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KX190832.1__ANT39960.1__BMBtpLA1_30__00030
Bact-VirKX190832.1__ANT39960.1__BMBtpLA1_30__00030
Identity
- Accession:
- KX190832 ↗
- Kingdom:
- phage
Quality
67.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-79
D2
medium
residues 164-232
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 41.0 | 3.26e-01 | 72.5% | 32.4% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 46.0 | 4.42e-01 | 81.2% | 83.1% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 47.0 | 4.08e-01 | 82.6% | 71.6% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 45.0 | 3.84e-01 | 79.7% | 70.8% |
| 1wqsA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 44.0 | 3.91e-01 | 79.7% | 86.4% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 40.0 | 3.29e-01 | 71.0% | 87.1% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 41.0 | 3.48e-01 | 75.4% | 52.0% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 45.0 | 3.83e-01 | 87.0% | 69.7% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 3.67e-01 | 81.2% | 75.4% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.57 | 46.0 | 4.06e-01 | 88.4% | 79.4% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.37e-01 | 81.2% | 74.3% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 44.0 | 3.17e-01 | 84.1% | 34.1% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 3.49e-01 | 71.0% | 54.8% |
| 5jqkA03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 48.0 | 3.21e-01 | 98.6% | 76.8% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.47e-01 | 78.3% | 53.6% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 40.0 | 3.63e-01 | 81.2% | 68.0% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 45.0 | 3.64e-01 | 100.0% | 93.0% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 42.0 | 2.99e-01 | 88.4% | 68.8% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 39.0 | 3.21e-01 | 79.7% | 90.3% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.54 | 45.0 | 3.56e-01 | 100.0% | 92.6% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.53 | 40.0 | 3.61e-01 | 87.0% | 95.4% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.53 | 38.0 | 3.72e-01 | 78.3% | 76.2% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.31e-01 | 79.7% | 58.8% |
| 5hwtB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.32e-01 | 81.2% | 62.3% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 42.0 | 2.78e-01 | 91.3% | 59.2% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.53 | 43.0 | 3.59e-01 | 95.7% | 98.5% |
| 2veaA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 39.0 | 3.21e-01 | 84.1% | 42.3% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.35e-01 | 81.2% | 49.5% |
| 2pd8B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 37.0 | 3.02e-01 | 75.4% | 55.0% |
| 5svgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.35e-01 | 82.6% | 62.8% |
| 3h9wA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.55e-01 | 87.0% | 56.9% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.45e-01 | 82.6% | 92.7% |
| 2kdkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.30e-01 | 78.3% | 54.1% |
| 4ehoA04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.39e-01 | 88.4% | 51.6% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.03e-01 | 82.6% | 37.8% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 40.0 | 2.64e-01 | 87.0% | 74.3% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.28e-01 | 81.2% | 52.7% |
| 2y69F00 | 2.60.11.10 | Mainly Beta › Sandwich › Cytochrome C Oxidase; Chain F › Cytochrome c oxidase, subunit Vb | 0.51 | 34.0 | 3.16e-01 | 73.9% | 52.7% |
| 3lifB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 41.0 | 3.31e-01 | 92.8% | 88.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3714845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 44.0 | 3.66e-01 | 71.0% | 66.4% |
| 1019414 | 6122.1.1.1 ↗ | a+b two layers › N-terminal domain of spumavirus gag protein › N-terminal domain of spumavirus gag protein › N-terminal domain of spumavirus gag protein › Gag_spuma_N | 0.65 | 48.0 | 3.65e-01 | 81.2% | 61.8% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.64 | 48.0 | 4.37e-01 | 82.6% | 83.2% |
| 4110113 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.63 | 51.0 | 3.54e-01 | 89.9% | 68.8% |
| 4158399 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.63 | 53.0 | 3.98e-01 | 98.6% | 81.1% |
| 3340613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.31e-01 | 76.8% | 100.0% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.62 | 42.0 | 4.10e-01 | 72.5% | 64.0% |
| 5062858 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.61 | 45.0 | 3.82e-01 | 78.3% | 51.3% |
