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KX077896.1__ANM47700.1__X__00069

Bact-Vir

KX077896.1__ANM47700.1__X__00069

Identity

Accession:
KX077896 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_phiJH1301-2

TaxID: 1860194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-64_196-262
PDB
Domain cluster: rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00085__D194-244_789-849
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.84 76.0 7.64e-01 100.0% 94.5%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.83 78.0 7.52e-01 100.0% 95.7%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.82 71.0 7.20e-01 100.0% 93.5%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.81 76.0 6.78e-01 100.0% 95.3%
1cyyA02 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.69 62.0 6.33e-01 100.0% 97.6%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.68 33.0 4.34e-01 89.8% 82.4%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 33.0 3.71e-01 91.3% 68.4%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 26.0 3.50e-01 85.0% 77.8%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 33.0 3.61e-01 97.6% 65.1%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 34.0 3.90e-01 90.6% 76.0%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.57 26.0 3.62e-01 79.5% 88.3%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 30.0 3.23e-01 82.7% 66.7%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.83e-01 94.5% 80.2%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 37.0 2.95e-01 78.0% 43.1%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590584 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.96 93.0 9.10e-01 100.0% 94.1%
5070755 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.89 80.0 8.24e-01 100.0% 98.3%
5080083 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.89 80.0 8.30e-01 100.0% 100.0%
5064795 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.88 77.0 7.97e-01 100.0% 97.5%
4981103 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.88 79.0 8.00e-01 100.0% 96.0%
5021953 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.88 76.0 8.01e-01 98.4% 100.0%
5003644 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.87 79.0 7.97e-01 100.0% 96.0%
5056966 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.87 75.0 7.74e-01 100.0% 95.8%
5034364 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.86 77.0 7.80e-01 100.0% 95.2%
5029441 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.86 75.0 7.72e-01 100.0% 95.8%
4993088 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.86 77.0 7.95e-01 100.0% 99.2%
4940171 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 73.0 7.62e-01 100.0% 98.3%
4929367 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 76.0 7.86e-01 100.0% 99.2%
3965662 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.85 81.0 7.85e-01 100.0% 95.0%
5055120 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 74.0 7.74e-01 98.4% 100.0%
3939200 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 78.0 7.82e-01 100.0% 94.6%
3701498 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.85 74.0 7.62e-01 100.0% 95.8%
5031820 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 75.0 7.75e-01 100.0% 98.3%
4544551 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.85 74.0 7.62e-01 100.0% 96.7%
3621216 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.85 74.0 7.54e-01 100.0% 93.6%
3472865 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.85 76.0 7.77e-01 100.0% 97.6%
3602503 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.84 75.0 7.75e-01 100.0% 99.2%
3921426 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.84 78.0 7.81e-01 100.0% 95.4%
5029243 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 75.0 7.73e-01 99.2% 99.2%
4031371 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.84 80.0 7.72e-01 100.0% 95.0%
4933037 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 75.0 7.58e-01 100.0% 95.2%
4210460 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 73.0 7.56e-01 100.0% 97.5%
5005180 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 77.0 7.85e-01 100.0% 99.2%
3881440 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 78.0 7.89e-01 100.0% 99.2%
4969403 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 77.0 7.65e-01 100.0% 93.8%
3433312 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 76.0 7.73e-01 100.0% 97.6%
3937610 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 77.0 7.81e-01 99.2% 98.4%
4589827 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 76.0 7.69e-01 100.0% 96.8%
3993280 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.84 76.0 7.74e-01 100.0% 97.6%
3692621 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.83 77.0 7.71e-01 100.0% 95.4%
3398994 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.83 72.0 7.38e-01 100.0% 95.8%
4136946 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.83 79.0 7.28e-01 100.0% 96.1%
