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KX268652.1__ANT40779.1__TRS1_67__00067
Bact-VirKX268652.1__ANT40779.1__TRS1_67__00067
Identity
- Accession:
- KX268652 ↗
- Kingdom:
- phage
Quality
76.6
mean pLDDT
Taxonomy
TaxID: 1852629
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-88
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a57A00 | 2.60.270.30 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin | 0.64 | 54.0 | 4.28e-01 | 94.5% | 99.4% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.62 | 45.0 | 3.91e-01 | 76.7% | 93.9% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 45.0 | 3.13e-01 | 100.0% | 23.5% |
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.59 | 41.0 | 3.45e-01 | 74.0% | 41.7% |
| 3eesA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 49.0 | 4.07e-01 | 94.5% | 89.3% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 42.0 | 4.19e-01 | 76.7% | 94.7% |
| 2z5bA00 | 3.30.230.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 50.0 | 4.21e-01 | 100.0% | 74.8% |
| 2qdlA02 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.57 | 37.0 | 3.57e-01 | 100.0% | 57.8% |
| 3gwyB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 48.0 | 3.97e-01 | 94.5% | 90.2% |
| 5cfjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 47.0 | 3.87e-01 | 95.9% | 95.0% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 40.0 | 3.90e-01 | 76.7% | 97.6% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 4.07e-01 | 80.8% | 88.3% |
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 48.0 | 3.92e-01 | 98.6% | 93.4% |
| 2ghfA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 40.0 | 3.81e-01 | 93.2% | 65.2% |
| 2r5vA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 39.0 | 3.19e-01 | 79.5% | 90.7% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 3.63e-01 | 100.0% | 88.8% |
| 5kvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 36.0 | 2.84e-01 | 74.0% | 37.7% |
| 1zunB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 47.0 | 3.41e-01 | 100.0% | 70.7% |
| 2x9zA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.52 | 37.0 | 3.27e-01 | 76.7% | 84.1% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 43.0 | 3.73e-01 | 100.0% | 81.3% |
| 1xhsA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.51 | 41.0 | 3.61e-01 | 90.4% | 94.7% |
| 2pmzB05 | 3.90.1070.20 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.50 | 36.0 | 3.52e-01 | 75.3% | 70.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034390 | 101.1.2.453 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DnaB | 0.62 | 44.0 | 3.54e-01 | 75.3% | 70.0% |
| 3650144 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 44.0 | 2.74e-01 | 76.7% | 31.4% |
| None | — | 0.61 | 45.0 | 2.91e-01 | 100.0% | 17.6% | |
| 3441980 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 43.0 | 3.89e-01 | 78.1% | 100.0% |
| 3436847 | 2.2.1.12 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › DUF7851 | 0.58 | 48.0 | 4.17e-01 | 97.3% | 66.9% |
| 3419370 | 6063.1.1.0 ↗ | alpha duplicates or obligate multimers › BNIP3 transmembrane domain › BNIP3 transmembrane domain › BNIP3 transmembrane domain | 0.57 | 31.0 | 3.64e-01 | 71.2% | 76.0% |
| 3722325 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.55 | 48.0 | 3.69e-01 | 98.6% | 82.9% |
| 4978284 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 48.0 | 4.14e-01 | 100.0% | 70.8% |
| 4933431 | 4961.1.1.1 ↗ | a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4 | 0.55 | 40.0 | 3.73e-01 | 76.7% | 65.6% |
| 8345 | 386.1.1.41 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf_C2H2_ZHX | 0.53 | 38.0 | 4.14e-01 | 80.8% | 94.8% |
| 5048560 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.52 | 45.0 | 3.36e-01 | 100.0% | 38.3% |
| 4648785 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 47.0 | 3.49e-01 | 100.0% | 81.7% |
| 4027323 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 39.0 | 2.84e-01 | 84.9% | 71.9% |
| 3619375 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.52 | 40.0 | 2.62e-01 | 86.3% | 93.2% |
| 3627479 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.51 | 37.0 | 3.14e-01 | 76.7% | 68.0% |
| 4990783 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 40.0 | 2.91e-01 | 87.7% | 75.3% |
| 4254001 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.51 | 45.0 | 3.33e-01 | 100.0% | 89.5% |
| 5052576 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.51 | 42.0 | 3.13e-01 | 100.0% | 36.2% |