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KU958700.1__AMS01610.1__SEA_CHYMERA_51__00051

Bact-Vir

KU958700.1__AMS01610.1__SEA_CHYMERA_51__00051

Identity

Accession:
KU958700 ↗
Kingdom:
phage

Quality

72.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-52
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13384.13 HTH_23 27.9 2.10e-06 84.8% 64.0%
PF08279.19 best HTH_11 29.5 7.70e-07 84.8% 70.9%
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 84.0 6.99e-01 91.3% 58.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 81.0 7.48e-01 89.1% 73.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 88.0 8.27e-01 97.8% 85.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 84.0 7.21e-01 93.5% 64.2%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 83.0 7.19e-01 93.5% 64.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 81.0 6.72e-01 91.3% 56.0%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 83.0 6.68e-01 93.5% 53.8%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 80.0 7.18e-01 91.3% 70.5%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 79.0 6.78e-01 91.3% 60.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 80.0 7.34e-01 91.3% 72.4%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.93 76.0 7.17e-01 89.1% 74.1%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 81.0 7.14e-01 93.5% 69.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 77.0 6.84e-01 91.3% 67.2%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.92 79.0 5.42e-01 93.5% 31.2%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 77.0 6.84e-01 91.3% 66.7%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 77.0 6.27e-01 91.3% 55.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.91 78.0 4.95e-01 93.5% 20.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 78.0 6.48e-01 93.5% 56.6%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 76.0 6.72e-01 91.3% 66.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 75.0 5.98e-01 91.3% 48.3%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 73.0 5.95e-01 91.3% 50.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.88 81.0 5.72e-01 100.0% 36.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.88 74.0 6.98e-01 93.5% 76.8%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.88 78.0 5.85e-01 100.0% 42.2%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 72.0 5.79e-01 89.1% 48.2%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 73.0 6.67e-01 93.5% 70.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 73.0 5.78e-01 93.5% 47.2%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 73.0 7.18e-01 97.8% 85.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 69.0 6.76e-01 87.0% 84.0%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 74.0 6.60e-01 93.5% 73.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 70.0 7.12e-01 93.5% 91.1%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.86 71.0 5.04e-01 91.3% 32.8%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 70.0 5.19e-01 93.5% 63.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 69.0 5.55e-01 91.3% 48.9%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.31e-01 93.5% 70.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.33e-01 93.5% 69.8%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 63.0 6.73e-01 82.6% 100.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 74.0 6.54e-01 100.0% 71.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 72.0 6.81e-01 97.8% 83.6%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 73.0 5.16e-01 97.8% 41.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 69.0 6.51e-01 93.5% 94.5%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.39e-01 97.8% 75.8%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 68.0 5.24e-01 95.7% 44.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.42e-01 100.0% 73.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 6.21e-01 100.0% 70.1%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 70.0 6.80e-01 97.8% 88.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 68.0 6.46e-01 100.0% 80.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 6.74e-01 100.0% 87.0%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.60e-01 95.7% 70.4%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.25e-01 95.7% 94.7%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.89e-01 100.0% 68.1%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.79 63.0 4.34e-01 89.1% 54.8%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 66.0 5.41e-01 95.7% 63.5%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.78 64.0 5.05e-01 93.5% 45.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.49e-01 97.8% 92.0%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 6.22e-01 100.0% 77.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 5.70e-01 97.8% 66.7%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.47e-01 95.7% 67.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.77 69.0 4.27e-01 100.0% 19.5%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.35e-01 95.7% 69.0%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.52e-01 100.0% 29.8%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.80e-01 97.8% 77.3%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 59.0 5.91e-01 84.8% 100.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.41e-01 100.0% 60.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.65e-01 97.8% 38.0%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.64e-01 100.0% 68.5%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.73e-01 100.0% 61.6%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.04e-01 97.8% 52.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.42e-01 95.7% 73.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.49e-01 100.0% 53.3%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 63.0 5.52e-01 95.7% 65.7%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.28e-01 100.0% 56.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.01e-01 100.0% 47.1%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 61.0 6.27e-01 95.7% 97.7%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.74 63.0 5.07e-01 100.0% 50.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 4.43e-01 100.0% 37.1%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.68e-01 97.8% 74.6%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.65e-01 97.8% 70.3%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 62.0 4.23e-01 100.0% 32.8%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.47e-01 100.0% 69.3%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 4.56e-01 100.0% 36.4%
2o7tA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 60.0 4.09e-01 100.0% 32.4%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 5.02e-01 91.3% 61.8%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.64e-01 97.8% 75.9%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.33e-01 100.0% 36.3%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.39e-01 100.0% 69.7%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.71 62.0 4.04e-01 100.0% 66.8%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.75e-01 100.0% 47.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 58.0 5.19e-01 91.3% 67.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.10e-01 100.0% 72.5%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.50e-01 100.0% 78.5%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 55.0 4.43e-01 84.8% 78.0%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 50.0 5.17e-01 91.3% 90.2%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.67 50.0 5.10e-01 89.1% 84.8%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928483 101.1.3.36 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_23 0.99 92.0 6.74e-01 97.8% 43.7%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 87.0 8.07e-01 93.5% 78.2%
3972272 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.98 84.0 6.92e-01 91.3% 56.0%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 84.0 8.15e-01 91.3% 84.0%
3971414 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 84.0 7.54e-01 91.3% 70.0%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.97 84.0 7.29e-01 91.3% 64.6%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 91.0 6.44e-01 100.0% 38.3%
