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KX231828.1__ANN86165.1__BI096_gp40__00054

Bact-Vir

KX231828.1__ANN86165.1__BI096_gp40__00054

Identity

Accession:
KX231828 ↗
Kingdom:
phage

Quality

78.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aryavirus› Enterobacter_phage_Arya

TaxID: 1864622

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 90-162
PDB
Domain cluster: rep: MK291445.1__AZV00424.1__pyei1_p07__00007__D165-223
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04447.18 best dATP-dGTP_PPHyd 104.3 4.80e-30 100.0% 74.2%
D2 high residues 185-244
PDB
Domain cluster: rep: MH128984.1__AWD90823.1__X__00032__D52-96
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.66 51.0 4.49e-01 88.3% 85.6%
1ss6A01 3.30.420.210 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › SEP domain 0.63 46.0 4.55e-01 80.0% 89.2%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.59 31.0 3.58e-01 75.0% 72.5%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.57 42.0 3.28e-01 80.0% 67.9%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 38.0 2.92e-01 73.3% 95.6%
2eaqA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 41.0 3.70e-01 81.7% 84.3%
3kt7A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.54 41.0 2.88e-01 88.3% 74.0%
2mnjB00 2.60.40.4160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.33e-01 73.3% 54.5%
3nkdA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.53 34.0 3.12e-01 75.0% 46.4%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 39.0 3.22e-01 86.7% 96.2%
4emiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 36.0 2.61e-01 73.3% 42.0%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 34.0 2.17e-01 70.0% 18.3%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.50 40.0 2.32e-01 91.7% 8.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3825395 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 43.0 4.17e-01 71.7% 90.0%
3817237 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 42.0 3.95e-01 70.0% 86.7%
3182789 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 41.0 3.55e-01 70.0% 99.0%
3546896 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 41.0 3.62e-01 71.7% 90.5%
5001639 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 48.0 3.19e-01 85.0% 29.8%
11196 2484.1.1.56 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR 0.60 43.0 3.03e-01 78.3% 72.9%
3808933 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.59 40.0 3.88e-01 71.7% 87.1%
5019257 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 44.0 2.82e-01 78.3% 22.1%
3378252 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 40.0 3.86e-01 71.7% 87.1%
3489435 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 40.0 3.82e-01 70.0% 88.6%
3827578 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 39.0 3.87e-01 70.0% 98.5%
3284535 295.1.1.13 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 0.58 44.0 3.67e-01 86.7% 91.7%
3328008 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 40.0 3.70e-01 71.7% 87.3%
2623870 2484.1.1.44 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pox_A22 0.57 41.0 3.13e-01 78.3% 39.6%
3669518 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.57 44.0 3.70e-01 90.0% 90.4%
4956750 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.55 38.0 2.33e-01 71.7% 14.3%
3274238 1021.1.1.2 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.55 38.0 3.59e-01 86.7% 57.3%
4016385 2006.1.1.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.55 41.0 2.95e-01 83.3% 98.4%
5012906 2498.2.1.6 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › S_layer_C 0.55 37.0 2.60e-01 71.7% 64.1%
5024507 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 38.0 2.33e-01 73.3% 13.5%
2092580 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 36.0 2.95e-01 70.0% 57.4%
4600820 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.53 37.0 3.63e-01 86.7% 67.7%
5064033 2003.1.3.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.53 37.0 2.64e-01 75.0% 40.4%
4877472 220.3.1.3 ↗ beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 0.53 37.0 2.94e-01 78.3% 77.3%
4798110 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 35.0 2.73e-01 70.0% 31.9%
3402152 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 39.0 3.25e-01 85.0% 84.2%
3935794 1.1.1.6 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.52 40.0 3.06e-01 85.0% 87.6%
3348776 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.51 38.0 2.34e-01 81.7% 13.7%
2094867 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 35.0 2.58e-01 73.3% 28.5%
3703169 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.51 35.0 2.68e-01 75.0% 98.8%
D3 medium residues 1-80
PDB