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KX522565.1__AOA49531.1__gwv_1108__00040

Bact-Vir

KX522565.1__AOA49531.1__gwv_1108__00040

Identity

Accession:
KX522565 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Wolbachia_phage_WO

TaxID: 112596

Cluster

View cluster (81 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.77 70.0 5.44e-01 100.0% 48.6%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.73 65.0 5.14e-01 97.6% 51.2%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 64.0 5.05e-01 100.0% 72.7%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.71 62.0 6.37e-01 97.6% 100.0%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.70 59.0 5.38e-01 100.0% 69.4%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.66 34.0 2.73e-01 89.3% 26.3%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 57.0 5.08e-01 100.0% 69.2%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.64 53.0 4.95e-01 92.9% 73.3%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 52.0 4.84e-01 100.0% 71.6%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 55.0 4.81e-01 100.0% 78.7%
2wcrB00 3.10.129.140 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein 0.61 45.0 3.80e-01 78.6% 65.8%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.61 51.0 4.56e-01 94.0% 64.8%
5wl1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.23e-01 89.3% 64.4%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 44.0 4.25e-01 96.4% 68.8%
1sq2N00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 4.02e-01 84.5% 60.7%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 43.0 4.14e-01 90.5% 69.7%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 42.0 3.84e-01 90.5% 59.6%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 41.0 3.66e-01 91.7% 54.1%
2qtlA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 41.0 3.87e-01 91.7% 62.6%
1ddgA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 42.0 3.84e-01 96.4% 60.5%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 27.0 2.95e-01 98.8% 55.9%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.54 44.0 4.07e-01 86.9% 81.0%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 45.0 4.13e-01 94.0% 69.6%
1jz7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.94e-01 89.3% 64.3%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 44.0 3.93e-01 92.9% 67.2%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 33.0 3.21e-01 72.6% 53.7%
6v6aC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 4.35e-01 98.8% 85.7%
3bvxA05 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 4.34e-01 94.0% 96.9%
2cxhA01 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.53 41.0 3.23e-01 100.0% 40.2%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.76e-01 92.9% 67.0%
1z6bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 47.0 3.96e-01 100.0% 71.1%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 4.11e-01 98.8% 80.9%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.51 41.0 3.35e-01 92.9% 79.9%
5tz6B02 3.10.129.120 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.50 45.0 3.68e-01 100.0% 64.3%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 44.0 3.80e-01 100.0% 65.2%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 44.0 3.88e-01 100.0% 72.8%
3if8B03 6.20.270.10 Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › 0.50 32.0 3.71e-01 100.0% 90.0%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943172 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.92 86.0 8.06e-01 98.8% 91.0%
3977382 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.89 83.0 7.97e-01 100.0% 100.0%
3982237 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.86 69.0 6.90e-01 83.3% 84.7%
5041372 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 76.0 7.45e-01 100.0% 96.7%
5002659 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 66.0 6.79e-01 95.2% 97.5%
4141852 1.1.13.56 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.75 69.0 6.95e-01 100.0% 98.8%
4033712 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 67.0 6.68e-01 95.2% 100.0%
3588729 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 66.0 6.33e-01 95.2% 100.0%
4514734 1.1.13.42 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube 0.73 65.0 5.95e-01 100.0% 93.6%
169881 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 64.0 4.84e-01 100.0% 63.1%
4441129 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.70 59.0 5.23e-01 92.9% 64.2%
77 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.70 59.0 5.40e-01 100.0% 70.0%
160389 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 57.0 5.05e-01 100.0% 65.9%
2137681 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.65 55.0 5.06e-01 100.0% 71.6%
3966494 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.65 54.0 5.01e-01 100.0% 70.9%
3569205 11.1.1.419 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3694 0.65 51.0 3.88e-01 85.7% 47.0%
5051220 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 47.0 4.59e-01 94.0% 72.2%
4629425 11.1.1.1369 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1410 0.62 46.0 4.49e-01 89.3% 70.5%
4998047 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 48.0 4.06e-01 84.5% 52.5%
3260242 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 4.42e-01 83.3% 70.5%
3555079 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.60 47.0 3.98e-01 85.7% 53.1%
4510320 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.59 40.0 4.00e-01 83.3% 65.6%
4956917 11.1.1.15 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.59 47.0 4.36e-01 85.7% 68.6%