4113222 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.83 79.0 7.61e-01 100.0% 97.1%
3705600 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 76.0 7.53e-01 100.0% 94.6%
4027028 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 77.0 7.72e-01 100.0% 96.9%
4459672 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.82 78.0 7.29e-01 100.0% 94.0%
4191459 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 73.0 7.51e-01 100.0% 98.3%
5040494 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 77.0 7.25e-01 100.0% 93.3%
5071482 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 75.0 7.60e-01 100.0% 99.2%
3831913 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.82 77.0 7.58e-01 100.0% 94.8%
3222596 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.81 76.0 7.47e-01 100.0% 93.3%
4936970 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.81 67.0 7.05e-01 100.0% 95.7%
4106730 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.81 77.0 7.52e-01 100.0% 97.0%
3499053 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.81 76.0 7.47e-01 100.0% 94.1%
4318011 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.80 73.0 7.44e-01 100.0% 97.6%
4976527 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.80 74.0 7.52e-01 100.0% 99.2%
4258905 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.80 73.0 7.37e-01 100.0% 96.8%
3388201 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.80 74.0 7.34e-01 100.0% 95.4%
4956007 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.80 60.0 6.52e-01 100.0% 94.3%
5022394 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.79 70.0 7.23e-01 99.2% 98.3%
4971256 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.79 73.0 7.37e-01 100.0% 99.2%
3464474 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.79 74.0 6.90e-01 100.0% 97.4%
5010552 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.79 73.0 7.25e-01 100.0% 96.2%
4558873 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.79 74.0 6.86e-01 100.0% 97.4%
4591470 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.78 74.0 6.92e-01 100.0% 98.0%
3315068 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.76 72.0 6.75e-01 100.0% 98.0%
4954871 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.76 64.0 6.75e-01 100.0% 100.0%
5066122 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.76 48.0 5.80e-01 84.3% 100.0%
5062048 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.74 69.0 6.72e-01 100.0% 97.1%
5030959 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.64 36.0 4.48e-01 85.8% 87.5%
1954221 2.26.1.1 ↗ beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.62 34.0 4.27e-01 78.0% 90.7%
4547854 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 37.0 4.04e-01 86.6% 76.4%
5024241 330.2.1.5 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.55 32.0 3.69e-01 88.2% 76.8%
4968392 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.55 33.0 3.74e-01 91.3% 77.0%
5069695 330.2.1.5 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.55 33.0 3.60e-01 89.8% 70.6%
4932637 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.54 30.0 3.56e-01 87.4% 76.7%
5029238 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.52 32.0 3.58e-01 90.6% 77.0%
D2 high residues 72-191
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01131.26 best Topoisom_bac 82.7 3.80e-23 100.0% 29.1%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i7dA04 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.87 83.0 8.12e-01 100.0% 93.7%
4cgyA04 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.84 77.0 7.60e-01 100.0% 92.0%
6k8nA02 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.83 78.0 7.84e-01 100.0% 98.3%
1cy9A01 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.83 71.0 7.20e-01 100.0% 91.5%
1gkuB08 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.79 72.0 7.24e-01 100.0% 95.8%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590582 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.99 97.0 9.39e-01 100.0% 93.1%
4466579 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.90 86.0 8.37e-01 100.0% 93.1%
4602152 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.89 86.0 8.33e-01 100.0% 94.6%
3590144 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.88 84.0 8.15e-01 100.0% 93.1%
4319228 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.87 84.0 8.11e-01 100.0% 92.3%
4987355 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.86 80.0 7.86e-01 100.0% 92.8%
4943299 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.86 80.0 7.89e-01 100.0% 93.6%
4981102 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 77.0 7.61e-01 100.0% 91.2%
4960284 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.84 78.0 7.67e-01 100.0% 92.8%
3305633 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.84 77.0 7.64e-01 100.0% 92.8%
