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KX522565.1__AOA49527.1__gwv_1095__00027
Bact-VirKX522565.1__AOA49527.1__gwv_1095__00027
Identity
- Accession:
- KX522565 ↗
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-151
Domain cluster:
rep: MN180249.1__QHJ75400.1__X__00002__D85-208
Pfam (9)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12796.14 best | Ank_2 | 46.9 | 4.70e-12 | 61.3% | 97.8% |
| PF12796.14 | Ank_2 | 60.3 | 3.10e-16 | 60.7% | 90.0% |
| PF13857.13 | Ank_5 | 38.2 | 2.00e-09 | 37.3% | 92.9% |
| PF13857.13 | Ank_5 | 37.1 | 4.40e-09 | 35.3% | 85.7% |
| PF13637.13 | Ank_4 | 30.5 | 4.70e-07 | 27.3% | 62.0% |
| PF00023.37 | Ank | 28.6 | 1.60e-06 | 23.3% | 100.0% |
| PF00023.37 | Ank | 30.2 | 5.20e-07 | 22.7% | 93.9% |
| PF13606.13 | Ank_3 | 18.1 | 3.90e-03 | 21.3% | 96.8% |
| PF13606.13 | Ank_3 | 21.2 | 3.80e-04 | 20.7% | 96.8% |
D2
medium
residues 225-321
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ko5A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 50.0 | 3.60e-01 | 92.8% | 48.3% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 40.0 | 3.91e-01 | 83.5% | 70.1% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 40.0 | 3.06e-01 | 80.4% | 35.2% |
| 5bn3A04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.53 | 45.0 | 4.05e-01 | 94.8% | 74.1% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.53 | 42.0 | 3.82e-01 | 85.6% | 72.3% |
| 4gdxA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.52 | 40.0 | 3.88e-01 | 95.9% | 73.0% |
| 3jq1B01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 47.0 | 3.28e-01 | 100.0% | 47.9% |
| 2o8bB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 36.0 | 3.30e-01 | 74.2% | 70.2% |
| 4f7aA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 45.0 | 2.88e-01 | 100.0% | 97.0% |
| 3nqoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 2.79e-01 | 70.1% | 85.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028765 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.64 | 44.0 | 3.84e-01 | 92.8% | 46.0% |
| 4030358 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.63 | 29.0 | 2.12e-01 | 89.7% | 15.2% |
| 3236426 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.61 | 51.0 | 3.51e-01 | 91.8% | 40.9% |
| 3789167 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.60 | 45.0 | 3.41e-01 | 79.4% | 85.5% |
| 3824122 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.60 | 46.0 | 3.12e-01 | 81.4% | 60.6% |
| 3194375 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 47.0 | 3.00e-01 | 84.5% | 90.5% |
| 3238734 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.59 | 50.0 | 3.35e-01 | 92.8% | 38.4% |
| 3408766 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 44.0 | 3.01e-01 | 78.4% | 82.6% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.58 | 48.0 | 3.42e-01 | 90.7% | 66.2% |
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.58 | 48.0 | 3.71e-01 | 90.7% | 84.0% |
| 4550535 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.58 | 44.0 | 4.12e-01 | 80.4% | 78.3% |
| None | — | 0.57 | 44.0 | 2.66e-01 | 83.5% | 51.1% | |
| 5015087 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 45.0 | 3.34e-01 | 100.0% | 33.9% |
| 3499265 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.56 | 41.0 | 2.84e-01 | 77.3% | 24.8% |
| 3588528 | 604.36.1.1 ↗ | alpha bundles › Spectrin repeat-like › Mid-cell-anchored protein Z (MapZ) extracellular domain 1 › Mid-cell-anchored protein Z (MapZ) extracellular domain 1 › MapZ_EC1 | 0.56 | 50.0 | 4.47e-01 | 99.0% | 76.3% |
| 3518023 | 604.36.1.1 ↗ | alpha bundles › Spectrin repeat-like › Mid-cell-anchored protein Z (MapZ) extracellular domain 1 › Mid-cell-anchored protein Z (MapZ) extracellular domain 1 › MapZ_EC1 | 0.56 | 50.0 | 4.46e-01 | 99.0% | 71.9% |
| 4991231 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 45.0 | 2.94e-01 | 90.7% | 72.7% |
| 4928786 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.55 | 39.0 | 3.00e-01 | 73.2% | 71.6% |
| 4612374 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.55 | 41.0 | 4.29e-01 | 81.4% | 100.0% |
| 3988933 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.54 | 46.0 | 3.13e-01 | 99.0% | 45.7% |
| 3778928 | 5050.1.1.22 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like | 0.54 | 39.0 | 2.47e-01 | 75.3% | 30.7% |
| None | — | 0.53 | 42.0 | 2.46e-01 | 86.6% | 38.8% | |
| 3515402 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.53 | 40.0 | 2.93e-01 | 80.4% | 75.7% |
| 4989412 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 42.0 | 3.13e-01 | 83.5% | 73.3% |
| 3734132 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.53 | 40.0 | 2.90e-01 | 82.5% | 37.5% |
| 3355773 | 109.4.1.47 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | 0.53 | 45.0 | 2.62e-01 | 99.0% | 86.3% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.53 | 42.0 | 3.84e-01 | 86.6% | 100.0% |
| 4946403 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.53 | 40.0 | 3.05e-01 | 81.4% | 84.2% |
| 3386015 | 5086.1.1.223 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF28155 | 0.52 | 35.0 | 3.90e-01 | 92.8% | 89.3% |
| 3937938 | 109.4.1.47 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | 0.51 | 44.0 | 2.56e-01 | 100.0% | 17.0% |
| 5019573 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.50 | 41.0 | 3.17e-01 | 90.7% | 86.1% |