Back to structures

KX257490.2__ANJ65546.1__X__00038

Bact-Vir

KX257490.2__ANJ65546.1__X__00038

Identity

Accession:
KX257490 ↗
Kingdom:
phage

Quality

75.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-96
PDB
D2 high residues 140-233
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.60 42.0 3.83e-01 73.4% 65.6%
3vkgA15 1.10.8.1220 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 42.0 4.25e-01 75.5% 83.0%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 32.0 3.57e-01 97.9% 69.9%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 30.0 3.29e-01 91.5% 61.8%
6xz3A01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 38.0 3.60e-01 70.2% 73.5%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.55 44.0 4.39e-01 85.1% 90.7%
6elqA01 1.20.1270.30 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 41.0 3.40e-01 83.0% 92.0%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 29.0 2.98e-01 100.0% 53.5%
5mmjn01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 29.0 2.98e-01 100.0% 53.9%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.52 41.0 3.56e-01 88.3% 60.1%
5nl6B01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 37.0 3.42e-01 77.7% 87.6%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032563 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.66 46.0 4.34e-01 73.4% 84.3%
5072615 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.64 44.0 4.21e-01 70.2% 90.0%
3286734 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.64 40.0 4.00e-01 74.5% 60.0%
5070523 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.60 49.0 4.92e-01 89.4% 90.5%
3941508 148.1.3.57 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF5375 0.59 52.0 5.21e-01 95.7% 98.9%
4971099 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.59 40.0 4.14e-01 70.2% 76.7%
3232705 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.57 47.0 4.43e-01 89.4% 77.4%
3820373 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.56 42.0 4.32e-01 79.8% 96.7%
4434723 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.55 40.0 4.06e-01 76.6% 97.9%
3281161 632.22.1.100 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF28103 0.55 39.0 4.12e-01 74.5% 89.4%
3453526 3930.1.1.0 alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.54 37.0 3.43e-01 71.3% 89.6%
4992431 3930.1.1.3 alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.54 37.0 3.38e-01 70.2% 83.2%
3823991 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.53 40.0 3.84e-01 78.7% 78.1%
3799718 11.2.1.25 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 0.53 39.0 2.84e-01 77.7% 95.2%
4959839 2007.6.1.0 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.52 38.0 2.86e-01 76.6% 86.7%
4028148 101.1.17.2 alpha arrays › HTH › HTH › FF domain › FF 0.52 39.0 4.35e-01 89.4% 100.0%
3726423 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 45.0 3.66e-01 100.0% 76.7%