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KX268652.1__ANT40719.1__TRS1_07__00007

Bact-Vir

KX268652.1__ANT40719.1__TRS1_07__00007

Identity

Accession:
KX268652 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acinetobacter_phage_vB_AbaS_TRS1

TaxID: 1852629

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 23-55_82-106_281-323
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 35.0 3.76e-01 89.1% 76.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4008034 223.1.1.113 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.55 35.0 3.00e-01 100.0% 38.8%
5016233 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 40.0 4.01e-01 92.1% 74.1%
None — 0.54 31.0 2.69e-01 98.0% 34.5%
3196528 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.54 31.0 3.81e-01 92.1% 95.0%
3983134 223.1.1.113 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.52 34.0 3.41e-01 100.0% 65.0%
4184401 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 35.0 3.06e-01 100.0% 43.8%
3383226 1.1.11.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › DUF7271 0.51 31.0 3.24e-01 92.1% 67.8%
3851316 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.50 44.0 3.76e-01 99.0% 70.6%
D2 medium residues 107-280_324-338
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1neiA00 3.30.160.220 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG 0.66 15.0 2.73e-01 74.1% 58.3%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.65 22.0 3.03e-01 72.5% 55.3%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 24.0 3.51e-01 76.7% 100.0%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.52 21.0 3.35e-01 89.4% 97.1%
1h3gA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 25.0 3.53e-01 78.8% 95.6%
2uvaG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 25.0 2.86e-01 77.2% 58.8%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2546181 2485.3.1.13 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp13-like 0.77 73.0 5.98e-01 100.0% 66.9%
4313471 2485.3.1.11 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.70 66.0 5.58e-01 100.0% 64.0%
4929755 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.69 64.0 5.62e-01 100.0% 72.0%
3626191 11.1.1.891 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26189 0.57 28.0 3.98e-01 84.7% 95.8%
4001917 11.1.1.891 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26189 0.56 29.0 3.90e-01 84.7% 93.0%
1404 11.1.1.119 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cyc-maltodext_N 0.52 25.0 3.48e-01 78.8% 92.5%
3481056 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.52 12.0 2.38e-01 89.4% 96.6%
3256333 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 25.0 3.27e-01 78.3% 83.8%