| 3192391 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 46.0 | 3.89e-01 | 85.5% | 76.9% |
| 4029956 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.60 | 44.0 | 2.88e-01 | 76.8% | 41.7% |
| 3214289 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 51.0 | 4.36e-01 | 97.1% | 73.0% |
| 3663984 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.60 | 45.0 | 3.32e-01 | 82.6% | 40.0% |
| 4969129 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 42.0 | 3.75e-01 | 75.4% | 57.1% |
| 4024274 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.60 | 43.0 | 3.76e-01 | 78.3% | 50.5% |
| 3460576 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.59 | 41.0 | 2.84e-01 | 73.9% | 49.6% |
| 4342104 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.59 | 50.0 | 3.81e-01 | 100.0% | 66.5% |
| 3606567 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.59 | 43.0 | 3.17e-01 | 76.8% | 77.3% |
| 3812138 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.59 | 40.0 | 3.02e-01 | 71.0% | 52.0% |
| 185601 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.59 | 45.0 | 3.98e-01 | 84.1% | 74.5% |
| 4354982 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.59 | 46.0 | 3.61e-01 | 85.5% | 51.6% |
| 4946348 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.58 | 40.0 | 2.63e-01 | 71.0% | 19.0% |
| 3187444 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.57 | 44.0 | 3.77e-01 | 84.1% | 82.6% |
| 3739561 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.57 | 45.0 | 3.42e-01 | 85.5% | 49.1% |
| 4931757 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 44.0 | 3.76e-01 | 87.0% | 58.3% |
| 3279239 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 43.0 | 3.74e-01 | 84.1% | 60.9% |
| 3588721 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.57 | 41.0 | 3.53e-01 | 78.3% | 53.0% |
| 1780568 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.56 | 42.0 | 3.57e-01 | 85.5% | 64.8% |
| 3816397 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 44.0 | 3.62e-01 | 88.4% | 86.7% |
| 5019943 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.56 | 43.0 | 3.60e-01 | 87.0% | 50.8% |
| 3188712 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.56 | 38.0 | 3.42e-01 | 71.0% | 59.0% |
| None | — | 0.55 | 41.0 | 2.90e-01 | 79.7% | 42.2% | |
| 134941 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.55 | 41.0 | 3.66e-01 | 82.6% | 58.1% |
| 3557902 | 101.1.2.580 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEPDC5_CTD | 0.55 | 40.0 | 3.58e-01 | 84.1% | 52.9% |
| 3671474 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.55 | 42.0 | 2.73e-01 | 84.1% | 76.6% |
| 3357381 | 6.1.1.2 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume | 0.55 | 48.0 | 3.51e-01 | 100.0% | 92.8% |
| 3193496 | 286.1.1.3 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PrpF | 0.54 | 45.0 | 3.34e-01 | 100.0% | 86.0% |
| 3433553 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.54 | 42.0 | 2.74e-01 | 88.4% | 95.9% |
| 3830082 | 4295.1.1.0 ↗ | beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.54 | 42.0 | 2.92e-01 | 87.0% | 67.1% |
| 3607858 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 43.0 | 3.80e-01 | 89.9% | 75.2% |
| 4951182 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 41.0 | 3.41e-01 | 87.0% | 57.8% |
| 3520317 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 41.0 | 3.67e-01 | 88.4% | 94.3% |
| 3705073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 36.0 | 3.22e-01 | 71.0% | 52.0% |
| 4929294 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.52 | 41.0 | 3.13e-01 | 89.9% | 78.3% |
| 4986976 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.52 | 39.0 | 3.39e-01 | 85.5% | 51.7% |
| 3281357 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 40.0 | 3.20e-01 | 85.5% | 42.8% |
| 5018462 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 40.0 | 2.80e-01 | 87.0% | 23.5% |
| 3980186 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.51 | 42.0 | 3.32e-01 | 98.6% | 86.5% |
| 3494737 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.51 | 40.0 | 3.79e-01 | 89.9% | 95.3% |
| 3621160 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.51 | 40.0 | 3.81e-01 | 89.9% | 96.5% |
| 4984595 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.51 | 39.0 | 2.81e-01 | 89.9% | 28.0% |
| 1840644 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.51 | 37.0 | 3.28e-01 | 81.2% | 52.7% |
| 4107278 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.50 | 41.0 | 2.88e-01 | 94.2% | 69.2% |
| 5047585 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.50 | 37.0 | 3.29e-01 | 85.5% | 52.5% |