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KX507046.1__AOQ26785.1__X__00060
Bact-VirKX507046.1__AOQ26785.1__X__00060
Identity
- Accession:
- KX507046 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-47
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfvC00 | 6.10.250.2010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.88 | 62.0 | 5.50e-01 | 100.0% | 53.3% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.71 | 51.0 | 4.42e-01 | 79.1% | 49.3% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.70 | 57.0 | 4.06e-01 | 90.7% | 93.1% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.70 | 59.0 | 4.05e-01 | 95.3% | 39.2% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.66 | 48.0 | 3.16e-01 | 79.1% | 21.7% |
| 4ifdK02 | 6.10.250.2660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 45.0 | 4.97e-01 | 86.0% | 100.0% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.61 | 50.0 | 4.26e-01 | 88.4% | 77.3% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.60 | 46.0 | 2.78e-01 | 86.0% | 88.5% |
| 1pmtA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 40.0 | 3.17e-01 | 83.7% | 36.2% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 41.0 | 2.84e-01 | 86.0% | 44.9% |
| 2wnsA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 2.91e-01 | 95.3% | 24.9% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 2.93e-01 | 83.7% | 49.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.77 | 61.0 | 4.20e-01 | 88.4% | 37.2% |
| 5010468 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.66 | 51.0 | 3.54e-01 | 83.7% | 37.9% |
| 4989164 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 45.0 | 3.21e-01 | 97.7% | 80.8% |
D2
high
residues 53-103
Domain cluster:
representative
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o3oA01 | 2.40.128.690 | Mainly Beta › Beta Barrel › Lipocalin › YycH protein, domain 3-like | 0.72 | 57.0 | 4.39e-01 | 90.2% | 38.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.71 | 51.0 | 5.31e-01 | 86.3% | 89.1% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 59.0 | 4.62e-01 | 96.1% | 50.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 49.0 | 4.47e-01 | 98.0% | 55.6% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 51.0 | 3.64e-01 | 86.3% | 26.7% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.68 | 53.0 | 4.00e-01 | 100.0% | 33.8% |
| 4hoiB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 51.0 | 3.92e-01 | 84.3% | 36.8% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 59.0 | 5.04e-01 | 100.0% | 81.7% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 51.0 | 3.80e-01 | 84.3% | 31.2% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.67 | 47.0 | 4.10e-01 | 74.5% | 89.6% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.67 | 56.0 | 4.17e-01 | 98.0% | 35.7% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.66 | 50.0 | 3.92e-01 | 84.3% | 36.4% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 52.0 | 4.36e-01 | 90.2% | 80.4% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.66 | 46.0 | 4.00e-01 | 74.5% | 97.4% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 4.07e-01 | 98.0% | 70.2% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 48.0 | 3.97e-01 | 84.3% | 42.3% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 47.0 | 3.71e-01 | 82.4% | 36.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 53.0 | 4.84e-01 | 92.2% | 85.3% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.65 | 53.0 | 3.96e-01 | 98.0% | 40.3% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 50.0 | 3.76e-01 | 90.2% | 64.1% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 54.0 | 4.66e-01 | 100.0% | 90.7% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.64 | 48.0 | 3.56e-01 | 86.3% | 30.4% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.64 | 45.0 | 3.97e-01 | 74.5% | 96.0% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 49.0 | 3.89e-01 | 90.2% | 42.5% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 46.0 | 4.02e-01 | 78.4% | 94.9% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 47.0 | 3.78e-01 | 84.3% | 38.4% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 51.0 | 3.72e-01 | 98.0% | 56.7% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 46.0 | 3.61e-01 | 82.4% | 36.1% |
| 3h9wA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 46.0 | 3.74e-01 | 82.4% | 38.5% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 45.0 | 3.69e-01 | 84.3% | 38.2% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 43.0 | 3.71e-01 | 94.1% | 44.6% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 46.0 | 3.55e-01 | 84.3% | 33.3% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.62 | 47.0 | 3.75e-01 | 100.0% | 37.1% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.62 | 51.0 | 3.65e-01 | 98.0% | 60.8% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 45.0 | 3.57e-01 | 88.2% | 34.1% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 50.0 | 3.56e-01 | 96.1% | 29.1% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.62 | 46.0 | 3.41e-01 | 84.3% | 29.5% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 49.0 | 3.56e-01 | 90.2% | 68.9% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 41.0 | 3.33e-01 | 84.3% | 33.3% |
