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KX397372.1__ANZ50403.1__PHOBOS_213__00213

Bact-Vir

KX397372.1__ANZ50403.1__PHOBOS_213__00213

Identity

Accession:
KX397372 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Derbicusvirus› Erwinia_phage_vB_EamM_Phobos

TaxID: 1883377

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 154-331
PDB
Domain cluster: rep: MK308677.1__QAX97145.1__X__00201__D6-173
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b3wA00 1.10.357.40 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like 0.75 57.0 5.89e-01 96.1% 82.7%
8bauA01 1.10.357.40 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like 0.68 58.0 5.84e-01 89.9% 91.7%
4z7fB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.57 34.0 3.53e-01 100.0% 60.7%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 23.0 3.34e-01 87.1% 97.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3279758 4308.1.1.1 ↗ a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.77 56.0 6.07e-01 89.3% 87.9%
3264987 4308.1.1.1 ↗ a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.77 57.0 6.32e-01 96.6% 93.1%
3999783 4308.1.1.0 ↗ a+b complex topology › YbiA-like › YbiA-like › YbiA-like 0.64 56.0 5.31e-01 93.8% 85.7%
3616804 4308.1.1.1 ↗ a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.64 56.0 5.51e-01 93.8% 94.2%
4510378 1037.1.1.1 ↗ alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT 0.55 40.0 3.65e-01 75.3% 91.4%
4520905 1037.1.1.1 ↗ alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT 0.55 40.0 3.53e-01 75.3% 90.7%
4512385 620.1.1.2 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB 0.53 41.0 4.26e-01 84.3% 85.9%
4552859 621.1.1.3 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB 0.52 37.0 3.49e-01 73.0% 86.7%
D2 medium residues 11-134
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xtck00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 32.0 3.62e-01 77.4% 71.1%
8b9zK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 30.0 3.40e-01 77.4% 71.4%
2xq2A01 1.20.1730.10 Mainly Alpha › Up-down Bundle › Sodium/glucose cotransporter › Sodium/glucose cotransporter 0.52 47.0 3.11e-01 100.0% 83.4%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.51 37.0 3.27e-01 75.0% 72.2%
2oifB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.50 37.0 3.51e-01 77.4% 84.1%