3525428 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.59 45.0 3.88e-01 89.3% 52.3%
4104901 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.55 45.0 3.78e-01 91.7% 51.7%
4020238 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.55 48.0 4.03e-01 100.0% 64.0%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.55 39.0 3.57e-01 94.0% 56.4%
3254529 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.55 43.0 3.55e-01 91.7% 46.5%
3928764 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.54 50.0 4.61e-01 100.0% 92.4%
4002521 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 45.0 3.89e-01 100.0% 58.5%
3350507 11.1.1.394 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF568 0.54 49.0 3.92e-01 100.0% 65.6%
3665101 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 42.0 4.28e-01 84.5% 100.0%
3460166 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.24e-01 98.8% 100.0%
3972759 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 40.0 3.69e-01 92.9% 62.7%
3929117 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.52 39.0 3.63e-01 97.6% 61.8%
3637781 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 45.0 3.11e-01 100.0% 56.2%
4091836 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.52 45.0 3.88e-01 100.0% 61.5%
4970458 222.1.1.8 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.52 36.0 3.20e-01 75.0% 79.9%
3386616 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.94e-01 97.6% 66.7%
4181819 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.52 45.0 3.75e-01 100.0% 54.2%
3761689 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 42.0 3.53e-01 92.9% 51.7%
3618300 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 45.0 3.95e-01 100.0% 65.4%
3548451 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.51 44.0 3.69e-01 100.0% 54.7%
3500426 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.51 45.0 2.98e-01 100.0% 47.8%
3739461 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.51 42.0 2.81e-01 98.8% 20.8%
3613252 1.1.7.99 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1, FAD_binding_6 0.51 44.0 3.85e-01 100.0% 65.2%
3741415 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 44.0 3.53e-01 100.0% 57.1%
3699810 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 44.0 3.95e-01 100.0% 69.2%
5055627 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 38.0 3.62e-01 85.7% 69.0%
D2 high residues 92-169
PDB
Domain cluster: rep: NC_049344.1__YP_009965327.1__HYO69_gp49__00049__D120-179
D3 high residues 183-199_258-312
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.88 82.0 7.39e-01 100.0% 91.6%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.86 80.0 5.85e-01 100.0% 47.7%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.85 79.0 5.79e-01 100.0% 45.1%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.83 75.0 5.66e-01 100.0% 46.4%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.81 75.0 5.44e-01 100.0% 41.8%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.73 66.0 5.17e-01 100.0% 81.2%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.73 65.0 5.16e-01 100.0% 80.3%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.72 65.0 5.52e-01 100.0% 65.0%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.71 60.0 5.95e-01 100.0% 88.0%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 61.0 4.65e-01 100.0% 70.9%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.67 61.0 5.03e-01 100.0% 64.8%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.67 52.0 4.38e-01 84.7% 91.9%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.67 59.0 5.23e-01 100.0% 74.3%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.66 58.0 5.35e-01 98.6% 79.6%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.66 58.0 4.27e-01 100.0% 36.7%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.66 51.0 4.30e-01 84.7% 91.9%
3girA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.65 45.0 4.39e-01 79.2% 66.7%
5heeA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.64 48.0 3.27e-01 80.6% 99.6%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 43.0 3.99e-01 76.4% 56.0%
3wraA01 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.63 47.0 3.11e-01 80.6% 90.4%
1dj0A01 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.62 44.0 3.62e-01 76.4% 61.6%
3cnrB00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 53.0 4.97e-01 100.0% 80.6%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 42.0 4.08e-01 79.2% 65.8%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 4.00e-01 81.9% 82.6%
1dlcA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.59 42.0 3.11e-01 76.4% 99.0%
4lrzE02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 47.0 4.38e-01 88.9% 89.4%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 48.0 4.63e-01 90.3% 79.3%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.59 42.0 3.41e-01 76.4% 60.4%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 48.0 4.66e-01 98.6% 81.5%
4rm7A02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.58 49.0 4.41e-01 100.0% 82.6%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.58 50.0 4.54e-01 100.0% 77.0%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.47e-01 97.2% 31.7%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.58 39.0 3.22e-01 80.6% 39.7%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 3.72e-01 90.3% 79.1%
2q7aA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 47.0 3.80e-01 94.4% 64.5%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 42.0 4.23e-01 91.7% 77.0%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.09e-01 90.3% 66.7%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 3.72e-01 76.4% 68.7%
