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KX198614.1__ANO57536.1__X__00085

Bact-Vir

KX198614.1__ANO57536.1__X__00085

Identity

Accession:
KX198614 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-60
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25713.2 best N4_GP8 56.4 4.80e-15 98.1% 85.7%
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.77 68.0 5.56e-01 100.0% 57.9%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.76 67.0 5.43e-01 100.0% 55.0%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.74 64.0 5.15e-01 100.0% 54.8%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.73 62.0 5.10e-01 100.0% 57.0%
2knoA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.72 62.0 4.94e-01 100.0% 68.2%
1h9oA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.71 60.0 4.88e-01 100.0% 51.9%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.71 46.0 4.08e-01 84.6% 45.5%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.70 59.0 4.49e-01 100.0% 81.1%
3bfmA02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 41.0 4.45e-01 76.9% 69.8%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 58.0 4.74e-01 98.1% 66.3%
3gceA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.69 51.0 4.04e-01 78.8% 67.3%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 50.0 3.78e-01 78.8% 36.6%
3mwxA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 58.0 3.58e-01 100.0% 48.1%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.66 57.0 4.57e-01 100.0% 64.8%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.66 56.0 4.96e-01 100.0% 79.7%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.65 40.0 3.99e-01 73.1% 58.2%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 38.0 4.00e-01 82.7% 60.4%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.64 50.0 4.13e-01 90.4% 60.8%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.64 44.0 3.60e-01 73.1% 46.5%
7lt2A01 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.64 47.0 3.04e-01 78.8% 67.8%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 50.0 3.85e-01 86.5% 73.4%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.62 47.0 3.63e-01 82.7% 52.9%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.62 44.0 3.75e-01 76.9% 83.1%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.62 45.0 3.71e-01 80.8% 87.3%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.21e-01 98.1% 99.4%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.61 50.0 3.19e-01 98.1% 96.4%
1bm8A00 3.10.260.10 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain 0.60 51.0 4.16e-01 98.1% 98.0%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.60 50.0 3.16e-01 100.0% 95.7%
2qpzA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.59 53.0 4.24e-01 100.0% 59.2%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.59 45.0 3.72e-01 98.1% 42.7%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 44.0 3.53e-01 100.0% 39.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.52e-01 88.5% 46.0%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 3.50e-01 84.6% 45.9%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 51.0 3.77e-01 100.0% 49.3%
2e4qA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 51.0 4.01e-01 100.0% 59.3%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.57 41.0 3.29e-01 78.8% 45.5%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.57 42.0 3.17e-01 96.2% 32.1%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.57 46.0 4.02e-01 98.1% 73.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 40.0 3.17e-01 94.2% 34.2%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 3.56e-01 90.4% 56.9%
4g41A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.55 47.0 3.14e-01 100.0% 88.1%
3eeiA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.55 44.0 3.04e-01 100.0% 89.6%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.55 47.0 3.52e-01 98.1% 49.6%
2de6A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 46.0 4.48e-01 98.1% 89.7%
2wb8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.07e-01 94.2% 73.9%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 42.0 3.48e-01 94.2% 78.7%
1z01A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 45.0 4.31e-01 100.0% 95.1%
1l8rA00 3.10.260.20 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski 0.52 40.0 3.42e-01 94.2% 81.2%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.51 38.0 3.09e-01 82.7% 44.2%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4002401 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.77 67.0 5.35e-01 100.0% 52.4%
3518621 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.74 65.0 4.95e-01 100.0% 44.0%
3733522 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.73 53.0 3.58e-01 76.9% 43.8%
3258975 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.73 61.0 5.08e-01 100.0% 56.0%
3839291 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.71 44.0 2.78e-01 86.5% 12.8%
3622643 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.71 48.0 4.11e-01 71.2% 49.4%
3984091 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.69 54.0 4.35e-01 88.5% 60.0%
3949260 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.68 48.0 3.81e-01 100.0% 36.4%
5073695 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.66 48.0 4.02e-01 82.7% 82.0%
223484 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.66 57.0 4.57e-01 100.0% 64.8%
3967950 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 48.0 5.04e-01 100.0% 91.1%
3712663 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 55.0 4.58e-01 98.1% 78.9%
5052666 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.64 51.0 4.31e-01 92.3% 72.3%
3604203 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 46.0 4.08e-01 78.8% 100.0%
3283603 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 4.03e-01 80.8% 94.1%
3588455 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.63 42.0 3.82e-01 92.3% 50.0%
3989333 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.62 41.0 3.97e-01 92.3% 58.3%
3799467 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.62 46.0 3.30e-01 80.8% 60.0%
3577264 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 48.0 3.40e-01 90.4% 28.7%
4003103 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.62 45.0 3.49e-01 86.5% 46.9%
4958458 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.61 53.0 3.91e-01 96.2% 45.3%
4259070 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.60 47.0 4.85e-01 86.5% 88.0%
4928595 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.60 45.0 3.75e-01 92.3% 42.9%
5011912 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.60 54.0 4.37e-01 100.0% 66.3%
3913166 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.59 53.0 4.14e-01 100.0% 57.3%
4928128 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.59 51.0 4.07e-01 96.2% 56.3%
3022623 101.1.11.3 alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.59 40.0 3.53e-01 71.2% 44.6%
5076315 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.59 52.0 3.89e-01 100.0% 47.3%
3836621 66.1.1.2 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 0.59 48.0 3.54e-01 100.0% 34.3%
4320387 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.58 52.0 3.79e-01 100.0% 46.4%
3971751 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 52.0 4.12e-01 100.0% 62.9%
3947244 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 50.0 3.77e-01 100.0% 45.9%
4929704 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 52.0 3.78e-01 100.0% 45.0%
3603228 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 51.0 4.17e-01 98.1% 57.9%
4929594 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 52.0 4.24e-01 100.0% 66.3%
3921260 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 44.0 3.46e-01 100.0% 37.5%
4210311 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.58 51.0 4.01e-01 100.0% 58.3%
3604653 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.57 44.0 2.67e-01 84.6% 25.8%
3400699 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 42.0 3.41e-01 80.8% 92.4%
3596855 66.1.1.0 beta sandwiches › ISP domain › ISP domain › ISP domain 0.57 50.0 3.64e-01 100.0% 41.4%
3942940 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.57 50.0 4.06e-01 100.0% 96.0%
3222216 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 47.0 4.36e-01 100.0% 98.6%
4928691 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.57 50.0 4.04e-01 100.0% 63.0%
4929360 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 49.0 3.81e-01 100.0% 54.8%
5047657 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 45.0 4.53e-01 96.2% 92.7%
5025865 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 50.0 3.98e-01 100.0% 60.6%
3884574 66.1.1.3 beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox 0.56 49.0 3.57e-01 100.0% 42.8%
4259152 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 48.0 3.89e-01 100.0% 60.0%
5009165 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.55 49.0 3.84e-01 100.0% 56.9%
3609816 66.1.1.3 beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox 0.55 47.0 3.50e-01 100.0% 41.4%
4988530 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.54 47.0 3.84e-01 100.0% 100.0%
3287700 2484.2.1.0 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.54 45.0 3.84e-01 98.1% 57.6%
3483861 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.53 45.0 4.00e-01 100.0% 68.8%
3888996 101.1.9.4 alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.52 42.0 3.56e-01 94.2% 83.2%
4944561 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.52 42.0 3.55e-01 100.0% 64.0%
3367714 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.51 39.0 2.90e-01 92.3% 67.6%
3529465 101.1.9.4 alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno 0.51 40.0 3.36e-01 94.2% 77.1%