4976526 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 79.0 7.72e-01 100.0% 96.9%
5078217 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.84 56.0 6.29e-01 78.3% 86.3%
5021952 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.83 79.0 7.55e-01 100.0% 89.6%
5000123 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.83 79.0 7.55e-01 100.0% 93.3%
3876302 101.1.2.206 ↗ alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.83 35.0 3.74e-01 78.3% 46.7%
3176697 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.83 79.0 7.34e-01 100.0% 91.7%
4971255 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 78.0 7.75e-01 100.0% 96.0%
3756243 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.83 75.0 7.52e-01 100.0% 95.0%
5051951 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.82 78.0 7.59e-01 100.0% 92.3%
4933036 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.82 73.0 7.25e-01 100.0% 90.4%
3612398 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.81 70.0 7.06e-01 100.0% 90.8%
3594756 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 76.0 7.38e-01 100.0% 91.5%
4006756 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.80 73.0 5.25e-01 100.0% 37.7%
5001225 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 74.0 7.11e-01 100.0% 91.1%
4073954 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.78 74.0 7.06e-01 100.0% 90.4%
5008811 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.78 73.0 7.13e-01 100.0% 91.5%
3593806 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 72.0 6.85e-01 100.0% 90.7%
4324718 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.77 72.0 6.89e-01 100.0% 93.3%
D3 high residues 409-494
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13342.13 best Toprim_Crpt 45.4 8.80e-12 69.8% 93.3%
PF13101.13 DUF3945 28.5 1.30e-06 58.1% 87.0%
PF01396.25 Zn_ribbon_Top1 43.3 3.50e-11 38.4% 87.2%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 30.0 3.31e-01 81.4% 58.0%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.58 46.0 4.28e-01 86.0% 88.9%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 3.26e-01 100.0% 39.6%
4dloB01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.56 38.0 4.15e-01 95.3% 90.9%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 47.0 4.14e-01 98.8% 67.9%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 4.06e-01 95.3% 95.3%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 47.0 3.25e-01 100.0% 28.9%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 46.0 3.20e-01 100.0% 35.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.52 36.0 3.56e-01 95.3% 67.8%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.52 45.0 4.08e-01 100.0% 90.9%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.00e-01 100.0% 41.6%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.51 45.0 3.62e-01 100.0% 54.6%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.27e-01 83.7% 98.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590585 375.1.1.72 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Toprim_Crpt 0.87 80.0 7.87e-01 97.7% 94.4%
4324490 375.1.1.72 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Toprim_Crpt 0.84 76.0 7.48e-01 96.5% 96.7%
3223830 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 36.0 4.44e-01 81.4% 86.0%
4027080 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 38.0 3.24e-01 81.4% 34.1%
5018234 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.60 41.0 2.91e-01 72.1% 50.0%
3907285 5.1.4.257 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 0.59 51.0 3.34e-01 100.0% 26.8%
5040052 5.1.4.665 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.58 50.0 3.33e-01 100.0% 34.0%
4015863 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 50.0 3.39e-01 100.0% 35.2%
3936589 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.58 51.0 3.39e-01 100.0% 32.4%
3775135 5.1.4.257 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 0.57 49.0 3.16e-01 100.0% 28.1%
3691812 220.1.1.32 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.57 45.0 3.57e-01 87.2% 51.1%
3935844 5.1.3.204 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 0.56 48.0 3.34e-01 100.0% 42.5%
3371196 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 48.0 3.34e-01 100.0% 40.0%
3791563 5.1.2.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF7911 0.55 47.0 3.34e-01 100.0% 52.7%
3168874 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 47.0 3.21e-01 100.0% 50.1%
3733696 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.54 46.0 3.08e-01 100.0% 29.1%
3236818 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 3.17e-01 100.0% 43.1%
3727487 223.1.1.106 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7891 0.53 41.0 4.09e-01 82.6% 86.7%
4024671 4041.1.1.0 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.53 32.0 2.54e-01 97.7% 27.2%
360442 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.52 45.0 3.36e-01 100.0% 53.5%
