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KX160219.1__ANT44128.1__C41431_48__00047
Bact-VirKX160219.1__ANT44128.1__C41431_48__00047
Identity
- Accession:
- KX160219 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
rep: MK448889.1__QBX25524.1__Javan262_0009__00025__D2-98
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.84 | 66.0 | 7.16e-01 | 100.0% | 98.7% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.77 | 46.0 | 4.63e-01 | 75.8% | 59.4% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 47.0 | 4.98e-01 | 78.9% | 77.9% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 42.0 | 4.85e-01 | 100.0% | 92.3% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.66 | 46.0 | 4.25e-01 | 72.6% | 91.9% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.66 | 47.0 | 4.65e-01 | 100.0% | 69.6% |
| 4f80A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.21e-01 | 75.8% | 66.7% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 58.0 | 5.41e-01 | 100.0% | 86.6% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.63 | 55.0 | 5.05e-01 | 100.0% | 93.8% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 56.0 | 4.33e-01 | 100.0% | 58.1% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 57.0 | 4.48e-01 | 100.0% | 59.4% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.62 | 48.0 | 4.72e-01 | 100.0% | 76.9% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.62 | 37.0 | 3.76e-01 | 78.9% | 58.3% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.61 | 48.0 | 4.59e-01 | 100.0% | 73.4% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 42.0 | 4.00e-01 | 96.8% | 60.5% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.60 | 39.0 | 4.08e-01 | 89.5% | 71.9% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 40.0 | 3.87e-01 | 88.4% | 61.5% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.58 | 51.0 | 4.70e-01 | 100.0% | 95.3% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 42.0 | 3.97e-01 | 100.0% | 62.1% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 39.0 | 3.38e-01 | 100.0% | 44.3% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.94e-01 | 76.8% | 66.3% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 3.74e-01 | 96.8% | 56.6% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.57 | 50.0 | 4.85e-01 | 100.0% | 87.2% |
| 3if8B03 | 6.20.270.10 | Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › | 0.57 | 29.0 | 3.60e-01 | 82.1% | 78.3% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.87e-01 | 85.3% | 72.4% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 3.89e-01 | 96.8% | 82.6% |
| 4eqmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 4.15e-01 | 83.2% | 79.8% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 42.0 | 4.27e-01 | 84.2% | 80.2% |
| 7zvsB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 39.0 | 3.92e-01 | 85.3% | 71.7% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.54 | 44.0 | 4.19e-01 | 88.4% | 84.7% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.41e-01 | 88.4% | 65.9% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.79e-01 | 72.6% | 94.4% |
| 6pxyA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 37.0 | 3.51e-01 | 74.7% | 77.8% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.77e-01 | 97.9% | 67.2% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 37.0 | 3.76e-01 | 83.2% | 74.2% |
| 4jgpA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 3.58e-01 | 72.6% | 93.9% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 3.05e-01 | 73.7% | 76.3% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 42.0 | 3.90e-01 | 94.7% | 68.8% |
| 5oj2B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.50e-01 | 76.8% | 69.8% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 25.0 | 2.73e-01 | 97.9% | 53.8% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 35.0 | 3.23e-01 | 73.7% | 75.2% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 71.0 | 7.52e-01 | 98.9% | 100.0% |
| 4141852 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.82 | 67.0 | 7.03e-01 | 100.0% | 96.5% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.77 | 53.0 | 5.35e-01 | 100.0% | 71.6% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 57.0 | 6.15e-01 | 100.0% | 96.2% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 52.0 | 5.15e-01 | 94.7% | 73.0% |
| 4970307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 52.0 | 4.87e-01 | 76.8% | 65.2% |
| 3685973 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 51.0 | 4.64e-01 | 82.1% | 58.4% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 50.0 | 4.99e-01 | 94.7% | 73.0% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.68 | 51.0 | 4.65e-01 | 78.9% | 60.0% |
