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KX011028.1__ANH50525.1__X__00114

Bact-Vir

KX011028.1__ANH50525.1__X__00114

Identity

Accession:
KX011028 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-115
PDB
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r3pB00 3.40.960.10 Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease 0.84 68.0 7.02e-01 100.0% 90.8%
1vsrA00 3.40.960.10 Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease 0.78 73.0 6.66e-01 100.0% 85.1%
4dapA02 3.40.1350.60 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.72 65.0 5.65e-01 96.2% 96.7%
2p4dA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.71 37.0 3.20e-01 82.7% 32.5%
3o03A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 61.0 4.62e-01 100.0% 82.7%
4e3zB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 60.0 4.65e-01 100.0% 88.6%
8eh2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 59.0 4.51e-01 100.0% 84.5%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.52e-01 100.0% 87.0%
4fdaA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.54e-01 100.0% 94.2%
3drwB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 59.0 4.18e-01 100.0% 94.0%
3u9lA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 4.32e-01 100.0% 80.4%
1khtB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 4.81e-01 100.0% 93.2%
7e24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 56.0 4.36e-01 99.0% 89.1%
3rkuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 57.0 4.26e-01 100.0% 81.7%
1di0A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.64 57.0 5.09e-01 100.0% 83.1%
4c1bA02 3.40.50.12700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 47.0 4.76e-01 77.9% 94.2%
4rshA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 57.0 4.82e-01 100.0% 94.9%
1c41A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.63 57.0 4.91e-01 100.0% 75.8%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 56.0 4.58e-01 100.0% 90.1%
5if3B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 49.0 3.94e-01 83.7% 79.9%
3dciA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 55.0 4.48e-01 100.0% 94.7%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 45.0 4.04e-01 76.0% 55.7%
1cz1A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 50.0 3.40e-01 86.5% 87.1%
2xb4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 55.0 4.32e-01 99.0% 93.7%
3fovA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.60 51.0 5.21e-01 98.1% 94.1%
4q34A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 53.0 3.79e-01 100.0% 83.8%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.59 46.0 3.64e-01 83.7% 58.0%
4zo4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 54.0 4.31e-01 100.0% 91.0%
2a1fC00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.59 44.0 3.37e-01 77.9% 64.6%
2ewfA03 3.40.91.50 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.59 52.0 4.09e-01 99.0% 78.7%
4q1tB01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.59 51.0 3.91e-01 97.1% 83.6%
1kgdA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.86e-01 100.0% 87.0%
3f2bA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 52.0 3.93e-01 99.0% 98.4%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 45.0 3.83e-01 84.6% 67.8%
4p02A02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 46.0 3.59e-01 87.5% 40.5%
4eadA02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.58 51.0 4.01e-01 100.0% 69.9%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.57 46.0 4.06e-01 86.5% 84.2%
2derB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 46.0 3.70e-01 87.5% 57.1%
3k93A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.57 49.0 3.92e-01 98.1% 57.0%
7bobA02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.56 51.0 4.13e-01 100.0% 86.9%
1d8wC00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.56 48.0 3.27e-01 95.2% 67.3%
7q1bA01 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.56 49.0 3.41e-01 100.0% 89.9%
1kk1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.08e-01 100.0% 89.3%
4nf7A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 46.0 3.26e-01 92.3% 83.7%
3a4lB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.15e-01 100.0% 84.8%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 42.0 3.02e-01 80.8% 80.9%
4z9nA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 35.0 3.56e-01 92.3% 64.1%
4h18A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 48.0 3.51e-01 99.0% 74.9%
1q0sA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 49.0 4.36e-01 98.1% 95.2%
5mv0A01 3.30.70.2640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Arenavirus RNA polymerase 0.54 42.0 4.50e-01 82.7% 100.0%
1pyoC00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 41.0 3.63e-01 82.7% 62.1%
3g1wA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 48.0 4.31e-01 100.0% 74.5%
6ecaA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 45.0 3.29e-01 96.2% 92.7%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 4.18e-01 91.3% 85.5%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 39.0 4.27e-01 83.7% 96.5%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.53 41.0 3.97e-01 82.7% 79.1%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 46.0 3.62e-01 97.1% 83.1%
1oi2A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.52 46.0 3.92e-01 99.0% 68.2%
4c0rA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 34.0 3.47e-01 97.1% 66.7%
1xmtA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 4.26e-01 82.7% 92.6%
2gm3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 39.0 3.54e-01 82.7% 69.3%
6n2aB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.52 44.0 3.44e-01 95.2% 88.0%
5dn8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 45.0 3.94e-01 100.0% 90.8%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.64e-01 96.2% 81.7%
