←Back to structures

KX365747.1__ANY29537.1__X__00026

Bact-Vir

KX365747.1__ANY29537.1__X__00026

Identity

Accession:
KX365747 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudoalteromonas_phage_PH1

TaxID: 1874540

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-110
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.64 45.0 4.33e-01 100.0% 63.6%
2epgB00 3.90.1860.10 Alpha Beta › Alpha-Beta Complex › tRNA-splicing ligase RtcB › tRNA-splicing ligase RtcB 0.59 54.0 3.31e-01 100.0% 23.7%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.54 45.0 3.36e-01 89.6% 99.0%
4n6cB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.54 47.0 3.65e-01 100.0% 86.7%
5cofA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.54 47.0 3.68e-01 100.0% 88.4%
3dv9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 43.0 4.47e-01 96.1% 97.1%
1f68A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.54 44.0 4.01e-01 90.9% 96.1%
5ulcX00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.53 46.0 3.97e-01 96.1% 82.0%
5uiyA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.53 43.0 3.93e-01 92.2% 93.5%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.53 45.0 4.50e-01 97.4% 90.0%
1ailA00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.52 32.0 3.36e-01 81.8% 67.1%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.52 45.0 4.59e-01 94.8% 98.6%
3ipiA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 45.0 3.15e-01 100.0% 63.4%
7mi0A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 40.0 3.04e-01 87.0% 40.3%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 36.0 3.32e-01 92.2% 58.0%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.50 45.0 3.57e-01 100.0% 80.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4236190 140.1.1.4 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 0.69 41.0 3.14e-01 97.4% 27.1%
3403505 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 38.0 3.92e-01 98.7% 58.7%
5059668 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 44.0 3.96e-01 92.2% 52.4%
3900113 5054.1.1.9 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel 0.61 47.0 3.09e-01 89.6% 21.0%
3956174 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.58 46.0 3.64e-01 93.5% 41.9%
3992475 5054.1.1.9 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel 0.58 51.0 3.82e-01 100.0% 64.0%
3542170 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.58 36.0 3.56e-01 85.7% 58.7%
4146099 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.57 43.0 4.01e-01 80.5% 100.0%
4867516 5054.1.1.58 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › YVC1_C 0.56 50.0 4.17e-01 98.7% 76.3%
3215369 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.55 50.0 3.41e-01 100.0% 46.3%
3503507 101.1.1.278 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_DNAJC9 0.55 36.0 3.34e-01 97.4% 54.7%
3490234 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.54 48.0 4.17e-01 100.0% 63.3%
3404343 192.29.1.1 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.54 46.0 4.32e-01 89.6% 80.0%
3229918 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 42.0 3.81e-01 83.1% 75.0%
4508874 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.52 45.0 4.23e-01 97.4% 81.1%
3279009 620.1.1.5 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N 0.51 43.0 3.50e-01 93.5% 85.5%
3398009 101.1.1.112 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.51 40.0 3.83e-01 84.4% 78.9%