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KX507046.1__AOQ26889.1__X__00164

Bact-Vir

KX507046.1__AOQ26889.1__X__00164

Identity

Accession:
KX507046 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

TaxID: 1873905

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (73)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 60.0 5.85e-01 76.3% 69.8%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 6.41e-01 86.4% 83.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.81 60.0 4.53e-01 79.7% 35.1%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 5.79e-01 81.4% 73.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.02e-01 76.3% 50.6%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.85e-01 81.4% 74.6%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.79 61.0 4.98e-01 83.1% 96.3%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 6.27e-01 91.5% 94.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 6.04e-01 76.3% 90.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 59.0 6.02e-01 83.1% 83.9%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.78 56.0 5.76e-01 76.3% 80.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 6.22e-01 93.2% 90.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 5.44e-01 76.3% 70.3%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.77 68.0 4.76e-01 100.0% 64.7%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 4.55e-01 79.7% 42.9%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 6.09e-01 83.1% 90.7%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 55.0 5.08e-01 76.3% 60.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 52.0 5.65e-01 81.4% 93.3%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 54.0 5.38e-01 74.6% 73.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 51.0 5.77e-01 72.9% 100.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 5.43e-01 76.3% 73.8%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.06e-01 81.4% 72.6%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 51.0 5.55e-01 71.2% 100.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.73e-01 93.2% 76.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 4.72e-01 72.9% 56.2%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.11e-01 81.4% 68.8%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.07e-01 81.4% 74.1%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.21e-01 79.7% 69.7%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.23e-01 81.4% 73.3%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.27e-01 83.1% 71.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 4.71e-01 74.6% 55.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 5.24e-01 79.7% 71.9%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.25e-01 81.4% 43.2%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 66.0 4.25e-01 100.0% 53.5%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.88e-01 81.4% 59.0%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 5.09e-01 76.3% 69.2%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.93e-01 86.4% 58.6%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.17e-01 91.5% 68.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 52.0 5.39e-01 79.7% 94.5%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.71 52.0 3.96e-01 79.7% 46.1%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 5.35e-01 81.4% 91.4%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 5.65e-01 86.4% 94.1%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 49.0 4.68e-01 74.6% 64.3%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 51.0 3.52e-01 78.0% 59.3%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.23e-01 88.1% 78.5%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 5.25e-01 78.0% 100.0%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.68 59.0 4.42e-01 94.9% 40.8%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 50.0 5.22e-01 81.4% 98.1%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 59.0 5.02e-01 94.9% 59.6%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.68 59.0 4.61e-01 96.6% 54.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 58.0 4.88e-01 96.6% 57.3%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.17e-01 84.7% 76.9%
1zk8A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 46.0 5.00e-01 71.2% 97.8%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 51.0 3.60e-01 83.1% 60.2%
1irzA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 52.0 5.10e-01 86.4% 84.4%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.87e-01 88.1% 67.1%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 42.0 4.12e-01 81.4% 58.5%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.82e-01 86.4% 96.0%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.66 54.0 4.96e-01 93.2% 69.7%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.40e-01 88.1% 91.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.82e-01 86.4% 93.3%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.65 54.0 3.75e-01 94.9% 67.8%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.63 40.0 4.47e-01 74.6% 92.7%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 45.0 4.21e-01 78.0% 63.2%
3htaC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 48.0 3.44e-01 86.4% 60.8%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.62 41.0 4.48e-01 78.0% 87.0%
2hxoA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 44.0 4.42e-01 81.4% 96.8%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 45.0 4.12e-01 89.8% 60.5%
2iaiA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 43.0 4.24e-01 78.0% 76.9%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.58 44.0 4.00e-01 79.7% 79.2%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.57 48.0 4.16e-01 98.3% 84.4%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 39.0 3.61e-01 79.7% 94.6%
2vkhA03 1.10.10.1780 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 40.0 3.93e-01 93.2% 91.3%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3767621 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 64.0 5.67e-01 81.4% 57.5%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.84 62.0 5.98e-01 84.7% 70.8%