| 3251680 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.67 | 51.0 | 4.66e-01 | 80.0% | 60.8% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.65 | 48.0 | 4.93e-01 | 100.0% | 82.2% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 56.0 | 5.49e-01 | 94.7% | 89.5% |
| 3966543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 54.0 | 5.04e-01 | 94.7% | 85.8% |
| 3967437 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.63 | 54.0 | 5.14e-01 | 93.7% | 92.7% |
| 1725861 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.63 | 57.0 | 4.48e-01 | 100.0% | 59.4% |
| 1117748 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.62 | 57.0 | 5.51e-01 | 100.0% | 97.1% |
| 3268571 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.62 | 52.0 | 4.13e-01 | 91.6% | 52.8% |
| 4438946 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 41.0 | 4.36e-01 | 97.9% | 76.5% |
| 4373808 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.62 | 49.0 | 4.67e-01 | 100.0% | 74.5% |
| 4083333 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 40.0 | 4.08e-01 | 89.5% | 67.4% |
| 2774000 | 881.4.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › MucB_RseB_C | 0.61 | 40.0 | 3.97e-01 | 84.2% | 62.1% |
| 3841321 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.61 | 44.0 | 3.10e-01 | 85.3% | 24.8% |
| 4991994 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 30.0 | 3.90e-01 | 100.0% | 83.6% |
| 3235155 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 44.0 | 3.00e-01 | 85.3% | 22.2% |
| 2989727 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.60 | 55.0 | 5.32e-01 | 100.0% | 95.3% |
| 3217006 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.60 | 43.0 | 2.93e-01 | 85.3% | 20.9% |
| 2898325 | 271.1.1.2 ↗ | beta barrels › GFP-like › GFP-like › GFP-like | 0.59 | 47.0 | 3.31e-01 | 85.3% | 94.5% |
| 4990492 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 31.0 | 4.04e-01 | 96.8% | 98.0% |
| 3576348 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 43.0 | 3.45e-01 | 84.2% | 41.1% |
| 4974879 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 44.0 | 3.69e-01 | 83.2% | 66.1% |
| 4946993 | 4.1.1.479 ↗ | beta barrels › SH3 › SH3 › SH3 › eIF-5a | 0.56 | 33.0 | 3.83e-01 | 98.9% | 80.0% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.56 | 34.0 | 3.90e-01 | 96.8% | 82.9% |
| 3333639 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.56 | 41.0 | 3.60e-01 | 77.9% | 56.6% |
| 4109413 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 43.0 | 3.77e-01 | 100.0% | 54.7% |
| None | — | 0.55 | 42.0 | 3.15e-01 | 83.2% | 89.2% | |
| 3483489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 34.0 | 3.78e-01 | 90.5% | 80.0% |
| 3723056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 47.0 | 3.96e-01 | 100.0% | 55.9% |
| 3741202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.56e-01 | 84.2% | 67.1% |
| 3998997 | 389.1.2.9 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › C6 | 0.53 | 34.0 | 3.56e-01 | 100.0% | 70.0% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.53 | 34.0 | 3.77e-01 | 95.8% | 82.7% |
| 3643549 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.53 | 33.0 | 3.58e-01 | 90.5% | 75.0% |
| 3734270 | 7579.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like | 0.53 | 41.0 | 2.72e-01 | 84.2% | 68.7% |
| 3787819 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 40.0 | 3.92e-01 | 84.2% | 97.1% |
| 3544845 | 5.1.3.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 | 0.51 | 39.0 | 2.71e-01 | 84.2% | 45.1% |
| 3313688 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.50 | 31.0 | 3.14e-01 | 95.8% | 58.0% |
D2
high
residues 101-191
Domain cluster:
rep: NC_047925.1__YP_009798321.1__HOS79_gp108__00101__D161-239
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.77 | 64.0 | 6.62e-01 | 100.0% | 96.5% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.76 | 64.0 | 6.39e-01 | 100.0% | 89.1% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.74 | 64.0 | 5.35e-01 | 95.6% | 56.7% |
| 4g08A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.72 | 53.0 | 5.84e-01 | 92.3% | 100.0% |
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.72 | 60.0 | 5.98e-01 | 100.0% | 90.2% |
| 4jtmA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.71 | 57.0 | 6.03e-01 | 96.7% | 97.5% |
