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KX405003.1__ANT42408.1__BPS15Q2_52__00052

Bact-Vir

KX405003.1__ANT42408.1__BPS15Q2_52__00052

Identity

Accession:
KX405003 ↗
Kingdom:
phage

Quality

69.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Andersonviridae› Felixounavirus› Salmonella_phage_BPS15Q2

TaxID: 1857100

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-54
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.69 47.0 3.14e-01 88.7% 20.3%
5swsE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 49.0 3.85e-01 75.5% 56.8%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.68 47.0 3.35e-01 71.7% 24.2%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.66 46.0 2.57e-01 73.6% 53.9%
5edxA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 3.62e-01 75.5% 57.0%
1eajB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 45.0 3.53e-01 75.5% 78.3%
4jfhE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 45.0 3.55e-01 75.5% 72.2%
7l15A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 44.0 3.51e-01 77.4% 51.3%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 49.0 3.68e-01 88.7% 92.0%
1tvdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 3.60e-01 81.1% 74.1%
1cpyA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 47.0 2.91e-01 86.8% 84.0%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.58 49.0 3.54e-01 94.3% 94.0%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.57 45.0 3.37e-01 90.6% 86.5%
3i7tA00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.54 43.0 3.37e-01 88.7% 94.1%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 2.70e-01 79.2% 26.8%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.53 41.0 3.08e-01 90.6% 93.0%
4q0mA01 3.40.50.1170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › L-asparaginase, N-terminal domain 0.53 37.0 2.58e-01 73.6% 37.2%
1c16A01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 40.0 2.98e-01 90.6% 93.3%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.52 39.0 2.75e-01 83.0% 27.1%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.52 36.0 2.85e-01 73.6% 52.9%
3ohsX02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 40.0 2.73e-01 96.2% 21.9%
3pl2A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 38.0 2.45e-01 81.1% 50.9%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 45.0 2.89e-01 100.0% 73.8%
3h5kA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.51 43.0 3.00e-01 96.2% 37.9%
3pgbA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 2.91e-01 77.4% 87.9%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 37.0 2.69e-01 79.2% 95.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3850704 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.75 49.0 2.98e-01 71.7% 11.4%
3585710 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.73 46.0 3.30e-01 88.7% 23.4%
5038696 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.70 41.0 3.03e-01 84.9% 22.2%
3877399 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.70 50.0 3.62e-01 75.5% 60.7%
2797181 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.68 48.0 3.64e-01 73.6% 52.9%
5083971 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.68 40.0 3.27e-01 84.9% 31.6%
4250547 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.68 46.0 3.42e-01 71.7% 45.7%
3791558 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.67 47.0 2.84e-01 71.7% 21.2%
4968913 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.67 40.0 3.56e-01 86.8% 41.3%
4979591 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.67 39.0 3.58e-01 84.9% 42.9%
3970247 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.65 40.0 3.18e-01 96.2% 30.0%
4577366 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.65 38.0 2.55e-01 86.8% 14.8%
3859041 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.65 49.0 3.54e-01 81.1% 66.0%
3229415 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 40.0 3.61e-01 96.2% 44.0%
3921953 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.64 45.0 3.51e-01 73.6% 58.3%
5039659 2006.1.4.10 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 0.64 45.0 2.89e-01 75.5% 21.5%
3704272 2004.1.1.175 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.63 48.0 2.95e-01 83.0% 77.0%
4345162 304.48.1.11 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.63 34.0 2.44e-01 73.6% 16.9%
5047531 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.62 39.0 3.48e-01 94.3% 45.3%
3902780 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 43.0 3.40e-01 71.7% 75.2%
4975601 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.61 36.0 3.41e-01 84.9% 44.6%
3739795 223.1.1.23 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.61 45.0 3.02e-01 79.2% 70.5%
4016513 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.57 42.0 3.40e-01 100.0% 41.0%
4172782 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.57 34.0 2.56e-01 84.9% 21.4%
5014186 243.6.1.14 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C1 0.57 34.0 2.55e-01 84.9% 20.7%
3546411 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.56 41.0 2.55e-01 79.2% 88.2%
4422213 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.54 37.0 2.72e-01 86.8% 24.5%
3844355 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.54 39.0 2.98e-01 79.2% 42.2%
165042 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.53 40.0 2.92e-01 96.2% 28.2%
4411265 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.53 35.0 2.54e-01 86.8% 21.8%
4981752 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.52 39.0 2.82e-01 81.1% 54.8%
4468816 7516.1.1.24 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.51 42.0 2.81e-01 100.0% 62.4%
5040295 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 36.0 3.62e-01 79.2% 98.2%
4142264 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.50 36.0 2.84e-01 79.2% 36.7%
3889956 5.1.3.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.50 40.0 2.98e-01 100.0% 86.5%