3941460 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 83.0 7.24e-01 91.3% 64.6%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.96 90.0 6.37e-01 100.0% 39.2%
4071326 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.96 85.0 6.84e-01 93.5% 53.8%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.96 85.0 7.17e-01 93.5% 61.4%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.96 89.0 8.17e-01 100.0% 82.5%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.95 84.0 7.53e-01 93.5% 71.7%
4624269 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 87.0 7.90e-01 100.0% 76.7%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.95 88.0 6.50e-01 100.0% 43.8%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.95 83.0 7.23e-01 93.5% 66.2%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.94 82.0 7.96e-01 93.5% 86.0%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.94 88.0 7.67e-01 100.0% 81.5%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.94 82.0 5.27e-01 93.5% 23.9%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.94 82.0 6.48e-01 93.5% 50.6%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 83.0 7.50e-01 100.0% 73.3%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.93 83.0 8.12e-01 97.8% 92.0%
4986612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.92 74.0 7.54e-01 87.0% 86.7%
5078377 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 80.0 7.81e-01 93.5% 86.0%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 83.0 7.75e-01 100.0% 81.8%
3953111 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 84.0 7.21e-01 100.0% 67.1%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.92 83.0 7.07e-01 100.0% 64.3%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.92 83.0 7.07e-01 97.8% 64.3%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 79.0 6.94e-01 93.5% 66.2%
3619451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 79.0 6.94e-01 95.7% 66.2%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.91 78.0 7.07e-01 93.5% 71.7%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 76.0 5.86e-01 93.5% 44.2%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 74.0 7.57e-01 89.1% 91.1%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.90 69.0 7.40e-01 84.8% 100.0%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 7.90e-01 95.7% 95.6%
5052610 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.89 73.0 6.67e-01 89.1% 71.7%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.89 77.0 7.83e-01 93.5% 95.6%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 80.0 6.84e-01 100.0% 64.3%
5070354 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 79.0 6.48e-01 97.8% 56.2%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 80.0 7.22e-01 100.0% 75.0%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 73.0 5.98e-01 91.3% 51.2%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.88 81.0 5.74e-01 100.0% 36.8%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.88 71.0 7.57e-01 89.1% 100.0%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.88 76.0 6.06e-01 95.7% 50.6%
4929382 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 76.0 7.16e-01 97.8% 80.0%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 80.0 7.80e-01 100.0% 92.0%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 78.0 6.61e-01 100.0% 61.3%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 81.0 6.09e-01 100.0% 50.0%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 75.0 7.01e-01 93.5% 78.2%
3287536 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 78.0 7.87e-01 97.8% 100.0%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 77.0 7.22e-01 100.0% 81.8%
3589192 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.87 75.0 6.18e-01 95.7% 83.7%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 74.0 6.71e-01 93.5% 71.7%
5003692 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.86 76.0 6.73e-01 97.8% 69.2%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 74.0 6.72e-01 93.5% 73.3%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 73.0 7.11e-01 95.7% 86.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 77.0 7.25e-01 100.0% 85.5%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 77.0 5.99e-01 100.0% 50.5%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.85 73.0 6.92e-01 95.7% 94.5%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 69.0 7.02e-01 91.3% 91.1%
5004314 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 73.0 6.24e-01 97.8% 60.0%
4970998 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.84 76.0 5.80e-01 100.0% 52.0%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 76.0 7.40e-01 100.0% 92.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 73.0 6.92e-01 97.8% 81.8%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 73.0 7.39e-01 97.8% 97.8%
4653037 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 72.0 5.35e-01 100.0% 38.3%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 74.0 7.01e-01 100.0% 89.1%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 6.88e-01 87.0% 100.0%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 75.0 6.60e-01 100.0% 69.2%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.83 75.0 6.60e-01 100.0% 70.8%
3256356 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 6.05e-01 91.3% 67.2%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 74.0 6.54e-01 100.0% 72.3%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 69.0 5.95e-01 93.5% 73.2%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.82 73.0 6.35e-01 100.0% 67.1%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 70.0 6.35e-01 95.7% 71.7%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.82 69.0 6.98e-01 97.8% 97.8%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.81 71.0 6.02e-01 97.8% 61.3%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 6.20e-01 100.0% 76.4%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.81 69.0 6.32e-01 95.7% 78.3%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.80 70.0 5.54e-01 100.0% 48.4%
3589364 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 71.0 5.04e-01 100.0% 35.6%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.80 71.0 6.30e-01 100.0% 70.8%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 68.0 6.08e-01 100.0% 69.2%
5071227 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.78 67.0 4.06e-01 95.7% 20.7%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 67.0 6.62e-01 100.0% 98.0%
3973615 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.78 70.0 6.13e-01 97.8% 72.3%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 65.0 5.52e-01 100.0% 56.2%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 67.0 5.33e-01 100.0% 53.7%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.77 68.0 4.18e-01 100.0% 18.7%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 64.0 6.00e-01 100.0% 78.3%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 67.0 5.86e-01 100.0% 71.4%
4998375 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.44e-01 100.0% 55.3%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.76 65.0 5.96e-01 95.7% 75.0%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 59.0 6.22e-01 91.3% 100.0%
5055780 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 56.0 5.86e-01 93.5% 97.5%
4996857 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 6.05e-01 100.0% 78.0%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 61.0 5.89e-01 100.0% 83.6%
3920862 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.73 64.0 6.26e-01 100.0% 94.0%
3968724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 56.0 4.92e-01 93.5% 69.3%
D2 medium residues 103-140
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nleA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.81 66.0 5.27e-01 94.7% 46.1%
3veaA02 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.77 67.0 6.11e-01 100.0% 78.8%
2l8tB01 6.10.130.40 Special › Helix non-globular › GTP Cyclohydrolase I; Chain A, domain 1 › 0.72 53.0 5.34e-01 81.6% 84.2%
1uaaA04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.70 61.0 3.95e-01 97.4% 26.5%
4bs9A01 3.90.930.60 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.66 50.0 3.77e-01 84.2% 81.1%