| 3adyA00 | 3.55.50.60 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein | 0.71 | 59.0 | 5.70e-01 | 100.0% | 80.4% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.70 | 62.0 | 6.12e-01 | 100.0% | 94.8% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.66 | 58.0 | 5.70e-01 | 98.9% | 96.0% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.66 | 26.0 | 3.59e-01 | 92.3% | 71.7% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 41.0 | 4.32e-01 | 83.5% | 82.9% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 40.0 | 4.27e-01 | 82.4% | 85.7% |
| 6blkC00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 46.0 | 3.89e-01 | 90.1% | 96.8% |
| 5idmA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 45.0 | 3.63e-01 | 87.9% | 92.1% |
| 3og5A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 38.0 | 3.90e-01 | 83.5% | 78.8% |
| 3es1A01 | 2.20.70.150 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.53 | 23.0 | 3.37e-01 | 76.9% | 94.6% |
| 3iibA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 37.0 | 2.72e-01 | 79.1% | 53.8% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 38.0 | 4.09e-01 | 100.0% | 97.3% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 37.0 | 3.88e-01 | 83.5% | 84.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.83 | 64.0 | 6.96e-01 | 96.7% | 97.3% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.83 | 63.0 | 6.89e-01 | 97.8% | 97.3% |
| 4031358 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.82 | 73.0 | 7.26e-01 | 100.0% | 92.6% |
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 63.0 | 6.88e-01 | 98.9% | 100.0% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.78 | 60.0 | 6.50e-01 | 100.0% | 98.7% |
| 4889789 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.77 | 62.0 | 6.38e-01 | 100.0% | 91.9% |
| 3981376 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 58.0 | 6.32e-01 | 100.0% | 98.7% |
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.76 | 64.0 | 6.46e-01 | 100.0% | 93.3% |
| 3967438 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.76 | 64.0 | 6.45e-01 | 100.0% | 93.3% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.75 | 64.0 | 6.43e-01 | 100.0% | 93.3% |
| 4954564 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.75 | 68.0 | 6.50e-01 | 100.0% | 93.3% |
| 3967020 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.72 | 56.0 | 5.78e-01 | 97.8% | 88.2% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.71 | 57.0 | 6.00e-01 | 96.7% | 97.5% |
| 3941987 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.69 | 56.0 | 5.81e-01 | 100.0% | 96.5% |
| 3519114 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 40.0 | 3.74e-01 | 83.5% | 50.0% |
| 1124160 | 3070.1.1.9 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Caud_bapl16_2nd | 0.66 | 59.0 | 5.64e-01 | 100.0% | 91.4% |
| 4943533 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.64 | 51.0 | 4.17e-01 | 84.6% | 69.4% |
| 3838607 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.58 | 46.0 | 3.98e-01 | 85.7% | 73.1% |
| 3976466 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.58 | 47.0 | 3.97e-01 | 86.8% | 98.7% |
| 4946456 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.57 | 45.0 | 3.82e-01 | 84.6% | 72.7% |
| 4198253 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 47.0 | 3.78e-01 | 90.1% | 96.0% |
| 5047357 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 47.0 | 3.90e-01 | 89.0% | 98.1% |
| 4673175 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.56 | 40.0 | 4.22e-01 | 82.4% | 83.7% |
| 2547935 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.56 | 40.0 | 4.09e-01 | 83.5% | 76.4% |
| 5045426 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 46.0 | 3.84e-01 | 91.2% | 92.5% |
| 3839154 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.55 | 39.0 | 4.00e-01 | 83.5% | 78.8% |
| 4980006 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.54 | 42.0 | 3.63e-01 | 84.6% | 69.0% |
| 4528693 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.53 | 37.0 | 3.93e-01 | 83.5% | 83.7% |
| 4085807 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.51 | 38.0 | 3.98e-01 | 82.4% | 84.7% |
| 5004772 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.87e-01 | 89.0% | 80.0% |
D3
high
residues 223-318
Domain cluster:
rep: MF580769.1__ATI19857.1__L5A1_015__00015__D229-316
D4
high
residues 747-855
Domain cluster:
rep: OR521085.1__WNO28334.1__SEA_PSONYX_24__00024__D30-132
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.84 | 78.0 | 7.77e-01 | 97.2% | 98.2% |
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.78 | 67.0 | 6.89e-01 | 100.0% | 96.2% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.78 | 68.0 | 6.86e-01 | 100.0% | 95.3% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.74 | 67.0 | 5.60e-01 | 100.0% | 97.8% |
