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KX160220.1__ANT44140.1__Dub35A_007__00007

Bact-Vir

KX160220.1__ANT44140.1__Dub35A_007__00007

Identity

Accession:
KX160220 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactococcus_phage_Dub35A

TaxID: 1868862

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-67
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 69.0 7.04e-01 98.5% 95.4%
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 70.0 6.84e-01 100.0% 94.4%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 65.0 6.67e-01 100.0% 95.4%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.77 57.0 5.87e-01 91.0% 82.8%
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.77 55.0 4.13e-01 94.0% 31.7%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 58.0 5.42e-01 91.0% 66.7%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 61.0 5.65e-01 97.0% 70.2%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 58.0 5.96e-01 91.0% 88.9%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 61.0 5.55e-01 100.0% 66.0%
1x2lA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 67.0 6.12e-01 98.5% 81.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 55.0 5.63e-01 89.6% 85.7%
7ezyA01 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.73 53.0 4.45e-01 86.6% 45.2%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 58.0 5.45e-01 100.0% 72.9%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 57.0 5.64e-01 92.5% 89.0%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 44.0 3.51e-01 74.6% 79.7%
4c2uA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.61 44.0 4.18e-01 77.6% 92.6%
7b7tA01 1.20.1270.30 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 52.0 4.02e-01 100.0% 88.2%
4dwnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.59 49.0 4.49e-01 100.0% 87.6%
7tj4A01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 34.0 2.76e-01 77.6% 31.7%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.81e-01 73.1% 63.6%
6xssA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 34.0 3.36e-01 76.1% 55.1%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.57 41.0 3.34e-01 89.6% 37.2%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.57 41.0 3.97e-01 79.1% 68.0%
1wj7A01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.56 38.0 3.99e-01 100.0% 80.0%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.56 41.0 2.92e-01 77.6% 34.0%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 40.0 3.98e-01 76.1% 88.4%
1nvmA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.55 33.0 3.43e-01 86.6% 60.9%
5z9iA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 41.0 2.63e-01 83.6% 65.8%
1rcwB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 45.0 3.29e-01 100.0% 96.3%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.53 36.0 2.73e-01 71.6% 32.0%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.52 45.0 3.77e-01 98.5% 89.3%
2nyvA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 37.0 3.77e-01 76.1% 90.6%
2e71A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.50 34.0 3.28e-01 73.1% 60.2%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.50 39.0 3.64e-01 100.0% 66.3%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588628 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.90 70.0 7.49e-01 89.6% 94.8%
2627770 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.87 79.0 7.92e-01 100.0% 100.0%
3471028 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 76.0 6.60e-01 100.0% 69.0%
3518121 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.82 73.0 6.10e-01 100.0% 60.0%
363971 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.81 73.0 6.69e-01 100.0% 80.2%
3982126 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.75 64.0 5.91e-01 94.0% 75.3%
3976148 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 60.0 5.30e-01 97.0% 61.2%
4008447 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.73 62.0 5.91e-01 95.5% 81.2%
3284483 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 60.0 4.94e-01 95.5% 55.2%
4966173 101.1.4.97 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DrmE_C 0.70 61.0 5.05e-01 100.0% 56.8%
5013811 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 48.0 5.21e-01 73.1% 85.5%
3986190 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.63 51.0 4.67e-01 100.0% 67.7%
3927235 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.60 52.0 5.17e-01 100.0% 94.3%
3606888 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 41.0 3.78e-01 74.6% 91.6%
4029750 148.1.3.42 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.59 39.0 3.94e-01 95.5% 69.2%
3224412 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 36.0 4.01e-01 94.0% 82.0%
3691406 551.1.1.0 ↗ alpha arrays › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain 0.58 40.0 3.35e-01 100.0% 40.8%
5054121 5060.2.1.0 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain 0.57 41.0 3.55e-01 76.1% 63.6%
3164804 148.1.3.47 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid 0.57 39.0 3.84e-01 100.0% 67.1%
3895123 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.57 45.0 4.18e-01 92.5% 100.0%
1316897 532.2.1.1 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ 0.56 39.0 3.48e-01 71.6% 51.5%
5080963 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 40.0 3.76e-01 76.1% 67.1%
3285884 103.1.1.127 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RelA_AH_RIS 0.55 46.0 4.47e-01 100.0% 82.7%
3782551 109.4.1.442 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › THOC2_N 0.54 39.0 3.19e-01 76.1% 56.0%
3298392 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.51 40.0 3.72e-01 91.0% 67.1%
3384197 101.1.17.40 ↗ alpha arrays › HTH › HTH › FF domain › FF, FF_PRPF40A 0.51 40.0 3.39e-01 91.0% 51.8%
4182238 308.1.1.2 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS 0.51 42.0 3.97e-01 100.0% 80.0%