| 3plsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 47.0 | 3.84e-01 | 88.2% | 69.2% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.61 | 47.0 | 3.29e-01 | 90.2% | 27.7% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.60 | 46.0 | 3.87e-01 | 90.2% | 88.2% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 45.0 | 2.68e-01 | 88.2% | 32.2% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 47.0 | 3.59e-01 | 92.2% | 50.7% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 47.0 | 3.57e-01 | 94.1% | 70.9% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.59 | 46.0 | 3.85e-01 | 96.1% | 57.9% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 49.0 | 3.79e-01 | 98.0% | 44.5% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 48.0 | 3.92e-01 | 100.0% | 61.8% |
| 5jqkA03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.58 | 48.0 | 3.00e-01 | 94.1% | 24.2% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 43.0 | 3.53e-01 | 82.4% | 81.0% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.59e-01 | 84.3% | 41.7% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 47.0 | 3.26e-01 | 94.1% | 85.2% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.58 | 49.0 | 3.39e-01 | 98.0% | 68.5% |
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 42.0 | 3.39e-01 | 84.3% | 38.5% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 47.0 | 3.68e-01 | 100.0% | 85.8% |
| 3lyxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 43.0 | 3.39e-01 | 82.4% | 35.0% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.57 | 45.0 | 3.69e-01 | 96.1% | 74.5% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 47.0 | 2.91e-01 | 96.1% | 74.7% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 43.0 | 3.58e-01 | 88.2% | 100.0% |
| 7f79A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.56 | 45.0 | 3.24e-01 | 94.1% | 72.3% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 41.0 | 2.71e-01 | 84.3% | 34.0% |
| 4ehoA04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 39.0 | 3.11e-01 | 78.4% | 32.3% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.55 | 44.0 | 3.65e-01 | 92.2% | 68.0% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 41.0 | 3.15e-01 | 90.2% | 95.9% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.24e-01 | 90.2% | 75.0% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 45.0 | 3.39e-01 | 98.0% | 93.0% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.54 | 41.0 | 3.25e-01 | 94.1% | 61.3% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 2.98e-01 | 92.2% | 62.7% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.26e-01 | 92.2% | 61.4% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 40.0 | 3.23e-01 | 84.3% | 36.1% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 3.74e-01 | 100.0% | 71.7% |
| 1bywA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 38.0 | 3.18e-01 | 82.4% | 38.2% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.53 | 36.0 | 2.45e-01 | 74.5% | 44.1% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.74e-01 | 100.0% | 65.5% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.53 | 43.0 | 3.36e-01 | 100.0% | 48.0% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 45.0 | 4.18e-01 | 100.0% | 86.4% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 40.0 | 2.69e-01 | 94.1% | 97.3% |
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 2.56e-01 | 100.0% | 24.0% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.51 | 41.0 | 3.72e-01 | 100.0% | 84.0% |
| 5cflA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.51 | 43.0 | 3.21e-01 | 100.0% | 76.9% |
| 1zj8A04 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.51 | 39.0 | 2.99e-01 | 92.2% | 95.9% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 43.0 | 2.87e-01 | 96.1% | 27.2% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.50 | 39.0 | 3.63e-01 | 98.0% | 85.7% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.50 | 42.0 | 3.81e-01 | 98.0% | 83.8% |
| 3mfxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 3.13e-01 | 90.2% | 98.2% |
| 3vrdB03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.50 | 36.0 | 3.24e-01 | 86.3% | 54.1% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979052 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 64.0 | 5.39e-01 | 100.0% | 82.2% |
| 3460576 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.73 | 58.0 | 3.71e-01 | 98.0% | 18.1% |