3wzlA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 44.0 3.36e-01 100.0% 86.4%
6yuqA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 42.0 3.28e-01 94.2% 96.3%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3258001 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.84 77.0 6.92e-01 98.1% 91.4%
5080733 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.82 77.0 7.08e-01 100.0% 85.4%
3163838 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.80 67.0 6.49e-01 100.0% 80.9%
4030733 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 67.0 6.78e-01 100.0% 92.3%
5069856 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.77 69.0 6.65e-01 99.0% 87.0%
5056125 2008.1.1.14 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.76 70.0 6.49e-01 100.0% 85.4%
3953988 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 65.0 6.52e-01 100.0% 91.4%
3953141 2008.1.1.121 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 0.76 66.0 6.64e-01 100.0% 93.3%
4027358 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.76 66.0 6.22e-01 100.0% 78.4%
4995722 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 66.0 6.77e-01 100.0% 99.0%
3958985 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 65.0 6.65e-01 100.0% 97.0%
3959070 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 64.0 5.68e-01 100.0% 64.7%
4927469 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.74 68.0 6.42e-01 100.0% 84.0%
4028819 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.74 66.0 6.58e-01 100.0% 94.3%
4026799 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.74 67.0 6.44e-01 100.0% 87.8%
4027449 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.74 67.0 6.72e-01 100.0% 97.1%
3673147 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.74 65.0 6.35e-01 100.0% 87.0%
4027159 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.74 67.0 6.52e-01 100.0% 88.7%
3808239 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.73 65.0 6.65e-01 100.0% 99.0%
4954232 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 54.0 6.03e-01 79.8% 98.8%
3278386 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 66.0 6.15e-01 100.0% 80.0%
4026721 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 62.0 6.32e-01 100.0% 97.0%
4025795 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.71 65.0 6.02e-01 100.0% 87.7%
4271425 2008.1.1.81 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2726 0.70 64.0 5.52e-01 100.0% 68.8%
4030490 2008.1.1.124 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF6831 0.70 64.0 6.46e-01 99.0% 99.0%
4026598 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.70 64.0 6.19e-01 100.0% 91.3%
3262617 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.70 54.0 5.33e-01 82.7% 100.0%
4946865 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.68 60.0 5.93e-01 94.2% 99.1%
3610413 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 61.0 4.58e-01 100.0% 48.4%
3565175 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.67 60.0 4.49e-01 100.0% 91.2%
3883210 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.67 60.0 4.78e-01 100.0% 90.5%
3457522 2004.1.1.41 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK 0.66 60.0 4.60e-01 100.0% 87.2%
3773669 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.66 59.0 4.60e-01 100.0% 91.7%
5057713 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.66 60.0 5.60e-01 100.0% 90.6%
4938056 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.65 58.0 4.45e-01 100.0% 83.7%
4946571 2008.1.1.85 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII 0.65 58.0 4.69e-01 100.0% 62.0%
4979146 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.65 59.0 5.09e-01 100.0% 79.4%
4352698 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.65 58.0 4.12e-01 100.0% 95.6%
5008595 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.64 58.0 4.83e-01 100.0% 87.2%
3583171 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 51.0 4.38e-01 85.6% 80.0%
3412801 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.64 53.0 4.47e-01 89.4% 86.5%
None 0.64 57.0 4.06e-01 100.0% 95.9%
4989892 7592.1.1.5 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF 0.63 51.0 3.59e-01 85.6% 45.1%
4928402 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 56.0 5.46e-01 100.0% 98.3%
4956304 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 54.0 4.41e-01 97.1% 67.5%
3969697 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 55.0 4.82e-01 97.1% 65.8%
5040424 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.62 55.0 4.48e-01 98.1% 79.5%
None 0.62 54.0 3.86e-01 98.1% 89.4%
4385057 2004.1.1.41 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK 0.61 54.0 4.50e-01 100.0% 92.1%
4076693 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.61 54.0 5.23e-01 98.1% 87.0%
3433332 2004.1.1.41 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK 0.61 55.0 4.13e-01 100.0% 84.8%
3369305 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.60 55.0 4.20e-01 100.0% 67.7%
4332382 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.60 54.0 5.19e-01 98.1% 85.7%
3166390 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 52.0 4.57e-01 95.2% 89.0%
5079137 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.60 52.0 4.77e-01 99.0% 95.0%
4141864 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.60 53.0 5.14e-01 98.1% 92.4%
4468301 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.60 54.0 5.13e-01 98.1% 93.3%
4311371 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.60 53.0 5.05e-01 97.1% 89.2%
4313486 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.60 53.0 4.71e-01 97.1% 95.9%
4670642 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.59 52.0 5.10e-01 98.1% 88.5%
4060516 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.59 52.0 5.11e-01 98.1% 91.3%
