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KX227757.1__ANT40171.1__X__00031

Bact-Vir

KX227757.1__ANT40171.1__X__00031

Identity

Accession:
KX227757 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hubeivirus› Bacillus_phage_PfEFR-4

TaxID: 1868598

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-81
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 57.0 5.44e-01 93.6% 66.7%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 55.0 5.45e-01 93.6% 75.6%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 5.75e-01 85.9% 78.8%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 52.0 5.24e-01 94.9% 74.7%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 55.0 5.85e-01 87.2% 90.0%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 51.0 5.19e-01 84.6% 78.9%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 54.0 5.66e-01 91.0% 93.0%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 46.0 4.96e-01 83.3% 95.4%
3aagA01 3.40.1380.40 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › 0.57 41.0 3.38e-01 76.9% 41.3%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 35.0 3.60e-01 100.0% 70.7%
2wyhB04 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.53 42.0 3.94e-01 88.5% 84.2%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 30.0 2.88e-01 70.5% 44.1%
1fadA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.53 42.0 3.97e-01 89.7% 83.2%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.99e-01 75.6% 91.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4177900 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 63.0 7.08e-01 94.9% 100.0%
3589821 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 60.0 6.36e-01 84.6% 84.3%
3590127 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 64.0 6.16e-01 91.0% 76.1%
3965190 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 59.0 6.41e-01 82.1% 95.4%
4125247 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 58.0 5.61e-01 78.2% 82.4%
5071803 101.45.1.0 ↗ alpha arrays › HTH › DNA polymerase II large subunit DP2 helical domain › DNA polymerase II large subunit DP2 helical domain 0.75 55.0 5.33e-01 82.1% 70.6%
3944622 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 55.0 5.49e-01 89.7% 77.5%
4234863 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 55.0 5.65e-01 94.9% 86.7%
4999897 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 54.0 5.49e-01 80.8% 84.0%
3989752 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 56.0 5.72e-01 88.5% 86.7%
3059487 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 56.0 5.41e-01 92.3% 76.7%
4448496 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.71 51.0 5.37e-01 91.0% 85.7%
2775 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 55.0 5.47e-01 87.2% 79.3%
3940276 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.68 54.0 5.53e-01 87.2% 98.7%
2767750 101.1.4.8 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.66 48.0 4.77e-01 94.9% 72.6%
4583223 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.61 35.0 4.16e-01 73.1% 81.8%
5005042 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 50.0 4.61e-01 92.3% 72.0%
5072115 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.28e-01 89.7% 67.6%
4977146 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 4.25e-01 89.7% 74.0%
4968016 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.56 46.0 4.15e-01 94.9% 72.2%
4971221 101.1.6.42 ↗ alpha arrays › HTH › HTH › TrpR › HTH_24 0.55 46.0 4.13e-01 92.3% 69.1%
4998511 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.54 44.0 4.12e-01 87.2% 74.7%