| 3743164 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.72 | 55.0 | 3.30e-01 | 86.3% | 11.4% |
| 5008201 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.72 | 53.0 | 4.32e-01 | 84.3% | 43.2% |
| 3588583 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.71 | 51.0 | 3.78e-01 | 84.3% | 28.3% |
| 4949934 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.71 | 53.0 | 3.72e-01 | 84.3% | 24.7% |
| 5061316 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.69 | 52.0 | 3.88e-01 | 84.3% | 32.3% |
| 4997159 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.69 | 53.0 | 3.82e-01 | 84.3% | 29.7% |
| 3604329 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 56.0 | 3.80e-01 | 94.1% | 54.5% |
| 3214289 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 55.0 | 4.42e-01 | 96.1% | 69.6% |
| 4952183 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.69 | 51.0 | 4.16e-01 | 84.3% | 41.0% |
| 3041218 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.68 | 51.0 | 3.62e-01 | 82.4% | 25.3% |
| 397995 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.68 | 51.0 | 4.09e-01 | 88.2% | 39.8% |
| 3744012 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.68 | 51.0 | 3.10e-01 | 84.3% | 30.3% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.68 | 59.0 | 4.25e-01 | 100.0% | 38.0% |
| 3608162 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 54.0 | 3.92e-01 | 96.1% | 53.9% |
| 3687430 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.68 | 54.0 | 4.20e-01 | 96.1% | 76.9% |
| 3696153 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.68 | 53.0 | 3.30e-01 | 92.2% | 15.2% |
| 3926942 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.67 | 52.0 | 4.05e-01 | 86.3% | 39.1% |
| 4314840 | 2.1.1.239 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CaKB | 0.67 | 55.0 | 4.33e-01 | 98.0% | 65.0% |
| 3780695 | 7031.1.1.1 ↗ | a+b complex topology › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › CaKB | 0.67 | 57.0 | 4.36e-01 | 100.0% | 82.4% |
| 3634173 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.67 | 58.0 | 4.13e-01 | 100.0% | 36.8% |
| 4524081 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.67 | 49.0 | 3.68e-01 | 84.3% | 30.0% |
| 5002475 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.67 | 52.0 | 3.19e-01 | 90.2% | 16.9% |
| 3588379 | 375.1.1.90 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 | 0.67 | 52.0 | 4.84e-01 | 100.0% | 67.7% |
| 1560737 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.67 | 56.0 | 5.16e-01 | 100.0% | 87.0% |
| 3611718 | 3863.1.1.0 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) | 0.67 | 52.0 | 3.88e-01 | 86.3% | 88.7% |
| 3543555 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.67 | 50.0 | 3.79e-01 | 84.3% | 32.6% |
| 3971184 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.66 | 51.0 | 3.77e-01 | 86.3% | 31.4% |
| 3648413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 50.0 | 4.21e-01 | 92.2% | 46.7% |
| 3347601 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.66 | 56.0 | 4.04e-01 | 98.0% | 67.1% |
| 137752 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.66 | 50.0 | 3.92e-01 | 84.3% | 36.4% |
| 4979994 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.66 | 51.0 | 3.81e-01 | 86.3% | 32.6% |
| 4986976 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.66 | 50.0 | 3.85e-01 | 86.3% | 35.8% |
| 3625971 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.66 | 57.0 | 4.14e-01 | 100.0% | 39.3% |
| 5062858 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.66 | 48.0 | 3.81e-01 | 84.3% | 36.5% |
| 5045368 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.65 | 50.0 | 3.67e-01 | 86.3% | 30.7% |
| 3307397 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 56.0 | 4.14e-01 | 100.0% | 60.0% |
| 3971533 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.65 | 49.0 | 3.97e-01 | 84.3% | 41.9% |
| 5045369 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.65 | 47.0 | 3.80e-01 | 84.3% | 37.3% |
| 3891434 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.65 | 53.0 | 3.98e-01 | 96.1% | 47.1% |
| 3326221 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 56.0 | 4.61e-01 | 100.0% | 89.5% |
| 3490141 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.65 | 54.0 | 4.00e-01 | 98.0% | 69.0% |
| 2440125 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.64 | 50.0 | 3.84e-01 | 86.3% | 36.1% |
| 3626119 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.64 | 47.0 | 3.48e-01 | 84.3% | 27.7% |
| 5004469 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.64 | 51.0 | 3.47e-01 | 92.2% | 39.5% |
| 3892129 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.64 | 52.0 | 3.91e-01 | 96.1% | 46.4% |
| 4946011 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 46.0 | 3.66e-01 | 84.3% | 35.7% |