5i4nA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 3.75e-01 75.0% 100.0%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 4.27e-01 90.3% 72.8%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 47.0 3.59e-01 93.1% 39.4%
3tmaA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 45.0 3.37e-01 97.2% 34.5%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 3.89e-01 94.4% 59.7%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.18e-01 90.3% 71.1%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 45.0 4.10e-01 87.5% 66.3%
4m8rA01 2.60.40.3920 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 4.12e-01 91.7% 68.9%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 48.0 4.39e-01 94.4% 74.5%
2cryA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.08e-01 91.7% 65.7%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 4.12e-01 86.1% 74.4%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 46.0 4.19e-01 93.1% 76.3%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.75e-01 90.3% 59.0%
3bpsA02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.55 40.0 3.26e-01 91.7% 38.7%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 40.0 3.26e-01 79.2% 77.0%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 3.22e-01 81.9% 76.6%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.95e-01 94.4% 79.3%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.00e-01 90.3% 68.4%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.43e-01 91.7% 90.4%
4lubB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 42.0 3.81e-01 86.1% 64.0%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 39.0 3.11e-01 77.8% 77.4%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 41.0 3.77e-01 88.9% 61.9%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 4.03e-01 90.3% 70.7%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 44.0 4.15e-01 94.4% 83.7%
2ktyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 44.0 3.66e-01 94.4% 67.2%
1j0hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.67e-01 93.1% 58.4%
4dlqA03 2.60.220.50 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › 0.53 46.0 3.37e-01 97.2% 94.9%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 43.0 2.91e-01 94.4% 23.9%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 38.0 2.74e-01 76.4% 64.3%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.72e-01 83.3% 93.5%
3mdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.79e-01 94.4% 64.5%
2rsvA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 43.0 2.72e-01 94.4% 22.1%
6phxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 43.0 3.97e-01 93.1% 91.6%
5qinA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 42.0 4.05e-01 94.4% 84.7%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973341 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.98 93.0 8.66e-01 100.0% 83.5%
5002753 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.97 93.0 8.65e-01 100.0% 94.1%
3981227 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.95 90.0 8.90e-01 98.6% 94.7%
4889790 3071.1.1.7 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.90 83.0 6.18e-01 98.6% 92.8%
4995816 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.90 85.0 7.63e-01 100.0% 92.6%
5002662 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.89 83.0 7.32e-01 100.0% 81.0%
2475125 3071.1.1.7 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.88 80.0 6.07e-01 98.6% 90.5%
3970830 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.85 79.0 6.99e-01 100.0% 86.0%
4501945 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.85 78.0 6.70e-01 100.0% 87.3%
4542268 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.85 77.0 6.65e-01 100.0% 87.3%
4647050 1.1.13.56 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.84 78.0 7.49e-01 100.0% 91.3%
5041375 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 78.0 7.20e-01 100.0% 80.0%
4033372 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 77.0 6.54e-01 100.0% 77.3%
3945543 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 77.0 7.21e-01 100.0% 89.4%
4031753 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 76.0 6.84e-01 100.0% 80.0%
4883825 1.1.13.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.77 72.0 6.55e-01 100.0% 90.2%
3974369 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 69.0 6.55e-01 100.0% 89.4%
4031285 1.1.13.64 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.76 69.0 6.43e-01 100.0% 93.3%
4988103 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 68.0 6.19e-01 100.0% 90.5%
184486 1.1.13.26 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.74 67.0 6.45e-01 100.0% 90.1%
5067380 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 65.0 5.21e-01 100.0% 78.6%
192 1.1.9.13 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF2584 0.71 60.0 5.83e-01 100.0% 83.5%
3193183 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.71 63.0 5.27e-01 97.2% 65.0%
4024673 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.71 51.0 4.43e-01 76.4% 99.1%
5026244 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 56.0 5.24e-01 98.6% 71.1%
4608778 1.1.7.107 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.69 62.0 5.23e-01 100.0% 60.8%
3720023 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 63.0 5.60e-01 100.0% 72.0%
4954540 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 62.0 5.38e-01 100.0% 92.7%
