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KX257490.2__ANJ65521.1__X__00014

Bact-Vir

KX257490.2__ANJ65521.1__X__00014

Identity

Accession:
KX257490 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudoalteromonas_virus_vB_PspP-H6/1

TaxID: 1852626

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-86
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yu0A01 2.10.10.30 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.74 55.0 5.52e-01 100.0% 80.4%
1x6cA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 55.0 4.33e-01 100.0% 49.2%
3kw2A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.64 54.0 4.95e-01 98.0% 91.2%
1goiB03 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.61 48.0 4.78e-01 100.0% 84.3%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 52.0 4.11e-01 100.0% 47.2%
2p13A00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.59 47.0 4.05e-01 92.0% 62.4%
4jivD00 2.60.200.60 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 41.0 3.45e-01 76.0% 46.2%
1r3eA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.55 47.0 4.04e-01 100.0% 84.5%
7syvx01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 42.0 3.29e-01 96.0% 59.1%
2m2lA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 34.0 3.19e-01 70.0% 46.3%
4ku0D00 2.60.200.60 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 42.0 3.51e-01 98.0% 80.2%
6jn7A01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.51 39.0 2.81e-01 90.0% 61.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4504459 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 55.0 4.88e-01 100.0% 90.7%
4258656 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 54.0 4.77e-01 100.0% 91.9%
3559486 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 52.0 3.87e-01 100.0% 47.1%
5040856 3174.1.1.1 ↗ beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_L14 0.61 44.0 3.32e-01 78.0% 36.9%
3264176 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 51.0 3.92e-01 100.0% 40.8%
2740084 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 50.0 4.03e-01 100.0% 48.2%
3400395 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 48.0 3.84e-01 100.0% 42.6%
4024591 239.1.1.5 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.57 45.0 3.72e-01 92.0% 88.0%
4009007 64.3.1.0 ↗ beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.57 46.0 4.62e-01 100.0% 92.0%
3643317 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.54 37.0 3.30e-01 76.0% 46.3%
2080134 3232.1.2.0 ↗ alpha arrays › PB2 '627' domain-related › PB2 '627' domain-related 0.53 44.0 3.24e-01 100.0% 34.7%
4891006 5.1.5.230 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › CFAP43_N 0.52 40.0 2.59e-01 96.0% 26.8%
2573963 325.1.6.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.51 39.0 2.77e-01 90.0% 58.1%