4624269 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 63.0 6.34e-01 81.4% 80.0%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 64.0 6.64e-01 88.1% 89.1%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 62.0 5.20e-01 81.4% 53.7%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 63.0 6.75e-01 96.6% 100.0%
5003692 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.80 56.0 5.49e-01 81.4% 67.7%
4861506 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.79 59.0 5.96e-01 79.7% 82.8%
4998375 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 62.0 5.41e-01 93.2% 57.6%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 58.0 5.36e-01 81.4% 61.3%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 61.0 4.85e-01 84.7% 41.7%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.78 58.0 6.15e-01 79.7% 94.0%
5042483 101.1.6.38 alpha arrays › HTH › HTH › TrpR › Sigma70_r4 0.78 59.0 4.77e-01 84.7% 43.6%
4102958 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.77 59.0 5.73e-01 81.4% 78.5%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 64.0 6.21e-01 96.6% 83.1%
3974513 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 55.0 5.99e-01 76.3% 100.0%
4977178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 5.58e-01 91.5% 66.7%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.77 60.0 5.86e-01 84.7% 86.2%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.77 61.0 5.02e-01 86.4% 49.5%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.77 54.0 5.83e-01 74.6% 88.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 56.0 5.65e-01 86.4% 78.3%
4998511 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.76 56.0 4.81e-01 81.4% 49.5%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.76 56.0 5.73e-01 79.7% 84.2%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 55.0 5.20e-01 83.1% 64.3%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.76 59.0 4.67e-01 84.7% 42.5%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.76 60.0 5.20e-01 86.4% 57.8%
4106860 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.76 60.0 5.12e-01 86.4% 54.7%
5071227 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.76 68.0 4.25e-01 100.0% 46.0%
3452941 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 59.0 6.27e-01 84.7% 100.0%
4133358 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 57.0 4.14e-01 79.7% 30.3%
4976482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 59.0 5.75e-01 93.2% 76.9%
4934128 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.75 56.0 4.28e-01 79.7% 37.7%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 57.0 4.77e-01 83.1% 48.0%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 56.0 5.61e-01 81.4% 78.3%
5014461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.88e-01 81.4% 100.0%
3969664 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.75 56.0 5.33e-01 79.7% 69.1%
4952959 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 56.0 5.30e-01 84.7% 68.6%
3279913 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 3.97e-01 83.1% 25.8%
5044734 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.74 57.0 4.45e-01 86.4% 39.2%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.74 54.0 5.75e-01 83.1% 92.0%
3973615 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 55.0 5.34e-01 79.7% 72.3%
4977146 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 4.56e-01 79.7% 48.0%
5072471 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 5.51e-01 94.9% 83.6%
5012367 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 55.0 5.70e-01 79.7% 89.1%
4970998 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.73 55.0 4.63e-01 81.4% 54.0%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.73 54.0 5.46e-01 79.7% 85.0%
None 0.73 66.0 4.27e-01 100.0% 52.2%
3365751 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.73 57.0 5.58e-01 86.4% 76.9%
3239905 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.73 55.0 4.91e-01 86.4% 56.5%
4350602 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.73 52.0 5.02e-01 74.6% 70.8%
4442301 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 5.66e-01 83.1% 92.0%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 62.0 5.67e-01 96.6% 73.8%
4437729 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.73 58.0 4.83e-01 86.4% 51.0%
3958096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 4.83e-01 93.2% 54.4%
5052144 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.99e-01 96.6% 92.7%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.72 57.0 5.87e-01 93.2% 92.7%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 53.0 5.62e-01 79.7% 98.0%
4648784 2005.1.1.47 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans 0.72 64.0 4.11e-01 100.0% 50.7%
3959929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 52.0 4.71e-01 76.3% 56.2%
3287545 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.72 55.0 4.98e-01 83.1% 68.8%
4957756 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.72 61.0 3.78e-01 94.9% 50.8%
5031872 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 56.0 5.65e-01 86.4% 88.3%
3971281 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.71 52.0 5.43e-01 81.4% 83.6%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.71 60.0 5.34e-01 98.3% 65.9%
4032673 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 62.0 4.13e-01 100.0% 25.3%
3707741 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.37e-01 96.6% 76.9%
3920862 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.70 53.0 5.57e-01 83.1% 100.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.70 52.0 4.92e-01 79.7% 73.2%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.70 50.0 4.91e-01 76.3% 69.2%
3919175 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.70 60.0 4.98e-01 98.3% 68.2%
4994133 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.70 50.0 4.45e-01 76.3% 54.1%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 59.0 5.77e-01 94.9% 87.7%
5013438 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.70 49.0 4.96e-01 74.6% 73.3%
4262428 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.70 61.0 3.83e-01 98.3% 58.4%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.70 51.0 4.87e-01 83.1% 67.1%