4682340 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.68 49.0 4.15e-01 77.8% 95.2%
4956728 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.68 49.0 4.09e-01 77.8% 94.6%
4638008 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.68 50.0 4.23e-01 79.2% 95.8%
4943219 205.1.1.123 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD 0.67 57.0 4.44e-01 93.1% 76.8%
1320672 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.67 61.0 4.09e-01 100.0% 30.8%
2877144 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.67 61.0 3.99e-01 100.0% 27.5%
4030042 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.67 49.0 3.99e-01 77.8% 94.0%
3728982 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.67 49.0 4.03e-01 77.8% 93.1%
5049368 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.67 56.0 4.43e-01 93.1% 78.7%
3838081 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 58.0 5.37e-01 100.0% 78.9%
5051220 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 53.0 4.95e-01 97.2% 73.3%
3468691 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 53.0 4.96e-01 90.3% 73.0%
4391792 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 57.0 5.17e-01 100.0% 74.7%
3261290 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.63 53.0 4.39e-01 91.7% 59.2%
3261996 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.18e-01 90.3% 50.4%
5064178 1.1.13.73 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA 0.62 47.0 5.08e-01 81.9% 98.3%
4158236 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.61 50.0 3.46e-01 93.1% 51.9%
4475204 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.61 50.0 3.47e-01 93.1% 56.5%
4219826 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.47e-01 93.1% 57.3%
3962051 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 45.0 3.31e-01 81.9% 42.9%
4266150 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.44e-01 93.1% 54.9%
4569317 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 48.0 3.43e-01 93.1% 54.2%
4163845 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.45e-01 93.1% 56.4%
4193142 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.40e-01 93.1% 52.7%
4067859 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 48.0 3.45e-01 93.1% 56.7%
5078833 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.44e-01 93.1% 48.4%
4350586 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 49.0 3.35e-01 93.1% 52.0%
4369841 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.60 48.0 3.45e-01 93.1% 57.6%
4337358 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.39e-01 93.1% 53.9%
5082266 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 49.0 3.44e-01 93.1% 48.2%
4205662 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.38e-01 93.1% 53.5%
4672169 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.43e-01 93.1% 56.3%
4033343 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.36e-01 93.1% 80.4%
4985721 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.35e-01 93.1% 44.8%
4304256 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.44e-01 93.1% 57.0%
4385879 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.38e-01 93.1% 54.5%
3350908 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 49.0 3.38e-01 94.4% 53.0%
4201836 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.59 48.0 3.40e-01 93.1% 56.4%
4604606 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.58 47.0 3.35e-01 93.1% 54.5%
None — 0.58 48.0 3.43e-01 94.4% 57.4%
4588330 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.58 47.0 3.32e-01 93.1% 54.6%
5027110 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.58 48.0 3.33e-01 93.1% 45.7%
4936296 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.58 48.0 3.31e-01 93.1% 46.0%
4138570 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.58 47.0 3.37e-01 93.1% 57.1%
4550789 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 48.0 3.39e-01 94.4% 57.1%
4451796 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 47.0 3.36e-01 94.4% 57.0%
4643984 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 48.0 3.50e-01 94.4% 61.7%
4246888 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 48.0 3.36e-01 94.4% 47.2%
5052292 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 47.0 3.22e-01 93.1% 46.2%
5034259 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 46.0 3.27e-01 93.1% 47.2%
4162000 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 48.0 3.31e-01 94.4% 45.4%
5080582 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 46.0 3.21e-01 93.1% 53.1%
4305191 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.22e-01 93.1% 45.3%
4948136 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.27e-01 93.1% 48.2%
4997642 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 45.0 3.17e-01 93.1% 44.1%
4983236 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 47.0 3.22e-01 94.4% 44.8%
5043875 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.22e-01 94.4% 48.1%
5067082 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.21e-01 94.4% 45.3%
4190012 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.55 41.0 2.99e-01 81.9% 54.2%
5025163 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.55 44.0 3.18e-01 93.1% 48.8%
3915850 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.55 44.0 2.72e-01 91.7% 14.1%
3776866 12.5.1.15 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N 0.53 45.0 3.94e-01 94.4% 81.8%
3916538 12.5.1.15 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N 0.53 44.0 3.42e-01 93.1% 84.8%
