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KX397364.2__ANZ48165.1__ASESINO_152__00140
Bact-VirKX397364.2__ANZ48165.1__ASESINO_152__00140
Identity
- Accession:
- KX397364 ↗
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Erskinevirus›
Erwinia_phage_vB_EamM_Asesino
TaxID: 1883370
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i8oA03 | 1.10.8.1130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain | 0.81 | 53.0 | 5.07e-01 | 72.9% | 59.7% |
| 3t6pA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.71 | 60.0 | 5.87e-01 | 96.6% | 95.5% |
| 3n0xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 49.0 | 3.37e-01 | 83.1% | 22.7% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 40.0 | 3.83e-01 | 71.2% | 52.9% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.65 | 52.0 | 3.64e-01 | 89.8% | 28.8% |
| 4yt2A02 | 1.20.120.1300 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain | 0.65 | 45.0 | 3.67e-01 | 72.9% | 40.6% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.63 | 42.0 | 4.05e-01 | 83.1% | 58.8% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.63 | 43.0 | 3.80e-01 | 72.9% | 95.5% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.63 | 49.0 | 4.13e-01 | 91.5% | 82.1% |
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 42.0 | 4.05e-01 | 79.7% | 62.9% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 42.0 | 3.12e-01 | 74.6% | 64.1% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.60 | 48.0 | 3.29e-01 | 89.8% | 93.8% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.59 | 41.0 | 3.60e-01 | 72.9% | 48.9% |
| 4b8cJ01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.58 | 44.0 | 3.15e-01 | 84.7% | 95.0% |
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.57 | 45.0 | 4.07e-01 | 91.5% | 70.1% |
| 1tteA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 42.0 | 4.25e-01 | 84.7% | 94.7% |
| 4otpA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 45.0 | 3.41e-01 | 91.5% | 92.3% |
| 2af6A02 | 6.10.140.450 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.85e-01 | 83.1% | 74.2% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.53 | 40.0 | 3.73e-01 | 84.7% | 96.1% |
| 2mygA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 39.0 | 3.42e-01 | 89.8% | 95.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234723 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.67 | 48.0 | 4.07e-01 | 74.6% | 72.6% |
| 3988414 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.65 | 46.0 | 3.77e-01 | 74.6% | 41.8% |
| 3557614 | 170.1.1.28 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › PF25914 | 0.64 | 47.0 | 4.69e-01 | 83.1% | 78.3% |
| 3338165 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.62 | 36.0 | 3.66e-01 | 71.2% | 56.7% |
| 3791858 | 1128.1.1.3 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › UQCC2_CBP6 | 0.61 | 49.0 | 4.27e-01 | 88.1% | 84.4% |
| 3704066 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.61 | 49.0 | 2.91e-01 | 89.8% | 58.2% |
| 4969368 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 44.0 | 4.53e-01 | 78.0% | 83.6% |
| 3277096 | 4299.1.1.1 ↗ | alpha arrays › BSD domain › BSD domain › BSD domain › BSD | 0.59 | 45.0 | 3.85e-01 | 81.4% | 88.4% |
| 4021753 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 45.0 | 4.10e-01 | 88.1% | 88.2% |
| 4945541 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.58 | 47.0 | 3.64e-01 | 100.0% | 90.0% |
| 3838410 | 148.1.3.55 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C | 0.58 | 42.0 | 4.14e-01 | 79.7% | 87.7% |
| 3929511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 42.0 | 4.36e-01 | 79.7% | 94.5% |
| 4946290 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.88e-01 | 74.6% | 69.2% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 38.0 | 3.59e-01 | 76.3% | 60.0% |
| 3172062 | 10.1.1.19 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like | 0.51 | 37.0 | 2.41e-01 | 81.4% | 46.5% |
D2
medium
residues 60-140
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qx3A04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.62 | 48.0 | 4.46e-01 | 87.7% | 66.0% |
