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KX365748.1__ANY29626.1__X__00061
Bact-VirKX365748.1__ANY29626.1__X__00061
Identity
- Accession:
- KX365748 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-96
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.59 | 41.0 | 3.99e-01 | 81.0% | 67.2% |
| 3nhqC03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.58 | 46.0 | 3.55e-01 | 91.4% | 70.6% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.58 | 45.0 | 4.20e-01 | 91.4% | 67.1% |
| 1whzA00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.55 | 39.0 | 3.75e-01 | 82.8% | 63.8% |
| 2v6bC02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.54 | 40.0 | 3.16e-01 | 87.9% | 45.6% |
| 1y56B02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.54 | 41.0 | 3.14e-01 | 86.2% | 39.7% |
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.80e-01 | 86.2% | 72.5% |
| 4zgfA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 43.0 | 3.31e-01 | 94.8% | 83.7% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 41.0 | 3.08e-01 | 100.0% | 67.9% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.51 | 39.0 | 3.51e-01 | 89.7% | 58.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3608263 | 327.10.1.12 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › PSP1 | 0.64 | 48.0 | 4.52e-01 | 86.2% | 77.3% |
| 5028908 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.63 | 48.0 | 4.53e-01 | 87.9% | 74.7% |
| 2485676 | 292.3.1.1 ↗ | a+b two layers › RIP/Polo-box domain › TipC soluble domain › TipC soluble domain › TipC | 0.60 | 51.0 | 3.70e-01 | 100.0% | 75.8% |
| 3582655 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.59 | 41.0 | 3.63e-01 | 74.1% | 67.8% |
| 5072739 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 43.0 | 3.83e-01 | 79.3% | 54.1% |
| 3602440 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.59 | 47.0 | 4.31e-01 | 96.6% | 84.7% |
| 3336169 | 2003.1.5.213 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS, tRNA_U5-meth_tr | 0.58 | 46.0 | 2.83e-01 | 93.1% | 20.0% |
| 5019046 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.58 | 44.0 | 4.51e-01 | 89.7% | 89.1% |
| 4961020 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 44.0 | 4.35e-01 | 89.7% | 76.9% |
| 5040890 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.57 | 44.0 | 4.36e-01 | 96.6% | 83.3% |
| 3940050 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.56 | 42.0 | 2.98e-01 | 87.9% | 60.0% |
| 3448591 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 39.0 | 4.08e-01 | 91.4% | 88.0% |
| 3238244 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 39.0 | 3.58e-01 | 79.3% | 77.6% |
| 3236833 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.54 | 45.0 | 2.99e-01 | 100.0% | 86.4% |
| 3220940 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.54 | 42.0 | 3.36e-01 | 87.9% | 76.8% |
| 3953180 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.53 | 42.0 | 3.83e-01 | 94.8% | 70.6% |
| 3616382 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 39.0 | 3.90e-01 | 91.4% | 80.0% |
| 3781819 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 39.0 | 2.81e-01 | 87.9% | 45.5% |
| 3925891 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.69e-01 | 96.6% | 96.7% |
| 4016866 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 44.0 | 3.59e-01 | 100.0% | 73.9% |
| 2485685 | 5.5.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like | 0.51 | 31.0 | 3.50e-01 | 74.1% | 79.1% |
| 5061538 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 36.0 | 3.68e-01 | 75.9% | 78.2% |
| 4955280 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.51 | 39.0 | 3.74e-01 | 89.7% | 85.7% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.51 | 40.0 | 3.78e-01 | 93.1% | 88.0% |
| 3439202 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.50 | 36.0 | 3.18e-01 | 75.9% | 55.3% |
| 4587781 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 40.0 | 3.61e-01 | 91.4% | 100.0% |