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KX455876.1__ANZ52225.1__Ahp2_43__00043

Bact-Vir

KX455876.1__ANZ52225.1__Ahp2_43__00043

Identity

Accession:
KX455876 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_Ahp2

TaxID: 1873997

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-94
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.71 56.0 5.74e-01 100.0% 88.7%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.69 48.0 5.19e-01 100.0% 88.3%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 53.0 5.28e-01 100.0% 78.9%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 52.0 4.56e-01 98.6% 54.6%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 49.0 5.10e-01 95.9% 82.1%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.67 53.0 5.19e-01 100.0% 79.7%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.65 49.0 4.33e-01 95.9% 54.7%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.65 49.0 4.54e-01 97.3% 62.2%
6p3xB01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.64 51.0 3.91e-01 95.9% 36.7%
1wfoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 44.0 3.94e-01 98.6% 51.0%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 54.0 4.62e-01 98.6% 57.7%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.61 52.0 3.55e-01 98.6% 79.6%
4jdeA01 2.60.40.3820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 46.0 3.78e-01 100.0% 43.8%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.61 51.0 5.02e-01 91.8% 100.0%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.30e-01 100.0% 56.7%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 42.0 3.57e-01 100.0% 44.4%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.59 51.0 3.68e-01 100.0% 32.9%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.98e-01 100.0% 57.3%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 3.93e-01 97.3% 59.6%
5b71E00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.57 40.0 3.76e-01 95.9% 59.1%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.46e-01 100.0% 37.0%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 36.0 3.23e-01 97.3% 45.4%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 42.0 3.87e-01 98.6% 63.2%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.55 49.0 4.69e-01 100.0% 84.5%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.91e-01 98.6% 59.6%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.83e-01 98.6% 58.6%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 36.0 3.12e-01 100.0% 41.5%
5m59A06 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 46.0 4.01e-01 95.9% 61.6%
3dshA01 2.60.200.10 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 45.0 3.40e-01 100.0% 87.6%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.52 42.0 3.04e-01 94.5% 93.8%
5jtwB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.47e-01 100.0% 56.6%
1xhnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.42e-01 97.3% 42.8%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 44.0 3.00e-01 100.0% 35.2%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.51 38.0 3.50e-01 95.9% 60.4%
4g3wA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 34.0 2.90e-01 75.3% 37.2%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 43.0 3.77e-01 100.0% 66.9%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3917143 304.100.1.0 ↗ a+b two layers › Alpha-beta plaits › PurS-like › PurS-like 0.75 57.0 6.22e-01 97.3% 100.0%
5033281 304.100.1.1 ↗ a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.71 58.0 6.10e-01 97.3% 98.5%
3551719 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.71 57.0 5.68e-01 100.0% 84.0%
4942818 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.71 58.0 4.67e-01 98.6% 46.4%
3517068 3115.1.1.6 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.68 53.0 5.61e-01 98.6% 93.8%
3508212 3115.1.1.6 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.66 53.0 5.43e-01 100.0% 90.0%
5028431 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 53.0 5.21e-01 98.6% 82.5%
3939070 11.1.1.1173 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.65 49.0 4.11e-01 100.0% 47.2%
4128974 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.65 52.0 5.07e-01 100.0% 80.0%
3338688 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.64 51.0 5.32e-01 94.5% 98.5%
223776 3115.4.1.1 ↗ a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.64 52.0 5.27e-01 100.0% 90.1%
5068178 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.63 51.0 4.73e-01 100.0% 70.5%
4871072 2492.1.1.23 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 0.62 50.0 3.70e-01 95.9% 34.0%
3411669 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 49.0 4.35e-01 100.0% 59.1%
3931538 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.22e-01 98.6% 58.1%
3540023 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.61 47.0 4.42e-01 98.6% 67.8%
4058527 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.61 48.0 4.49e-01 98.6% 69.5%
3593924 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.60 50.0 4.30e-01 98.6% 57.5%
3397468 11.1.1.822 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.60 40.0 3.59e-01 95.9% 48.6%
3211221 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.25e-01 98.6% 61.0%
3408652 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.75e-01 100.0% 41.2%
3905094 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.59 49.0 4.03e-01 100.0% 50.4%
3577596 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.59 51.0 4.15e-01 100.0% 77.2%
3478889 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 41.0 3.26e-01 100.0% 35.6%
4926801 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 3.72e-01 95.9% 47.4%
4928213 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.57 48.0 4.88e-01 93.2% 100.0%
3251650 10.2.1.84 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin 0.55 46.0 3.69e-01 95.9% 56.1%
3236419 11.1.4.63 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF870 0.55 44.0 3.79e-01 95.9% 55.7%
3285005 304.45.1.1 ↗ a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.55 49.0 3.73e-01 100.0% 62.4%
3740347 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 46.0 3.65e-01 98.6% 60.6%
3694327 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.54 44.0 3.01e-01 95.9% 32.8%
3915206 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 45.0 3.46e-01 95.9% 48.6%
4943952 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 42.0 3.48e-01 100.0% 46.4%
4332626 3532.1.1.0 ↗ alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase 0.53 43.0 2.58e-01 91.8% 44.5%
4029036 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 42.0 4.02e-01 95.9% 74.4%
3490403 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 44.0 3.75e-01 94.5% 88.3%
3249243 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 44.0 3.81e-01 97.3% 67.8%
3852865 2492.1.1.23 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 0.52 43.0 3.33e-01 98.6% 48.6%
3411379 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.51 44.0 3.47e-01 98.6% 64.6%
3702051 1116.1.1.0 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain 0.51 45.0 3.32e-01 100.0% 42.0%
3472190 2492.1.1.4 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.51 40.0 2.81e-01 95.9% 22.3%
3678489 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.51 39.0 2.92e-01 83.6% 62.5%
3813777 304.151.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase 0.51 45.0 4.01e-01 100.0% 98.1%
3493644 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.50 42.0 3.36e-01 98.6% 52.1%
4677137 219.1.1.50 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 0.50 42.0 2.61e-01 100.0% 18.9%
3333290 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.50 43.0 3.33e-01 100.0% 69.4%
3243337 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 3.68e-01 97.3% 62.6%
4029586 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.50 41.0 3.37e-01 95.9% 54.7%
3721982 304.14.1.0 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.50 41.0 3.85e-01 95.9% 100.0%