4394279 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.59 52.0 4.98e-01 98.1% 89.2%
4109165 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.59 52.0 4.99e-01 98.1% 88.3%
3979568 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 52.0 4.56e-01 99.0% 81.3%
4306163 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.58 51.0 5.00e-01 98.1% 87.8%
4534629 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.58 51.0 4.93e-01 98.1% 92.5%
3954245 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.57 51.0 4.93e-01 98.1% 94.9%
136966 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 49.0 3.92e-01 98.1% 57.0%
3438965 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 45.0 4.60e-01 84.6% 94.0%
4875091 2003.1.4.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2_2 0.56 50.0 3.66e-01 98.1% 88.1%
4009305 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.55 43.0 3.63e-01 81.7% 80.0%
3478500 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 46.0 3.73e-01 93.3% 91.0%
3261893 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.55 41.0 3.94e-01 95.2% 68.3%
2636825 2007.15.1.1 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Rib_hydrolayse 0.55 46.0 3.51e-01 93.3% 67.1%
4928460 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.54 45.0 3.91e-01 93.3% 81.8%
None 0.54 46.0 2.62e-01 96.2% 12.5%
4490768 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 44.0 2.49e-01 89.4% 8.7%
3834388 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 42.0 3.34e-01 84.6% 40.0%
4663092 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.53 45.0 3.99e-01 95.2% 89.7%
4573327 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.52 44.0 3.89e-01 94.2% 90.6%
3803366 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.52 42.0 3.68e-01 87.5% 58.7%
3352161 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.52 43.0 3.45e-01 94.2% 60.4%
4114093 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.52 43.0 4.03e-01 93.3% 94.1%
4959831 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.52 41.0 3.86e-01 86.5% 73.1%
4946702 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 45.0 3.24e-01 99.0% 74.3%
4668788 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.52 40.0 3.79e-01 86.5% 70.1%
4992747 2007.22.1.1 a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D › FlpD 0.51 40.0 3.99e-01 81.7% 86.7%
4529151 3949.1.1.1 alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT 0.51 44.0 3.47e-01 99.0% 88.8%
4659593 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.50 43.0 4.00e-01 98.1% 91.4%
D2 medium residues 130-171
PDB
Domain cluster: representative
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 80.0 7.33e-01 95.2% 74.1%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 76.0 6.44e-01 92.9% 60.6%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 78.0 7.42e-01 100.0% 83.3%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 75.0 7.00e-01 97.6% 82.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 73.0 6.70e-01 97.6% 73.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 66.0 6.04e-01 85.7% 64.3%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 73.0 7.16e-01 95.2% 88.9%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 73.0 6.24e-01 100.0% 61.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.85 72.0 5.11e-01 97.6% 32.5%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 69.0 6.55e-01 92.9% 78.4%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 64.0 5.74e-01 83.3% 60.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 68.0 5.03e-01 100.0% 36.2%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 6.27e-01 100.0% 65.6%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 68.0 5.44e-01 92.9% 47.1%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 62.0 6.58e-01 83.3% 100.0%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.83 71.0 6.06e-01 97.6% 61.8%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.83 70.0 5.31e-01 97.6% 45.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 71.0 6.60e-01 100.0% 83.6%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 5.88e-01 95.2% 60.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.59e-01 100.0% 50.0%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.89e-01 100.0% 62.5%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 68.0 4.30e-01 100.0% 19.4%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 65.0 6.58e-01 90.5% 97.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.80 65.0 6.02e-01 95.2% 73.2%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.42e-01 100.0% 50.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.51e-01 100.0% 55.7%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 6.09e-01 97.6% 72.9%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.81e-01 100.0% 61.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.46e-01 100.0% 53.3%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.35e-01 100.0% 52.6%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.83e-01 100.0% 69.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.63e-01 100.0% 63.5%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.47e-01 100.0% 56.9%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 60.0 6.02e-01 92.9% 93.2%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 4.66e-01 85.7% 42.4%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.65e-01 100.0% 64.2%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.06e-01 90.5% 50.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.38e-01 83.3% 74.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 62.0 4.92e-01 100.0% 50.0%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 4.58e-01 85.7% 45.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.67e-01 100.0% 74.1%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 60.0 4.70e-01 100.0% 53.4%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.22e-01 90.5% 65.