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KX130668.1__ANM45852.1__NBD2_10__00010

Bact-Vir

KX130668.1__ANM45852.1__NBD2_10__00010

Identity

Accession:
KX130668 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Vilniusvirus› Escherichia_phage_vB_EcoS_NBD2

TaxID: 1852563

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
Domain cluster: rep: ON843697.1__UTQ80602.1__Motto_68__00068__D2-83
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 46.0 5.74e-01 86.9% 96.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 44.0 5.48e-01 86.9% 92.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 45.0 5.22e-01 86.9% 81.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 44.0 5.20e-01 86.9% 83.9%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 47.0 5.62e-01 89.3% 91.2%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 42.0 5.29e-01 86.9% 93.8%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 44.0 4.74e-01 90.5% 67.6%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.76 46.0 5.70e-01 86.9% 100.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 44.0 5.35e-01 89.3% 94.1%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 48.0 5.70e-01 90.5% 98.2%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 47.0 4.69e-01 86.9% 64.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 52.0 5.36e-01 94.0% 78.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 42.0 4.72e-01 90.5% 75.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 48.0 5.43e-01 89.3% 90.6%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 44.0 4.94e-01 89.3% 81.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 49.0 4.35e-01 92.9% 50.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 48.0 5.49e-01 89.3% 98.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 40.0 4.87e-01 88.1% 90.4%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 50.0 5.57e-01 89.3% 96.9%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 49.0 5.44e-01 88.1% 92.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 42.0 4.52e-01 92.9% 71.2%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.68 48.0 4.54e-01 86.9% 62.9%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 36.0 4.45e-01 82.1% 91.3%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 5.23e-01 94.0% 89.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 41.0 4.82e-01 91.7% 94.4%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 5.41e-01 92.9% 97.1%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.66 45.0 4.34e-01 88.1% 62.1%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 5.32e-01 84.5% 100.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.66 40.0 3.81e-01 89.3% 51.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.66 46.0 4.79e-01 96.4% 79.2%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 45.0 4.91e-01 86.9% 88.6%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 40.0 4.50e-01 89.3% 83.1%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 39.0 4.42e-01 89.3% 85.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.63 44.0 4.10e-01 92.9% 56.9%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.61 44.0 3.30e-01 92.9% 30.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.22e-01 96.4% 71.1%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 35.0 4.14e-01 86.9% 90.4%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 36.0 4.15e-01 90.5% 83.3%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 5.08e-01 100.0% 97.4%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.06e-01 89.3% 70.2%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.84e-01 98.8% 87.1%
1u6mA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 43.0 3.43e-01 82.1% 61.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.12e-01 97.6% 77.8%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 48.0 4.72e-01 100.0% 88.9%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.54 45.0 3.65e-01 96.4% 84.6%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.82e-01 92.9% 93.2%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 35.0 3.10e-01 75.0% 81.9%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 51.0 6.17e-01 89.3% 92.7%
5000308 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 46.0 5.77e-01 89.3% 100.0%
3660922 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.78 44.0 4.96e-01 86.9% 72.3%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.78 47.0 5.26e-01 89.3% 78.5%
3302829 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.78 46.0 5.16e-01 88.1% 76.9%
3821919 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 43.0 4.93e-01 88.1% 75.0%
4030603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 49.0 5.46e-01 88.1% 80.9%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.77 44.0 4.81e-01 90.5% 68.6%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 46.0 5.19e-01 89.3% 78.5%
3169607 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.77 46.0 4.83e-01 91.7% 66.7%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.76 45.0 5.43e-01 90.5% 90.9%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 50.0 5.82e-01 86.9% 95.0%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 44.0 3.45e-01 84.5% 28.0%
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.76 45.0 5.47e-01 86.9% 92.6%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.76 43.0 5.25e-01 86.9% 88.9%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.75 49.0 4.42e-01 95.2% 48.7%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 48.0 5.85e-01 85.7% 100.0%
3675511 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.74 49.0 5.08e-01 96.4% 71.2%
