6% 29.5%
2885136 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.53 45.0 2.67e-01 100.0% 19.5%
4025597 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.53 43.0 3.58e-01 91.1% 95.0%
4932126 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.53 36.0 2.86e-01 76.8% 80.0%
3680490 216.1.1.1 a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.52 37.0 2.91e-01 78.6% 32.6%
3818015 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.52 42.0 2.99e-01 91.1% 63.2%
5019615 213.1.1.26 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_4 0.52 38.0 2.79e-01 78.6% 51.5%
4011270 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.52 41.0 3.59e-01 100.0% 69.5%
1388517 11.4.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 0.52 43.0 3.32e-01 96.4% 77.7%
3635930 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 36.0 2.69e-01 73.2% 27.1%
5038693 213.1.1.17 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 0.52 42.0 2.88e-01 89.3% 88.5%
11063 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 35.0 2.61e-01 71.4% 29.7%
4011394 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.52 42.0 3.07e-01 100.0% 61.5%
3827309 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.52 43.0 3.79e-01 100.0% 82.2%
3271192 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.51 43.0 2.61e-01 94.6% 28.7%
5040512 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 34.0 2.22e-01 75.0% 13.5%
D2 high residues 85-183
PDB
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kd1A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.89 75.0 6.96e-01 100.0% 72.9%
2khvA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.87 70.0 7.48e-01 98.0% 97.6%
2kj9A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.85 68.0 6.39e-01 100.0% 71.2%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.76 60.0 6.36e-01 97.0% 94.2%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.55 47.0 4.64e-01 100.0% 92.3%
6at7B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.54 44.0 4.34e-01 100.0% 86.0%
6pnjL00 1.20.1240.10 Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI 0.52 38.0 3.30e-01 76.8% 69.2%
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 37.0 3.23e-01 73.7% 49.7%
4g1uD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.00e-01 99.0% 32.3%
5ao2B02 3.30.70.2760 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 35.0 3.70e-01 99.0% 79.8%
2px0A01 1.20.120.1380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain 0.51 35.0 4.02e-01 97.0% 98.6%
1gs0A01 1.20.142.10 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain 0.50 41.0 3.83e-01 89.9% 77.5%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.50 41.0 4.05e-01 90.9% 100.0%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 42.0 4.10e-01 92.9% 81.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948596 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.93 76.0 7.14e-01 100.0% 73.0%
4437317 186.1.1.5 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.92 74.0 7.27e-01 100.0% 78.1%
4034068 186.1.1.5 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.92 75.0 7.56e-01 99.0% 84.0%
3965042 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.88 72.0 6.84e-01 100.0% 73.9%
3979101 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.88 74.0 6.86e-01 100.0% 72.5%
3946029 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.88 72.0 6.79e-01 100.0% 73.9%
4007795 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.87 72.0 6.77e-01 100.0% 73.9%
3588173 186.1.1.5 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.87 79.0 7.65e-01 98.0% 87.3%
3978543 186.1.1.8 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.85 67.0 6.51e-01 100.0% 74.5%
3946053 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.84 69.0 6.24e-01 100.0% 66.2%
3947779 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.82 65.0 6.30e-01 100.0% 75.5%
4362692 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 68.0 6.84e-01 96.0% 87.0%
4173849 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.79 65.0 6.24e-01 99.0% 77.3%
4998700 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.72 62.0 5.76e-01 96.0% 74.4%
3199996 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.65 51.0 4.77e-01 85.9% 71.8%
3958228 4033.1.1.0 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like 0.61 37.0 3.52e-01 71.7% 50.0%
5002992 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.59 42.0 3.42e-01 74.7% 63.7%
3483128 592.4.1.0 alpha arrays › PWI domain-like › Repetitive domains of egg case silk protein TuSp1 › Repetitive domains of egg case silk protein TuSp1 0.55 47.0 3.72e-01 100.0% 48.3%
3730144 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.53 46.0 3.85e-01 100.0% 73.9%
4423640 5059.1.1.5 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA 0.52 46.0 3.21e-01 100.0% 50.1%
3350604 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.52 31.0 3.17e-01 78.8% 60.0%
3994619 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.51 39.0 2.71e-01 82.8% 56.3%
3218104 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.51 46.0 4.26e-01 100.0% 82.4%
D3 high residues 219-349_372-395
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 31.8 1.70e-07 83.9% 57.6%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.85 83.0 7.14e-01 100.0% 86.0%
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 71.0 6.70e-01 95.5% 81.6%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.77 74.0 6.53e-01 100.0% 91.5%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.77 73.0 7.03e-01 100.0% 94.2%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.76 65.0 6.33e-01 100.0% 81.2%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.75 71.0 6.48e-01 100.0% 90.7%
1ae9A00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.73 67.0 6.45e-01 95.5% 88.9%
1floC02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.70 64.0 5.30e-01 97.4% 68.1%
4acoA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.67 61.0 4.59e-01 96.1% 53.5%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3954716 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 72.0 7.61e-01 84.5% 92.1%
5016981 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 61.0 6.90e-01 84.5% 90.0%
3589779 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 72.0 7.41e-01 84.5% 94.0%
3957659 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 69.0 7.44e-01 84.5% 92.6%
4659012 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 72.0 7.50e-01 84.5% 94.5%
5010452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 60.0 7.06e-01 84.5% 97.3%
3587110 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 72.0 7.34e-01 84.5% 88.7%
4973226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 60.0 6.87e-01 84.5% 90.8%
3278982 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.87 61.0 6.61e-01 71.0% 100.0%