3280723 101.1.1.29 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.69 61.0 5.31e-01 100.0% 68.9%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 51.0 5.41e-01 83.1% 96.0%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 58.0 5.19e-01 94.9% 67.1%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 58.0 4.96e-01 94.9% 60.0%
3704770 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.69 56.0 4.37e-01 91.5% 53.8%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.68 59.0 4.63e-01 96.6% 54.4%
5034899 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.68 60.0 4.10e-01 100.0% 63.3%
3679768 101.1.2.454 alpha arrays › HTH › HTH › winged helix domain › FAM91_N 0.68 60.0 4.43e-01 98.3% 72.7%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 50.0 4.85e-01 89.8% 70.0%
3424337 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.68 56.0 5.09e-01 93.2% 75.0%
4876668 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.68 56.0 4.45e-01 93.2% 44.4%
3711347 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.67 55.0 4.24e-01 91.5% 38.6%
3428775 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 58.0 3.68e-01 100.0% 18.4%
5055780 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 44.0 4.93e-01 74.6% 100.0%
3620215 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.66 58.0 4.06e-01 100.0% 60.5%
3277186 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.65 54.0 4.30e-01 93.2% 45.6%
4456463 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.65 54.0 4.17e-01 93.2% 41.5%
3969341 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.64 50.0 4.05e-01 89.8% 45.6%
3586837 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.64 48.0 5.09e-01 81.4% 96.0%
4928203 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.63 57.0 3.93e-01 100.0% 40.2%
4024558 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.63 51.0 3.96e-01 93.2% 40.0%
4169333 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.61 50.0 4.03e-01 93.2% 46.4%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.60 50.0 3.34e-01 100.0% 50.9%
D2 medium residues 61-122
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 37.0 2.72e-01 83.9% 23.4%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.60 50.0 3.48e-01 98.4% 49.4%
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.56 41.0 3.18e-01 79.0% 81.4%
6s21B01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.56 45.0 2.87e-01 95.2% 77.0%
5m1pB00 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.55 41.0 2.90e-01 79.0% 77.2%
3ewiB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 42.0 3.25e-01 87.1% 84.8%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.53 39.0 3.22e-01 83.9% 43.5%
3od1A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 44.0 2.84e-01 96.8% 43.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.21e-01 72.6% 90.2%
1z7mC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 37.0 2.42e-01 77.4% 31.8%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 41.0 3.36e-01 72.6% 74.8%
4243212 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.59 42.0 2.43e-01 77.4% 7.3%
4959825 5054.1.1.7 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA 0.58 43.0 2.63e-01 85.5% 19.0%
3487134 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.58 38.0 3.39e-01 77.4% 46.7%
4922053 5093.1.1.4 a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly, Fibritin_C 0.57 41.0 2.52e-01 75.8% 25.7%
3276546 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.57 42.0 2.65e-01 79.0% 19.1%
3643078 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.57 47.0 3.16e-01 91.9% 55.2%
2126757 170.2.1.1 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p24 0.56 41.0 3.18e-01 79.0% 81.4%
5083025 301.4.1.1 a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA 0.55 39.0 3.21e-01 75.8% 61.6%
3587282 142.1.1.10 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › HTH_16 0.55 37.0 3.55e-01 72.6% 61.4%
3335794 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 39.0 2.64e-01 79.0% 20.0%
5073372 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.54 38.0 3.06e-01 75.8% 64.4%
3271689 2004.1.1.98 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.53 43.0 2.68e-01 88.7% 31.9%
3789199 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 39.0 3.24e-01 79.0% 66.1%
3281438 2005.1.1.95 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28097 0.53 43.0 2.89e-01 96.8% 80.5%
3701149 3548.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 0.53 39.0 3.38e-01 77.4% 69.5%
4681265 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.53 41.0 3.23e-01 83.9% 43.8%
3520489 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.53 25.0 3.21e-01 93.5% 73.3%
5022652 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.53 40.0 2.83e-01 83.9% 72.6%
4518250 109.4.1.1660 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27570 0.52 38.0 2.37e-01 79.0% 15.6%
3998381 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.52 40.0 2.71e-01 83.9% 89.0%
3601833 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 37.0 2.19e-01 77.4% 11.1%
4139988 3294.1.1.1 alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H 0.52 34.0 2.33e-01 80.6% 17.9%
3625681 389.1.1.115 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_4 0.52 28.0 3.37e-01 91.9% 80.0%
3165734 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.52 28.0 2.65e-01 95.2% 41.0%
4021257 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.52 41.0 2.71e-01 88.7% 51.4%
3939832 2006.1.6.39 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb 0.51 43.0 2.94e-01 96.8% 85.7%
4996711 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.51 45.0 3.60e-01 100.0% 75.2%
3630164 7022.1.1.0 alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein 0.51 39.0 2.61e-01 82.3% 39.6%
5034348 210.1.2.1 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.51 41.0 2.44e-01 98.4% 56.2%
4959771 2002.1.1.450 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › LAM_C 0.51 33.0 2.02e-01 79.0% 9.4%
3959944 3826.1.1.95 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RNA_pol_Rpb1_1 0.51 40.0 3.53e-01 88.7% 92.6%
185602 3452.1.1.1 a+b complex topology › P9-1 › P9-1 › P9-1 › Reo_P9 0.51 35.0 3.21e-01 72.6% 54.2%
3230113 4.1.1.315 beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.50 38.0 2.34e-01 82.3% 15.7%
3616581 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.50 36.0 2.31e-01 75.8% 19.4%