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.60e-01 100.0% 39.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.15e-01 100.0% 55.3%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.79e-01 100.0% 46.0%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.62e-01 100.0% 76.9%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.25e-01 100.0% 62.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.70e-01 100.0% 46.0%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.04e-01 100.0% 52.6%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.36e-01 97.6% 68.8%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.72 61.0 4.18e-01 100.0% 53.5%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.61e-01 100.0% 74.5%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.27e-01 95.2% 67.7%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 4.23e-01 100.0% 29.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.90e-01 92.9% 58.9%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.43e-01 100.0% 42.7%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.17e-01 95.2% 62.1%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 4.40e-01 100.0% 36.4%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 52.0 4.18e-01 81.0% 42.9%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.65e-01 97.6% 82.0%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.02e-01 97.6% 56.2%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.62e-01 100.0% 46.6%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.51e-01 100.0% 44.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 59.0 5.06e-01 100.0% 62.9%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 61.0 3.88e-01 100.0% 22.4%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 50.0 4.11e-01 78.6% 48.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.08e-01 100.0% 59.7%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.10e-01 100.0% 33.1%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 53.0 5.27e-01 90.5% 84.8%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.89e-01 95.2% 61.2%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 4.01e-01 100.0% 28.8%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 3.73e-01 95.2% 29.3%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.56e-01 100.0% 51.8%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.66 48.0 4.92e-01 90.5% 85.4%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 3.96e-01 100.0% 38.4%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 4.00e-01 100.0% 38.3%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.95e-01 97.6% 84.2%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.46e-01 97.6% 68.5%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.02e-01 100.0% 45.5%
3c07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 50.0 3.26e-01 95.2% 22.4%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 49.0 4.29e-01 92.9% 77.6%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 49.0 4.05e-01 97.6% 51.7%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 48.0 3.88e-01 97.6% 44.4%
1khyD00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.59 45.0 3.20e-01 81.0% 61.2%
2w9yA00 1.20.120.1100 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 49.0 3.42e-01 100.0% 45.6%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 79.0 8.15e-01 90.5% 95.0%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 83.0 8.49e-01 95.2% 100.0%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 80.0 7.33e-01 95.2% 74.1%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.92 82.0 7.41e-01 97.6% 74.5%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 81.0 7.35e-01 97.6% 76.4%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.91 77.0 6.56e-01 92.9% 60.0%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.90 80.0 5.90e-01 97.6% 41.0%
4945039 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.90 75.0 6.66e-01 92.9% 65.0%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.90 75.0 7.70e-01 92.9% 97.5%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 76.0 6.74e-01 92.9% 66.1%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 76.0 7.46e-01 92.9% 86.7%
4976095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.90 69.0 6.30e-01 83.3% 63.6%
4961899 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 80.0 6.88e-01 100.0% 66.2%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 74.0 7.30e-01 92.9% 86.7%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 74.0 7.28e-01 92.9% 86.7%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 6.45e-01 92.9% 60.0%
3590303 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.89 74.0 6.05e-01 92.9% 52.0%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 75.0 6.82e-01 92.9% 72.7%
5074940 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.89 75.0 6.80e-01 92.9% 72.7%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.88 76.0 5.43e-01 97.6% 34.2%
5061884 101.1.2.887 alpha arrays › HTH › HTH › winged helix domain › DUF1670 0.88 78.0 5.17e-01 100.0% 38.1%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.88 76.0 7.24e-01 97.6% 82.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 73.0 6.66e-01 92.9% 72.7%
5022370 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.88 71.0 5.74e-01 92.9% 47.5%
4939690 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.88 80.0 5.90e-01 100.0% 55.0%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.87 72.0 6.85e-01 92.9% 78.0%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 73.0 6.27e-01 92.9% 60.0%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.87 72.0 7.10e-01 95.2% 86.7%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.87 74.0 5.73e-01 95.2% 44.4%
