←Back to structures

KX160220.1__ANT44160.1__Dub35A_027__00027

Bact-Vir

KX160220.1__ANT44160.1__Dub35A_027__00027

Identity

Accession:
KX160220 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactococcus_phage_Dub35A

TaxID: 1868862

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-69
PDB
Domain cluster: rep: KU892558.1__ANA49652.1__PlgT1_39__00039__D5-71
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 62.0 5.66e-01 100.0% 59.3%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 65.0 6.52e-01 100.0% 84.1%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 66.0 5.99e-01 100.0% 67.4%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 62.0 5.78e-01 100.0% 68.2%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 61.0 6.27e-01 100.0% 87.9%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 61.0 6.05e-01 100.0% 79.5%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 62.0 6.01e-01 100.0% 76.6%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 62.0 6.04e-01 100.0% 77.6%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 62.0 6.34e-01 100.0% 89.4%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 58.0 5.82e-01 98.6% 78.9%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 59.0 5.98e-01 100.0% 82.6%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 58.0 5.98e-01 98.6% 84.8%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 60.0 6.22e-01 100.0% 92.1%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 59.0 5.89e-01 100.0% 82.9%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 58.0 6.11e-01 100.0% 95.0%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 59.0 5.99e-01 100.0% 86.6%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 65.0 6.41e-01 100.0% 91.8%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 56.0 5.69e-01 100.0% 85.3%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 48.0 4.19e-01 79.7% 70.8%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 51.0 4.25e-01 88.4% 75.8%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 47.0 4.64e-01 100.0% 78.4%
2mqaA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.57 47.0 3.96e-01 95.7% 84.8%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 45.0 3.47e-01 100.0% 52.1%
1szhA01 1.10.150.360 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 44.0 4.49e-01 91.3% 96.9%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 38.0 3.81e-01 78.3% 93.2%
1qagA01 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.53 40.0 3.65e-01 84.1% 75.0%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 40.0 3.33e-01 87.0% 85.0%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.51 35.0 3.53e-01 71.0% 98.5%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 35.0 3.34e-01 81.2% 59.1%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3957550 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 65.0 6.56e-01 100.0% 82.9%
3976255 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.81 64.0 6.23e-01 100.0% 77.3%
5003089 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 64.0 6.38e-01 100.0% 82.9%
3972208 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 64.0 6.20e-01 100.0% 77.3%
4952242 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.79 63.0 6.30e-01 100.0% 82.9%
4536849 10.12.1.146 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.79 62.0 3.77e-01 100.0% 14.1%
4507416 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 62.0 5.24e-01 100.0% 52.7%
4425759 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 62.0 5.23e-01 100.0% 52.7%
137778 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 61.0 6.27e-01 100.0% 86.6%
4010418 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 62.0 5.87e-01 100.0% 72.5%
2581392 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 62.0 6.18e-01 100.0% 83.1%
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 60.0 6.19e-01 100.0% 87.7%
5083215 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.77 61.0 6.25e-01 100.0% 89.2%
3976148 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 65.0 5.74e-01 100.0% 64.3%
5050903 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 59.0 5.80e-01 100.0% 76.0%
4537353 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 60.0 4.87e-01 100.0% 46.4%
2577290 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 61.0 5.79e-01 100.0% 72.8%
2766 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 60.0 6.22e-01 100.0% 92.1%
3970175 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 58.0 6.00e-01 100.0% 87.7%
4026045 101.1.4.85 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3, PF28877 0.75 56.0 5.97e-01 98.6% 91.7%
4455317 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 58.0 5.57e-01 100.0% 72.5%
4034513 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 58.0 6.14e-01 100.0% 96.7%
3944622 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 58.0 5.57e-01 100.0% 75.0%
3285630 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.71 63.0 6.12e-01 98.6% 90.7%
3943356 101.1.4.19 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 0.65 48.0 4.76e-01 100.0% 74.7%
5043988 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.59 42.0 3.59e-01 76.8% 93.3%
3253586 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.55 45.0 3.73e-01 98.6% 62.8%
4943203 101.1.1.19 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB 0.54 40.0 3.33e-01 79.7% 80.0%
3195084 109.4.1.1390 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31234 0.54 39.0 2.64e-01 78.3% 61.1%
3985012 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.52 38.0 3.78e-01 82.6% 94.7%