5081581 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 3.36e-01 100.0% 82.2%
3943067 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.50 40.0 3.46e-01 94.2% 53.6%
3941378 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.50 38.0 3.77e-01 84.9% 83.2%
D4 medium residues 266-357
PDB
Domain cluster: rep: IMGVR_UViG_3300008993_000499-3300008993-Ga0104258_10042641__D212-235_509-600
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01131.26 best Topoisom_bac 71.7 8.80e-20 100.0% 18.0%
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.94 91.0 6.96e-01 100.0% 51.7%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.92 73.0 5.87e-01 100.0% 46.6%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.83 55.0 4.00e-01 83.7% 27.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 50.0 4.42e-01 84.8% 44.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 53.0 4.72e-01 89.1% 49.2%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 50.0 5.08e-01 84.8% 63.3%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 51.0 5.11e-01 84.8% 62.1%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 45.0 4.51e-01 78.3% 55.9%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 50.0 4.27e-01 85.9% 42.8%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 6.06e-01 92.4% 86.1%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 42.0 4.27e-01 77.2% 53.9%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 51.0 5.35e-01 85.9% 74.1%
2fbkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 4.35e-01 92.4% 42.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 45.0 4.98e-01 80.4% 75.0%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.75 72.0 5.83e-01 100.0% 59.0%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 4.25e-01 85.9% 46.9%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 41.0 4.74e-01 79.3% 75.0%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 41.0 4.28e-01 70.7% 58.6%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 44.0 4.91e-01 80.4% 76.7%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.09e-01 92.4% 41.7%
3pfiA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 5.02e-01 82.6% 79.5%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.50e-01 100.0% 80.7%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 3.88e-01 85.9% 39.1%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.35e-01 92.4% 48.9%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 4.57e-01 80.4% 64.0%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 4.16e-01 89.1% 46.3%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 44.0 4.92e-01 81.5% 80.0%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.72 39.0 4.61e-01 82.6% 78.7%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.22e-01 80.4% 78.6%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 43.0 4.76e-01 79.3% 75.3%
3kfwX01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 4.99e-01 82.6% 80.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.06e-01 82.6% 75.9%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 36.0 4.20e-01 70.7% 69.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 40.0 4.18e-01 79.3% 62.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.19e-01 92.4% 72.4%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.63e-01 84.8% 66.3%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 37.0 3.90e-01 73.9% 58.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 40.0 4.36e-01 79.3% 69.7%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 37.0 3.85e-01 77.2% 57.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 42.0 4.49e-01 87.0% 74.4%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 39.0 3.94e-01 75.0% 57.6%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 4.42e-01 88.0% 74.0%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 36.0 4.07e-01 70.7% 71.0%
1xdsB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 39.0 3.99e-01 79.3% 60.9%
2plyB01 1.10.10.2770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 35.0 3.09e-01 70.7% 35.5%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.45e-01 84.8% 67.3%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.86e-01 96.7% 74.8%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.39e-01 87.0% 72.9%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.13e-01 92.4% 51.8%
