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KX198615.1__ANO57568.1__X__00031

Bact-Vir

KX198615.1__ANO57568.1__X__00031

Identity

Accession:
KX198615 ↗
Kingdom:
phage

Quality

56.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-128
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 47.0 4.34e-01 79.1% 90.8%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.63 47.0 4.74e-01 78.3% 100.0%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.61 46.0 4.77e-01 80.9% 97.2%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.60 39.0 4.68e-01 74.8% 98.7%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 54.0 4.32e-01 100.0% 90.9%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 30.0 3.54e-01 77.4% 69.6%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.56 42.0 3.96e-01 78.3% 75.0%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 41.0 3.92e-01 79.1% 92.7%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 36.0 3.82e-01 100.0% 74.5%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 29.0 3.05e-01 81.7% 56.9%
5abxA00 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.52 37.0 3.28e-01 74.8% 72.8%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 3.51e-01 80.9% 68.6%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.50 41.0 3.59e-01 91.3% 95.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3585855 382.1.1.3 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp 0.65 37.0 3.99e-01 82.6% 65.3%
4527793 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.61 46.0 4.16e-01 80.0% 91.1%
3509752 219.1.1.50 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 0.61 36.0 2.56e-01 79.1% 19.4%
3272455 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 48.0 4.46e-01 83.5% 100.0%
4940484 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.58 28.0 3.28e-01 84.3% 63.7%
4944328 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 44.0 4.27e-01 80.9% 81.5%
5010618 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 29.0 3.67e-01 97.4% 88.9%
4540762 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.55 34.0 3.59e-01 85.2% 67.3%
5041381 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.54 39.0 3.75e-01 77.4% 97.9%
4976695 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.54 40.0 4.45e-01 93.9% 97.8%
3329738 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.53 31.0 3.45e-01 81.7% 75.3%
4531300 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.53 30.0 3.39e-01 73.9% 74.1%
4376351 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.52 31.0 3.39e-01 73.0% 72.2%
4052470 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.52 29.0 3.25e-01 73.0% 70.6%
3450682 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.60e-01 95.7% 60.0%
4994567 2484.1.1.22 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 0.50 37.0 3.28e-01 78.3% 93.1%
D2 medium residues 166-255
PDB