4357819 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.74 44.0 4.80e-01 94.0% 71.4%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 47.0 5.43e-01 89.3% 90.0%
4629022 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.74 43.0 4.70e-01 89.3% 70.0%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 45.0 5.14e-01 92.9% 85.0%
3296865 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.73 48.0 4.46e-01 97.6% 53.3%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.73 47.0 5.18e-01 89.3% 83.1%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 43.0 3.48e-01 79.8% 30.6%
4098445 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.73 43.0 4.92e-01 91.7% 81.7%
3358753 4.1.1.381 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.73 48.0 3.82e-01 97.6% 34.5%
4932493 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 47.0 5.24e-01 96.4% 86.2%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 46.0 5.04e-01 85.7% 78.6%
4484974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.44e-01 100.0% 80.0%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 47.0 5.00e-01 88.1% 76.0%
4024240 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 47.0 4.87e-01 89.3% 71.2%
3930014 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 43.0 3.50e-01 82.1% 31.9%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.71 46.0 4.99e-01 86.9% 80.0%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 46.0 5.03e-01 89.3% 81.4%
5001589 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.70 50.0 4.74e-01 96.4% 63.0%
1793524 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.70 50.0 4.73e-01 88.1% 63.6%
4446467 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.69 48.0 5.31e-01 89.3% 92.3%
3627859 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.69 45.0 4.79e-01 88.1% 76.0%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 52.0 5.23e-01 100.0% 81.2%
3933788 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 4.92e-01 90.5% 88.3%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.68 49.0 4.89e-01 91.7% 74.1%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 43.0 5.13e-01 81.0% 100.0%
3257276 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 53.0 4.60e-01 95.2% 56.0%
3575066 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 46.0 5.26e-01 85.7% 98.3%
3276044 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.67 49.0 3.15e-01 89.3% 16.9%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 4.94e-01 97.6% 74.4%
4317035 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 43.0 4.33e-01 96.4% 64.7%
1545880 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.66 49.0 5.07e-01 92.9% 82.5%
4596087 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 47.0 4.91e-01 89.3% 82.7%
3933539 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 43.0 4.86e-01 94.0% 87.7%
5064571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 43.0 4.25e-01 86.9% 63.3%
5046193 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.65 41.0 4.08e-01 94.0% 60.0%
4358722 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.64 45.0 4.15e-01 85.7% 58.1%
4491893 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.64 48.0 4.51e-01 90.5% 65.0%
3929373 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.64 40.0 4.56e-01 86.9% 88.3%
4947175 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.64 39.0 3.85e-01 90.5% 56.7%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.83e-01 91.7% 85.3%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.63 43.0 4.74e-01 95.2% 90.8%
3373583 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 44.0 4.75e-01 90.5% 88.6%
185736 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.61 44.0 3.23e-01 92.9% 27.8%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.28e-01 97.6% 60.9%
3808601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 5.19e-01 92.9% 91.8%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.85e-01 88.1% 91.4%
4347828 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.73e-01 85.7% 90.0%
3514522 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 46.0 4.86e-01 91.7% 92.0%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 49.0 4.15e-01 91.7% 54.3%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 48.0 4.93e-01 90.5% 92.5%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.41e-01 88.1% 77.6%
4101587 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 44.0 4.09e-01 86.9% 63.8%
3592013 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 52.0 4.66e-01 98.8% 80.0%
3627869 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.58 52.0 4.25e-01 100.0% 72.3%
3332609 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 44.0 3.88e-01 83.3% 55.2%
2831853 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.58 52.0 4.17e-01 98.8% 58.5%
3592525 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.02e-01 84.5% 62.7%
4193599 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.94e-01 96.4% 63.8%
None — 0.56 49.0 3.17e-01 98.8% 22.8%
3518287 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.55 47.0 4.25e-01 92.9% 95.7%
3275383 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.54 45.0 3.44e-01 96.4% 84.5%
3251414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 3.95e-01 96.4% 67.3%
4481025 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.53 46.0 3.65e-01 100.0% 81.5%
4184660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 47.0 4.03e-01 97.6% 66.2%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.52 46.0 4.05e-01 97.6% 80.0%
3198731 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.52 46.0 3.97e-01 98.8% 81.5%