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KX349275.1__AOO08070.1__W1080709_067__00062
Bact-VirKX349275.1__AOO08070.1__W1080709_067__00062
Identity
- Accession:
- KX349275 ↗
- Kingdom:
- phage
Quality
65.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Nerrivikvirus›
Synechococcus_phage_S-RIM2
TaxID: 687800
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-49
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.66 | 50.0 | 3.36e-01 | 83.3% | 63.9% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.64e-01 | 93.8% | 92.2% |
| 6nyyE01 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.51 | 37.0 | 2.67e-01 | 83.3% | 62.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3864252 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.70 | 51.0 | 4.77e-01 | 79.2% | 85.0% |
| 3632212 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.67 | 52.0 | 5.36e-01 | 83.3% | 86.7% |
| 4028034 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 50.0 | 4.35e-01 | 81.2% | 54.3% |
| 3733845 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.67 | 50.0 | 4.35e-01 | 79.2% | 54.3% |
| 3502093 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 50.0 | 4.34e-01 | 81.2% | 54.3% |
| 4023440 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 50.0 | 4.61e-01 | 81.2% | 63.3% |
| 4000903 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.65 | 45.0 | 5.07e-01 | 75.0% | 100.0% |
| 3339340 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.64 | 47.0 | 3.95e-01 | 81.2% | 47.5% |
| 3559152 | 386.1.1.299 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30478 | 0.61 | 42.0 | 4.19e-01 | 72.9% | 80.0% |
| 3786204 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.60 | 50.0 | 2.88e-01 | 95.8% | 65.3% |
| 3205171 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 52.0 | 4.40e-01 | 100.0% | 67.5% |
| 3991839 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 43.0 | 4.63e-01 | 79.2% | 95.0% |
| 3655226 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.52 | 44.0 | 3.26e-01 | 100.0% | 64.4% |