| 1gcyA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 37.0 | 4.86e-01 | 93.6% | 100.0% |
| 2gr7A00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.68 | 33.0 | 3.45e-01 | 100.0% | 50.5% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 55.0 | 5.04e-01 | 89.0% | 76.2% |
| 4e2oA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 48.0 | 5.23e-01 | 96.3% | 93.2% |
| 3wy2A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 43.0 | 5.04e-01 | 97.2% | 98.6% |
| 1cgtA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 50.0 | 5.34e-01 | 97.2% | 92.6% |
| 2bzvA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.65 | 58.0 | 5.25e-01 | 97.2% | 97.9% |
| 1wzlA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 47.0 | 5.26e-01 | 97.2% | 100.0% |
| 5z0uA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 48.0 | 5.12e-01 | 95.4% | 93.3% |
| 3aj7A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 45.0 | 5.13e-01 | 96.3% | 100.0% |
| 7jjtA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 47.0 | 5.18e-01 | 96.3% | 95.5% |
| 4xb3A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 41.0 | 4.90e-01 | 95.4% | 100.0% |
| 1j0hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 44.0 | 4.94e-01 | 97.2% | 97.6% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 51.0 | 5.24e-01 | 99.1% | 93.4% |
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.60 | 43.0 | 4.52e-01 | 99.1% | 81.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 30.0 | 3.54e-01 | 96.3% | 68.4% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.59 | 38.0 | 4.05e-01 | 98.2% | 74.5% |
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.59 | 47.0 | 4.33e-01 | 89.9% | 65.8% |
| 1qhdA01 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 4.38e-01 | 97.2% | 98.2% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.58 | 38.0 | 4.28e-01 | 84.4% | 91.1% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.57 | 46.0 | 4.34e-01 | 86.2% | 82.7% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 35.0 | 4.14e-01 | 96.3% | 100.0% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 50.0 | 4.26e-01 | 97.2% | 93.8% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 50.0 | 4.49e-01 | 100.0% | 98.1% |
| 2q2eB05 | 2.60.40.2960 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 36.0 | 3.89e-01 | 86.2% | 78.0% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 36.0 | 3.86e-01 | 82.6% | 78.9% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 44.0 | 4.13e-01 | 88.1% | 70.4% |
| 1nkgA02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.55 | 33.0 | 3.65e-01 | 99.1% | 76.5% |
| 2dt4A00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.54 | 39.0 | 3.61e-01 | 76.1% | 82.5% |
| 5zl6A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 44.0 | 4.01e-01 | 92.7% | 86.8% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.47e-01 | 90.8% | 78.8% |
| 2p0oA02 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.52 | 36.0 | 3.55e-01 | 72.5% | 81.5% |
| 7r2xA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 46.0 | 3.53e-01 | 100.0% | 89.5% |
| 1pzdA01 | 2.60.40.1480 | Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain | 0.51 | 41.0 | 3.74e-01 | 89.9% | 91.0% |
| 1cb8A02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 46.0 | 3.56e-01 | 100.0% | 58.1% |
| 4y5tB00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 42.0 | 3.21e-01 | 92.7% | 58.2% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.50 | 41.0 | 3.85e-01 | 90.8% | 84.9% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 40.0 | 2.98e-01 | 86.2% | 51.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184600 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.84 | 78.0 | 7.77e-01 | 97.2% | 98.2% |
| 3588403 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.82 | 72.0 | 7.42e-01 | 100.0% | 99.0% |
| 961561 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.78 | 67.0 | 6.85e-01 | 100.0% | 97.1% |
| 1558582 | 5092.1.1.6 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 | 0.74 | 66.0 | 6.56e-01 | 97.2% | 98.3% |
| 1978 | 12.1.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › AMT4_dom_C | 0.69 | 38.0 | 4.85e-01 | 96.3% | 96.7% |
| 5038999 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.65 | 52.0 | 4.26e-01 | 89.9% | 47.0% |
| 5069410 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.65 | 50.0 | 4.19e-01 | 89.0% | 46.7% |
| 5034475 | 11.1.1.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_C25_C | 0.64 | 43.0 | 4.64e-01 | 100.0% | 83.3% |