3887475 12.5.1.15 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N 0.52 43.0 3.37e-01 94.4% 92.9%
3792511 206.1.1.72 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.52 43.0 2.80e-01 94.4% 25.1%
3243274 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 43.0 2.83e-01 94.4% 25.5%
D4 high residues 206-255
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bqbA01 3.10.170.10 Alpha Beta › Roll › Elastase; domain 1 › 0.67 52.0 3.78e-01 88.0% 94.8%
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.66 36.0 3.56e-01 98.0% 45.3%
3d37A03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.65 56.0 5.35e-01 100.0% 83.3%
6kykA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 43.0 3.67e-01 98.0% 41.7%
1k28D04 3.30.1920.40 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › 0.64 53.0 4.92e-01 100.0% 75.0%
2ogjA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.61 46.0 3.71e-01 90.0% 90.4%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.60 41.0 3.29e-01 72.0% 77.2%
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.60 30.0 3.46e-01 84.0% 52.8%
1kvkA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.59 51.0 3.35e-01 100.0% 42.2%
2fazA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 40.0 3.52e-01 88.0% 46.8%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.58 41.0 3.33e-01 100.0% 41.1%
3hwuA00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.57 40.0 2.98e-01 76.0% 46.5%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.57 48.0 3.28e-01 96.0% 31.7%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 45.0 3.85e-01 96.0% 55.7%
1x1mA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 44.0 3.48e-01 98.0% 42.1%
3lp5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 2.95e-01 96.0% 85.6%
1c44A00 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.54 44.0 3.44e-01 98.0% 63.4%
3fbxA00 3.60.60.30 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › 0.52 41.0 2.46e-01 100.0% 55.0%
2dulA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.41e-01 84.0% 98.7%
2dafA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 34.0 3.07e-01 70.0% 97.4%
2wdqA04 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.51 33.0 3.51e-01 100.0% 80.5%
3i57A01 3.10.20.470 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 37.0 3.34e-01 80.0% 98.7%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973343 3071.1.1.0 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.91 85.0 7.63e-01 100.0% 86.2%
3948103 3071.1.1.0 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.90 81.0 7.79e-01 100.0% 87.3%
5002661 3071.1.1.0 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.84 75.0 6.87e-01 100.0% 90.8%
3980575 3071.1.1.0 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.82 74.0 6.57e-01 100.0% 87.1%
3268295 221.1.1.56 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_f0 0.67 46.0 3.85e-01 92.0% 41.1%
3843692 221.1.1.52 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.66 43.0 3.81e-01 92.0% 45.3%
223697 3071.1.1.5 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Gp44-like_3rd 0.65 56.0 5.38e-01 100.0% 84.7%
5079246 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 47.0 3.80e-01 88.0% 41.1%
3464487 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.64 41.0 3.65e-01 92.0% 44.0%
5000257 2002.1.1.152 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 0.61 47.0 2.75e-01 88.0% 99.2%
3889364 221.1.1.164 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF29299 0.61 41.0 3.51e-01 88.0% 43.8%
5046867 212.1.1.3 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N 0.60 55.0 3.69e-01 100.0% 68.6%
4938612 4076.2.1.0 ↗ a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like 0.60 41.0 4.15e-01 96.0% 72.0%
5032747 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.59 38.0 2.90e-01 98.0% 29.6%
3882461 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 39.0 3.43e-01 70.0% 94.7%
3475330 221.1.1.19 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX 0.58 44.0 3.75e-01 98.0% 51.2%
3591075 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 42.0 3.57e-01 88.0% 45.9%
4530224 4987.1.1.1 ↗ few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 0.57 35.0 3.69e-01 72.0% 68.9%
3481116 4111.1.1.0 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like 0.57 40.0 2.63e-01 74.0% 49.0%
3704397 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 41.0 3.46e-01 88.0% 45.9%
3518216 221.1.1.44 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.56 40.0 3.56e-01 84.0% 50.7%
3707940 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 41.0 3.33e-01 92.0% 40.0%
2662362 2011.2.1.0 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like 0.55 45.0 3.17e-01 100.0% 97.0%
3284652 268.1.1.2 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › MDMPI_C 0.54 44.0 3.85e-01 96.0% 61.4%
3941026 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.54 37.0 2.52e-01 72.0% 39.5%
3260081 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.53 43.0 3.08e-01 100.0% 37.8%
3405879 221.17.1.1 ↗ a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › Wheel 0.53 39.0 2.89e-01 86.0% 49.7%
4017081 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 45.0 2.86e-01 96.0% 47.8%
3801584 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 38.0 3.11e-01 90.0% 40.0%
3282813 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.52 35.0 3.21e-01 76.0% 98.8%
4946549 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.51 42.0 3.72e-01 98.0% 98.8%
3397596 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 42.0 3.20e-01 94.0% 39.2%