3dpuA03 1.10.10.2200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 37.0 4.04e-01 73.9% 70.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.46e-01 91.3% 73.3%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.55e-01 85.9% 80.0%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 4.17e-01 96.7% 63.6%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 41.0 4.25e-01 87.0% 70.5%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.55e-01 91.3% 80.5%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 39.0 4.02e-01 85.9% 66.3%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 4.26e-01 88.0% 73.3%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.27e-01 94.6% 57.4%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 4.17e-01 87.0% 70.5%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.59e-01 97.8% 84.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.44e-01 88.0% 65.1%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 33.0 3.77e-01 73.9% 73.4%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.45e-01 97.8% 77.5%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.27e-01 87.0% 79.5%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.40e-01 87.0% 79.8%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.36e-01 94.6% 77.5%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 4.21e-01 83.7% 79.3%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 50.0 4.56e-01 96.7% 84.2%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587937 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.99 97.0 7.03e-01 100.0% 43.8%
3947936 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.97 90.0 7.82e-01 98.9% 68.5%
4887378 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.94 73.0 5.73e-01 97.8% 43.0%
3587546 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.94 72.0 5.80e-01 100.0% 45.6%
5022395 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.94 75.0 5.95e-01 100.0% 46.1%
4442595 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.93 74.0 4.87e-01 100.0% 23.4%
4006756 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.92 74.0 4.90e-01 100.0% 24.9%
4192840 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.92 87.0 6.58e-01 100.0% 47.2%
4283969 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.90 83.0 6.32e-01 100.0% 46.2%
4956004 2004.1.1.1195 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Topoisom_bac 0.89 72.0 4.54e-01 100.0% 19.3%
4996074 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 53.0 5.66e-01 87.0% 72.5%
3602631 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.84 51.0 5.51e-01 84.8% 71.2%
5006346 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.84 50.0 5.03e-01 84.8% 58.9%
5032090 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.84 50.0 5.66e-01 83.7% 78.6%
5003459 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.83 71.0 5.46e-01 100.0% 44.3%
5044919 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 52.0 5.77e-01 84.8% 79.5%
3282607 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 54.0 4.79e-01 85.9% 48.8%
4931635 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.83 53.0 5.56e-01 87.0% 71.4%
4954458 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 48.0 5.27e-01 79.3% 72.0%
2613 101.1.2.105 ↗ alpha arrays › HTH › HTH › winged helix domain › MotA_activ 0.81 51.0 5.11e-01 84.8% 62.1%
4947296 101.1.2.905 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4443 0.81 51.0 5.66e-01 85.9% 78.7%
4185879 101.1.2.210 ↗ alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.81 51.0 5.33e-01 87.0% 69.4%
5073255 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 52.0 5.09e-01 84.8% 61.0%
4948727 101.1.2.934 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.80 49.0 5.58e-01 85.9% 81.4%
5032748 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.80 47.0 5.20e-01 81.5% 72.0%
4352407 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 47.0 5.36e-01 92.4% 78.6%
5055888 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.79 50.0 5.52e-01 89.1% 78.7%
5031879 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 49.0 4.85e-01 85.9% 60.0%
3291655 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.79 51.0 5.05e-01 85.9% 63.2%
5048178 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 43.0 4.64e-01 71.7% 62.5%
4928632 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.79 49.0 5.40e-01 85.9% 77.3%
5052967 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 49.0 3.84e-01 84.8% 31.4%
3654747 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.79 74.0 6.33e-01 100.0% 66.7%
5060150 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.79 49.0 5.11e-01 89.1% 68.2%
4957190 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 46.0 4.94e-01 80.4% 67.5%
4928588 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 49.0 4.43e-01 84.8% 48.3%
3593805 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 74.0 4.70e-01 100.0% 26.2%
5020992 101.1.2.728 ↗ alpha arrays › HTH › HTH › winged helix domain › PF31122 0.78 50.0 4.74e-01 89.1% 55.5%
5042212 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 54.0 4.65e-01 87.0% 47.9%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 53.0 5.51e-01 82.6% 76.5%
5073893 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 48.0 5.01e-01 85.9% 68.2%
4264627 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.77 73.0 5.66e-01 100.0% 51.1%
5081885 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 51.0 5.44e-01 83.7% 78.8%
4934145 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 48.0 4.66e-01 85.9% 58.0%