3587374 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 71.0 6.94e-01 84.5% 91.5%
5030307 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 62.0 6.85e-01 84.5% 90.4%
5035582 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 58.0 6.73e-01 84.5% 92.2%
4966682 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 7.05e-01 84.5% 97.4%
5072041 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 6.64e-01 84.5% 86.2%
5028332 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 6.76e-01 84.5% 89.6%
3588110 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 71.0 7.46e-01 84.5% 95.7%
4964228 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 6.58e-01 84.5% 83.7%
4004773 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 6.83e-01 84.5% 90.4%
1267972 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 70.0 7.06e-01 84.5% 97.5%
4975762 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 62.0 6.91e-01 84.5% 92.0%
5029991 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 60.0 6.68e-01 84.5% 88.8%
4034079 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 67.0 7.17e-01 81.3% 91.9%
4981577 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 61.0 6.74e-01 84.5% 89.6%
4949702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 58.0 6.52e-01 83.2% 88.3%
4961948 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.85 59.0 6.71e-01 84.5% 90.8%
5037644 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 59.0 6.62e-01 84.5% 90.0%
4979786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 58.0 6.61e-01 84.5% 90.0%
3588206 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 70.0 7.15e-01 84.5% 88.7%
5057283 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 62.0 6.68e-01 84.5% 85.9%
5058465 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 59.0 6.51e-01 84.5% 87.2%
5054951 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 62.0 6.79e-01 84.5% 90.0%
5083074 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 69.0 7.04e-01 84.5% 91.3%
4137254 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 69.0 6.92e-01 84.5% 91.0%
4007744 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 80.0 7.16e-01 100.0% 90.2%
4446668 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 69.0 7.22e-01 84.5% 98.6%
5030401 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 62.0 6.68e-01 84.5% 87.4%
4253165 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 62.0 6.51e-01 84.5% 83.6%
3289618 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 68.0 6.88e-01 84.5% 94.2%
4357768 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 60.0 6.56e-01 84.5% 87.7%
3589594 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 68.0 6.85e-01 84.5% 88.4%
4122043 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 60.0 6.76e-01 84.5% 95.0%
4932090 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 61.0 6.73e-01 84.5% 93.6%
4031846 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 62.0 6.86e-01 84.5% 95.2%
4947463 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 54.0 6.46e-01 84.5% 98.1%
4933965 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 60.0 6.66e-01 84.5% 93.6%
3955689 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 52.0 6.33e-01 83.2% 99.0%
5003452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 62.0 6.73e-01 84.5% 93.8%
5083877 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 60.0 6.41e-01 84.5% 86.7%
4093657 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 62.0 6.60e-01 84.5% 89.6%
4997941 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 76.0 6.71e-01 98.1% 83.3%
4028841 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 61.0 6.59e-01 84.5% 89.6%
4278298 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 61.0 6.60e-01 84.5% 89.6%
3586881 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 65.0 6.67e-01 84.5% 92.7%
4965640 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 74.0 6.36e-01 97.4% 84.3%
4940128 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 61.0 6.79e-01 84.5% 97.6%
4969226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 59.0 6.29e-01 84.5% 86.7%
5073434 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 74.0 6.71e-01 97.4% 84.5%
5028306 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 76.0 7.18e-01 100.0% 88.3%
4153666 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 60.0 6.40e-01 84.5% 88.9%
5061203 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 76.0 6.98e-01 100.0% 84.2%
5052502 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 60.0 6.46e-01 84.5% 90.4%
5002702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 75.0 6.94e-01 100.0% 82.6%
4071300 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 63.0 6.71e-01 84.5% 94.8%
4940211 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 75.0 7.25e-01 100.0% 92.4%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 74.0 6.98e-01 100.0% 85.0%
5080069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 58.0 6.54e-01 84.5% 98.3%
4964439 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 74.0 6.56e-01 100.0% 87.4%
4004713 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 61.0 6.57e-01 87.7% 92.6%
5058518 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 72.0 6.63e-01 97.4% 83.1%
4998614 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 72.0 6.38e-01 97.4% 87.1%
4940634 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.77 57.0 5.88e-01 83.9% 80.7%
4934137 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 63.0 6.32e-01 84.5% 84.5%
3291526 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.77 63.0 5.99e-01 84.5% 88.0%
4966027 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 73.0 6.83e-01 100.0% 84.2%
5000880 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 72.0 6.80e-01 100.0% 85.0%
4928138 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.76 71.0 6.48e-01 98.7% 95.5%
4453818 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 65.0 6.63e-01 94.2% 91.3%
4961786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 60.0 6.16e-01 84.5% 85.3%
3942380 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.76 62.0 6.02e-01 84.5% 81.5%
4954640 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.75 70.0 6.38e-01 97.4% 84.8%
4042318 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 59.0 6.30e-01 84.5% 92.6%
3271483 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 67.0 6.26e-01 100.0% 94.2%
5011490 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 56.0 5.76e-01 84.5% 88.7%
3251731 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.69 55.0 5.59e-01 84.5% 89.0%
3926774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.67 54.0 5.63e-01 84.5% 97.9%
4928148 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.65 61.0 5.91e-01 100.0% 90.5%
D4 medium residues 350-371_396-428
PDB
Domain cluster: representative