| 5002763 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.64 | 48.0 | 4.38e-01 | 86.3% | 61.4% |
| 4011641 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.63 | 51.0 | 3.81e-01 | 100.0% | 65.2% |
| 3578584 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.63 | 52.0 | 4.12e-01 | 94.1% | 79.1% |
| 3445177 | 9.1.1.10 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VDE | 0.63 | 49.0 | 3.48e-01 | 94.1% | 36.3% |
| 3703231 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.63 | 51.0 | 3.72e-01 | 98.0% | 71.5% |
| 1840644 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.63 | 47.0 | 3.78e-01 | 84.3% | 38.4% |
| 5045471 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 47.0 | 3.68e-01 | 84.3% | 35.8% |
| 5044807 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 55.0 | 4.75e-01 | 100.0% | 67.5% |
| 4175269 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.63 | 47.0 | 2.79e-01 | 84.3% | 9.5% |
| 5047585 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.62 | 46.0 | 3.60e-01 | 86.3% | 35.0% |
| 3239560 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.62 | 38.0 | 2.50e-01 | 74.5% | 13.0% |
| 4951931 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.62 | 45.0 | 3.61e-01 | 82.4% | 36.5% |
| 4986904 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 47.0 | 3.02e-01 | 86.3% | 16.9% |
| 4512621 | 223.1.1.83 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_13 | 0.62 | 47.0 | 3.47e-01 | 90.2% | 76.8% |
| 3282536 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 50.0 | 4.49e-01 | 100.0% | 81.2% |
| 2527953 | 5.1.2.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1861 | 0.60 | 48.0 | 3.00e-01 | 92.2% | 29.9% |
| 3515098 | 11.1.4.92 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › VPS13_VAB | 0.60 | 44.0 | 3.53e-01 | 80.4% | 37.4% |
| 3189324 | 375.1.1.319 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Saf4_Yju2 | 0.60 | 52.0 | 4.74e-01 | 100.0% | 72.9% |
| 3780897 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.60 | 46.0 | 2.99e-01 | 84.3% | 17.2% |
| 4999863 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 45.0 | 2.76e-01 | 84.3% | 12.8% |
| 4528481 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.59 | 48.0 | 4.04e-01 | 100.0% | 92.0% |
| 4492004 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.59 | 50.0 | 3.83e-01 | 100.0% | 69.5% |
| 3735309 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 48.0 | 4.02e-01 | 94.1% | 52.2% |
| 3284786 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.59 | 43.0 | 3.26e-01 | 84.3% | 29.3% |
| 3693249 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 49.0 | 3.78e-01 | 100.0% | 86.9% |
| 146272 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.58 | 47.0 | 4.19e-01 | 100.0% | 66.3% |
| 3185089 | 9.1.1.37 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 | 0.58 | 46.0 | 3.29e-01 | 96.1% | 40.8% |
| 5002153 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 48.0 | 3.97e-01 | 98.0% | 89.0% |
| 3224219 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 43.0 | 3.21e-01 | 92.2% | 38.2% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.57 | 48.0 | 3.92e-01 | 100.0% | 72.4% |
| 3209908 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 2.82e-01 | 100.0% | 15.3% |
| 3678985 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.56 | 45.0 | 3.80e-01 | 96.1% | 83.0% |
| 3658408 | 4325.1.1.13 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF4371 | 0.56 | 45.0 | 4.04e-01 | 92.2% | 92.0% |
| 3960716 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.56 | 42.0 | 3.55e-01 | 98.0% | 52.2% |
| 5001953 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.54 | 39.0 | 3.20e-01 | 84.3% | 36.5% |
| 3396837 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.54 | 42.0 | 3.96e-01 | 96.1% | 82.9% |
| 3641990 | 295.1.1.39 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF4371 | 0.54 | 40.0 | 3.74e-01 | 92.2% | 92.0% |
| 3459971 | 5084.5.3.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › PF28611 | 0.53 | 42.0 | 2.58e-01 | 86.3% | 20.3% |
| 4936091 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.53 | 44.0 | 2.75e-01 | 96.1% | 96.4% |
| 5044946 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 38.0 | 3.21e-01 | 84.3% | 42.0% |
| 3352475 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.53 | 40.0 | 3.63e-01 | 86.3% | 68.0% |
| 3057969 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 41.0 | 2.76e-01 | 98.0% | 100.0% |
| 2996613 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.52 | 41.0 | 2.63e-01 | 96.1% | 96.6% |
| 3284948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.67e-01 | 100.0% | 92.9% |
| 3651732 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.51 | 38.0 | 2.60e-01 | 92.2% | 25.6% |
| 5035122 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.51 | 37.0 | 2.78e-01 | 84.3% | 56.8% |