| 4936904 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.61 | 48.0 | 5.05e-01 | 94.5% | 96.8% |
| 2589595 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 4.80e-01 | 100.0% | 98.9% |
| 2391407 | 12.3.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GalA_N | 0.58 | 50.0 | 4.30e-01 | 100.0% | 87.7% |
| 184770 | 3370.1.1.1 ↗ | beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 › Lactococcin_972 | 0.57 | 35.0 | 4.14e-01 | 96.3% | 100.0% |
| 4033975 | 11.1.3.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › DM13 | 0.57 | 36.0 | 3.79e-01 | 97.2% | 71.6% |
| 3403124 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.56 | 49.0 | 4.58e-01 | 97.2% | 97.1% |
| 4531587 | 5084.1.1.35 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 | 0.55 | 44.0 | 3.52e-01 | 87.2% | 89.3% |
| 3759783 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.58e-01 | 96.3% | 60.8% |
| 5023489 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 37.0 | 3.79e-01 | 74.3% | 90.9% |
| 5073452 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.53 | 45.0 | 4.10e-01 | 97.2% | 76.1% |
| 3245986 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.53 | 39.0 | 3.10e-01 | 78.9% | 42.6% |
| 4978194 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.52 | 44.0 | 4.02e-01 | 96.3% | 74.7% |
| 5058198 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.51 | 43.0 | 4.17e-01 | 96.3% | 80.8% |
| 5003413 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.51 | 37.0 | 3.51e-01 | 76.1% | 70.0% |
D5
medium
residues 326-369_387-409
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 3.18e-01 | 77.6% | 90.9% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 44.0 | 3.38e-01 | 80.6% | 76.1% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.58 | 40.0 | 3.04e-01 | 74.6% | 28.2% |
| 1l1oF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 3.28e-01 | 77.6% | 88.5% |
| 2wylC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 41.0 | 2.81e-01 | 85.1% | 75.8% |
| 5aykA05 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 40.0 | 3.51e-01 | 82.1% | 84.3% |
| 3o9zD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 38.0 | 2.89e-01 | 77.6% | 43.0% |
| 1ub1A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.51 | 37.0 | 3.09e-01 | 79.1% | 61.6% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.71e-01 | 94.0% | 38.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3514938 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.56 | 37.0 | 3.11e-01 | 77.6% | 38.3% |
| 3258685 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 38.0 | 3.22e-01 | 74.6% | 44.3% |
| 3592067 | 243.4.1.0 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like | 0.53 | 36.0 | 2.69e-01 | 71.6% | 44.4% |
| 4121071 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.52 | 39.0 | 3.01e-01 | 85.1% | 50.3% |
| 185388 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.51 | 38.0 | 2.78e-01 | 82.1% | 41.2% |
| 3175837 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 3.01e-01 | 82.1% | 79.3% |
| 3888097 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.51 | 38.0 | 2.62e-01 | 83.6% | 21.8% |
D6
medium
residues 410-501
Domain cluster:
rep: EF583821.1__ABS83757.1__0305phi8-36p199__00100__D311-389
D7
medium
residues 513-569
Domain cluster:
rep: IMGVR_UViG_3300014040_000006-3300014040-Ga0117811_100027527__D293-345
D8
medium
residues 588-740
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.64 | 51.0 | 3.80e-01 | 82.4% | 51.8% |
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.58 | 44.0 | 3.56e-01 | 79.1% | 53.7% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.76e-01 | 71.9% | 71.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3643596 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.65 | 52.0 | 5.46e-01 | 83.0% | 99.3% |
| 4338986 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.63 | 51.0 | 3.56e-01 | 83.7% | 67.3% |
| 2649512 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.63 | 55.0 | 5.13e-01 | 94.1% | 92.1% |
| 4375642 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.60 | 44.0 | 3.20e-01 | 75.2% | 43.7% |
| 3539857 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.59 | 54.0 | 4.86e-01 | 100.0% | 94.4% |
| 3441531 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.59 | 47.0 | 3.66e-01 | 81.7% | 91.9% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.58 | 34.0 | 3.22e-01 | 72.5% | 47.5% |
| 3695701 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.57 | 45.0 | 3.51e-01 | 81.7% | 48.9% |
| 3664957 | 5084.5.1.57 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 | 0.57 | 47.0 | 3.58e-01 | 86.3% | 50.4% |