| 2aj4B03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 51.0 | 4.09e-01 | 92.6% | 82.1% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 39.0 | 3.63e-01 | 74.1% | 52.9% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.59 | 48.0 | 4.02e-01 | 90.1% | 52.2% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 38.0 | 4.39e-01 | 80.2% | 96.4% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 37.0 | 3.90e-01 | 71.6% | 71.6% |
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.57 | 41.0 | 3.81e-01 | 85.2% | 59.6% |
| 7e5aB02 | 1.20.1000.10 | Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain | 0.57 | 49.0 | 4.00e-01 | 100.0% | 80.5% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 49.0 | 4.07e-01 | 98.8% | 59.5% |
| 2b9wA02 | 1.10.405.20 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › | 0.56 | 48.0 | 4.19e-01 | 93.8% | 70.3% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 39.0 | 3.90e-01 | 72.8% | 76.8% |
| 5xnyA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.55 | 40.0 | 3.73e-01 | 82.7% | 59.8% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.55 | 36.0 | 3.83e-01 | 72.8% | 77.5% |
| 4ixjA02 | 3.30.1690.20 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › | 0.54 | 41.0 | 3.46e-01 | 85.2% | 81.6% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 38.0 | 3.72e-01 | 77.8% | 67.0% |
| 2fd5A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.85e-01 | 96.3% | 68.9% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 37.0 | 3.93e-01 | 75.3% | 81.9% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 42.0 | 3.79e-01 | 88.9% | 69.5% |
| 4lqqB00 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.53 | 39.0 | 3.30e-01 | 80.2% | 63.0% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 39.0 | 2.96e-01 | 81.5% | 71.5% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.52 | 39.0 | 3.39e-01 | 82.7% | 85.0% |
| 1pw4A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 41.0 | 3.20e-01 | 93.8% | 80.7% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 41.0 | 4.01e-01 | 87.7% | 78.7% |
| 1jeyB03 | 1.10.1600.10 | Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › | 0.50 | 36.0 | 3.42e-01 | 76.5% | 93.1% |
| 1x52A01 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.50 | 40.0 | 3.65e-01 | 86.4% | 88.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781081 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.64 | 45.0 | 4.74e-01 | 84.0% | 85.7% |
| 4927779 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 52.0 | 3.68e-01 | 90.1% | 87.3% |
| 4343661 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.62 | 44.0 | 3.96e-01 | 75.3% | 69.3% |
| 4066056 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.61 | 44.0 | 3.93e-01 | 75.3% | 68.7% |
| 4453306 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.61 | 47.0 | 4.20e-01 | 88.9% | 58.8% |
| 4019840 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.59 | 47.0 | 4.08e-01 | 84.0% | 65.8% |
| 5040843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.59 | 39.0 | 3.69e-01 | 71.6% | 56.8% |
| 4075001 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.59 | 42.0 | 3.80e-01 | 75.3% | 69.9% |
| 3504160 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.58 | 47.0 | 4.32e-01 | 90.1% | 68.2% |
| 3311973 | 101.1.2.97 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA_C | 0.57 | 41.0 | 4.36e-01 | 87.7% | 90.0% |
| 3462217 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 41.0 | 3.99e-01 | 86.4% | 70.0% |
| 3249906 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.56 | 42.0 | 4.18e-01 | 85.2% | 77.6% |
| 3976906 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.55 | 42.0 | 3.66e-01 | 84.0% | 57.1% |
| 4113590 | 3754.1.1.2 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4,MraY_sig1 | 0.54 | 43.0 | 2.93e-01 | 90.1% | 73.3% |
| 4248016 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 42.0 | 3.22e-01 | 92.6% | 45.0% |
| 5060802 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 34.0 | 3.39e-01 | 79.0% | 63.5% |
| 3491110 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 41.0 | 3.69e-01 | 84.0% | 80.0% |
| 3617270 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.52 | 41.0 | 3.41e-01 | 84.0% | 77.1% |
| 3471625 | 109.60.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › RPAP3 C-terminal domain-like › RPAP3 C-terminal domain-like › RPAP3_C | 0.52 | 39.0 | 3.29e-01 | 80.2% | 54.3% |
| 4008705 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.51 | 41.0 | 3.74e-01 | 91.4% | 69.6% |