4109720 101.1.2.404 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF505 0.76 56.0 5.71e-01 96.7% 78.9%
5002434 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 47.0 5.17e-01 81.5% 77.3%
4988773 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.51e-01 100.0% 56.7%
5000448 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.75 71.0 5.27e-01 100.0% 44.3%
4971257 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 72.0 5.50e-01 100.0% 50.3%
4934737 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.75 50.0 5.31e-01 92.4% 77.5%
5035853 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.75 48.0 4.70e-01 89.1% 60.0%
2137768 101.1.2.49 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.75 58.0 4.64e-01 100.0% 43.4%
5002415 101.1.2.728 ↗ alpha arrays › HTH › HTH › winged helix domain › PF31122 0.74 50.0 4.73e-01 92.4% 58.2%
4990155 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.74 70.0 5.39e-01 100.0% 49.7%
4938492 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 49.0 5.29e-01 91.3% 78.8%
4367263 101.1.2.71 ↗ alpha arrays › HTH › HTH › winged helix domain › RuvB_C 0.73 45.0 4.97e-01 88.0% 76.0%
4992317 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 4.49e-01 88.0% 52.0%
4977918 101.1.2.210 ↗ alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.73 49.0 4.84e-01 91.3% 66.3%
5039517 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 44.0 4.94e-01 77.2% 80.0%
5040315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 50.0 5.07e-01 87.0% 73.3%
4955345 101.1.2.181 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.71 46.0 4.90e-01 88.0% 75.0%
5053119 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 48.0 4.45e-01 85.9% 54.2%
334009 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.70 48.0 4.18e-01 92.4% 47.1%
3741065 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 47.0 4.73e-01 84.8% 67.4%
4997796 2006.1.6.45 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.70 48.0 3.32e-01 82.6% 22.5%
5013696 101.1.2.950 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29171 0.69 43.0 4.58e-01 83.7% 71.2%
2140757 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.69 42.0 4.41e-01 82.6% 67.1%
4030786 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.69 53.0 5.17e-01 80.4% 76.0%
4940863 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 40.0 4.27e-01 79.3% 65.1%
4968451 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 4.83e-01 84.8% 63.8%
3550852 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.68 47.0 4.58e-01 84.8% 65.0%
4627782 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 44.0 4.55e-01 84.8% 70.6%
5072661 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 44.0 4.70e-01 88.0% 76.2%
5043021 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.62e-01 91.3% 72.2%
4137092 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.65 46.0 4.87e-01 95.7% 83.7%
3977861 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.64 46.0 4.77e-01 94.6% 80.0%
2566 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.64 46.0 4.47e-01 84.8% 68.0%
4456623 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.64 51.0 4.06e-01 91.3% 42.1%
3853979 101.1.2.573 ↗ alpha arrays › HTH › HTH › winged helix domain › NPHP3_hel 0.63 46.0 4.09e-01 91.3% 53.8%
3588658 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 5.34e-01 91.3% 89.5%
4008585 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 45.0 4.59e-01 94.6% 76.7%
3946422 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.55e-01 94.6% 78.8%
5050370 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 51.0 3.80e-01 85.9% 40.0%
5048676 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.62 50.0 4.91e-01 85.9% 85.0%
2708 101.1.2.49 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.62 57.0 4.57e-01 98.9% 82.8%
4999461 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 4.40e-01 91.3% 82.0%
4402403 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.61 32.0 3.64e-01 70.7% 65.7%
3968396 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.61 44.0 4.47e-01 96.7% 76.7%
4978790 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.55e-01 100.0% 72.2%
5064168 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 5.05e-01 83.7% 95.3%
3799929 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 3.54e-01 87.0% 39.4%
5011994 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.61 51.0 4.46e-01 88.0% 64.6%
3279636 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.60 42.0 4.26e-01 92.4% 73.3%
4217425 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.60 32.0 3.25e-01 70.7% 51.1%
4251290 101.1.2.573 ↗ alpha arrays › HTH › HTH › winged helix domain › NPHP3_hel 0.59 46.0 4.47e-01 88.0% 75.0%
4049731 101.19.1.1 ↗ alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.53 35.0 3.84e-01 90.2% 82.7%
3371034 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.27e-01 83.7% 46.5%
D5 medium residues 358-408
PDB
Domain cluster: representative