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KX507046.1__AOQ26777.1__X__00052
Bact-VirKX507046.1__AOQ26777.1__X__00052
Identity
- Accession:
- KX507046 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-78
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 33.0 | 3.57e-01 | 88.6% | 60.0% |
| 3vx8A01 | 3.40.140.100 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 C-terminal domain | 0.58 | 43.0 | 3.49e-01 | 80.0% | 83.0% |
| 6fnnB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 37.0 | 2.98e-01 | 70.0% | 92.4% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.54 | 30.0 | 3.50e-01 | 97.1% | 87.8% |
| 4bixB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 41.0 | 3.27e-01 | 84.3% | 87.8% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 43.0 | 3.01e-01 | 97.1% | 74.0% |
| 2g3mA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 2.89e-01 | 100.0% | 83.2% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 39.0 | 3.44e-01 | 88.6% | 54.2% |
| 2i00A03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.52 | 32.0 | 2.95e-01 | 100.0% | 46.3% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.51 | 43.0 | 3.30e-01 | 98.6% | 89.9% |
| 3jyoA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 39.0 | 3.26e-01 | 88.6% | 43.9% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 42.0 | 3.00e-01 | 94.3% | 88.2% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.51 | 39.0 | 2.45e-01 | 85.7% | 52.9% |
| 3c6fA01 | 3.30.240.20 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › bsu07140 like domains | 0.51 | 36.0 | 3.79e-01 | 77.1% | 91.9% |
| 4l68A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 38.0 | 2.71e-01 | 80.0% | 55.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965674 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 38.0 | 4.33e-01 | 88.6% | 76.0% |
| 3681608 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.60 | 41.0 | 2.69e-01 | 100.0% | 16.6% |
| 4958385 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.60 | 32.0 | 3.96e-01 | 90.0% | 90.0% |
| 4977389 | 3374.1.1.1 ↗ | a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › YceG | 0.59 | 42.0 | 3.39e-01 | 77.1% | 85.3% |
| 3268142 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.57 | 48.0 | 3.20e-01 | 98.6% | 45.6% |
| 4959003 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.56 | 46.0 | 4.16e-01 | 90.0% | 96.8% |
| 3595399 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.56 | 47.0 | 3.26e-01 | 98.6% | 36.2% |
| 3505784 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.56 | 46.0 | 3.23e-01 | 98.6% | 35.8% |
| 4525523 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.55 | 44.0 | 3.10e-01 | 90.0% | 57.5% |
| 5051097 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.55 | 44.0 | 4.21e-01 | 100.0% | 76.2% |
| 4934465 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.54 | 44.0 | 3.14e-01 | 98.6% | 36.5% |
| 1289574 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 40.0 | 3.25e-01 | 84.3% | 84.1% |
| 3512643 | 3767.1.1.2 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Dicer_platform | 0.53 | 42.0 | 3.18e-01 | 88.6% | 89.4% |
| 5080723 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 42.0 | 3.34e-01 | 90.0% | 91.0% |
| 2634195 | 2008.1.1.49 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_SinI | 0.53 | 42.0 | 3.00e-01 | 91.4% | 36.2% |
| 3949120 | 101.36.1.1 ↗ | alpha arrays › HTH › YetF C-terminal domain › YetF C-terminal domain › DUF421 | 0.52 | 36.0 | 3.96e-01 | 74.3% | 100.0% |
| 3744691 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.51 | 42.0 | 3.25e-01 | 91.4% | 66.9% |
| 3587508 | 101.36.1.1 ↗ | alpha arrays › HTH › YetF C-terminal domain › YetF C-terminal domain › DUF421 | 0.51 | 37.0 | 3.87e-01 | 77.1% | 98.3% |
| 185097 | 101.36.1.1 ↗ | alpha arrays › HTH › YetF C-terminal domain › YetF C-terminal domain › DUF421 | 0.50 | 36.0 | 3.76e-01 | 75.7% | 83.3% |
D2
high
residues 92-175
Domain cluster:
rep: HQ634157.1__AGH32084.1__VPHG_00017__00017__D69-150
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fkfD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 3.58e-01 | 85.7% | 96.4% |
| 4mdcD01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 37.0 | 3.40e-01 | 76.2% | 79.1% |
| 5vyoD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 38.0 | 2.99e-01 | 83.3% | 90.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945258 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 39.0 | 3.89e-01 | 83.3% | 88.9% |
| 3723177 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.50 | 32.0 | 3.71e-01 | 82.1% | 100.0% |