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KX077179.1__ANT39900.1__Rhks_29__00029
Bact-VirKX077179.1__ANT39900.1__Rhks_29__00029
Identity
- Accession:
- KX077179 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8e7cA02 | 1.10.1840.10 | Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 | 0.61 | 42.0 | 3.60e-01 | 73.7% | 90.8% |
| 4ottA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.60 | 45.0 | 3.63e-01 | 84.2% | 67.8% |
| 2vd5B02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 45.0 | 3.20e-01 | 84.2% | 82.9% |
| 1w2lA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.58 | 45.0 | 3.80e-01 | 84.2% | 68.0% |
| 4f4oC03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 43.0 | 3.78e-01 | 100.0% | 55.1% |
| 1l5pA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.54 | 45.0 | 3.98e-01 | 100.0% | 93.5% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 46.0 | 4.12e-01 | 98.2% | 86.4% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 40.0 | 2.71e-01 | 86.0% | 53.5% |
| 3ltoA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.50 | 43.0 | 3.05e-01 | 96.5% | 63.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065307 | 2004.1.1.1215 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cdc6_lid | 0.66 | 54.0 | 3.51e-01 | 94.7% | 25.4% |
| 3963812 | 3170.1.1.0 ↗ | a+b two layers › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 › uncharacterized protein YP_926445.1 | 0.63 | 48.0 | 3.86e-01 | 82.5% | 93.6% |
| 3238459 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.60 | 41.0 | 3.96e-01 | 70.2% | 78.5% |
| 4211419 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.58 | 40.0 | 3.20e-01 | 71.9% | 61.7% |
| 4681348 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.58 | 40.0 | 3.34e-01 | 71.9% | 67.0% |
| 3991455 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.57 | 36.0 | 3.66e-01 | 100.0% | 65.5% |
| 3719240 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.57 | 48.0 | 2.94e-01 | 96.5% | 53.0% |
| 5057106 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.56 | 39.0 | 3.46e-01 | 75.4% | 82.2% |
| 3981580 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.55 | 37.0 | 3.84e-01 | 84.2% | 72.7% |
| 4100663 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.55 | 47.0 | 2.91e-01 | 96.5% | 83.0% |
| 3921782 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.52 | 36.0 | 2.41e-01 | 91.2% | 16.2% |
| 3638300 | 220.1.1.95 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH | 0.50 | 42.0 | 3.21e-01 | 94.7% | 92.1% |