4998605 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.87 76.0 5.58e-01 100.0% 56.4%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 72.0 7.05e-01 92.9% 88.9%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 6.02e-01 92.9% 57.1%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.86 73.0 6.87e-01 97.6% 78.8%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.86 74.0 6.52e-01 95.2% 80.0%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 70.0 6.70e-01 92.9% 80.0%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 73.0 6.88e-01 95.2% 80.0%
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 73.0 6.07e-01 100.0% 54.7%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.85 71.0 7.01e-01 95.2% 88.9%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 6.64e-01 100.0% 78.3%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.85 73.0 5.42e-01 97.6% 39.0%
5020331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 77.0 6.57e-01 100.0% 69.2%
3279743 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 72.0 6.04e-01 100.0% 57.1%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.85 72.0 5.12e-01 97.6% 32.8%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.84 75.0 6.00e-01 100.0% 75.0%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 69.0 6.14e-01 92.9% 66.7%
3509592 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 68.0 6.07e-01 92.9% 65.0%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.83 73.0 6.17e-01 100.0% 60.0%
5060563 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.83 73.0 6.18e-01 100.0% 87.1%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.83 68.0 6.41e-01 90.5% 78.0%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.82 66.0 5.14e-01 92.9% 42.1%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 69.0 5.72e-01 100.0% 53.3%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 67.0 5.69e-01 92.9% 70.0%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.81 65.0 6.65e-01 92.9% 95.0%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.17e-01 97.6% 71.7%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 5.83e-01 92.9% 68.3%
3944331 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 66.0 5.34e-01 100.0% 48.8%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 69.0 5.59e-01 100.0% 51.9%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.80 66.0 6.04e-01 92.9% 70.9%
4963467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 65.0 6.38e-01 92.9% 86.7%
5019249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 5.28e-01 95.2% 47.1%
4030763 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 67.0 5.81e-01 100.0% 61.5%
5060818 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 64.0 5.39e-01 95.2% 56.0%
1177545 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 64.0 5.50e-01 100.0% 57.4%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.78 63.0 6.40e-01 92.9% 100.0%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 64.0 6.00e-01 97.6% 74.5%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 65.0 5.35e-01 100.0% 51.2%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 63.0 6.09e-01 97.6% 84.0%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.76 63.0 5.59e-01 92.9% 66.7%
5044655 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 61.0 5.78e-01 95.2% 78.0%
4975588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.59e-01 100.0% 64.6%
5046216 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 65.0 5.94e-01 100.0% 74.5%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.23e-01 100.0% 58.6%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 64.0 5.67e-01 100.0% 68.3%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.73 60.0 3.33e-01 100.0% 8.8%
5076739 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 64.0 4.48e-01 100.0% 31.5%
4958809 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 61.0 4.94e-01 97.6% 48.2%
4927482 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 61.0 5.85e-01 100.0% 82.0%
4501711 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.73 57.0 4.98e-01 92.9% 57.1%
4979451 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.34e-01 100.0% 63.1%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.72 59.0 5.51e-01 100.0% 74.5%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.02e-01 100.0% 53.8%
5035689 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 63.0 5.34e-01 100.0% 60.0%
5054427 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.72 60.0 4.25e-01 100.0% 66.2%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.22e-01 100.0% 60.0%
5009656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.47e-01 100.0% 64.6%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.20e-01 100.0% 63.1%
5076753 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 4.90e-01 100.0% 46.7%
5046349 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 62.0 5.42e-01 100.0% 66.2%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 61.0 5.49e-01 100.0% 70.0%
4926890 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.71 59.0 4.71e-01 100.0% 45.6%
5024733 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 62.0 5.37e-01 100.0% 64.6%
3603007 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 61.0 5.05e-01 100.0% 57.3%
5047333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 4.74e-01 100.0% 46.7%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.44e-01 100.0% 74.5%
3925034 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.29e-01 95.2% 74.5%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 4.61e-01 97.6% 45.6%
4939519 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.69 60.0 4.44e-01 100.0% 38.2%
4994602 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 56.0 5.09e-01 100.0% 68.3%
4933352 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.68 58.0 5.37e-01 100.0% 76.4%
5041695 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.68 59.0 4.99e-01 100.0% 60.0%