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KX522565.1__AOA49534.1__gwv_1102__00034
Bact-VirKX522565.1__AOA49534.1__gwv_1102__00034
Identity
- Accession:
- KX522565 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-68
Domain cluster:
rep: ON464759.1__UTV60862.1__JDFnp1_74__00074__D5-72
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12844.14 best | HTH_19 | 36.7 | 4.40e-09 | 92.2% | 84.4% |
| PF13443.13 | HTH_26 | 23.2 | 9.00e-05 | 89.1% | 76.2% |
| PF01381.29 | HTH_3 | 52.9 | 4.10e-14 | 85.9% | 94.5% |
D2
medium
residues 77-147_222-302
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wivA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 4.38e-01 | 86.2% | 90.6% |
| 3o7pA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.68 | 51.0 | 4.51e-01 | 78.3% | 74.3% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.64 | 52.0 | 3.97e-01 | 84.2% | 82.3% |
| 8ipqB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.63 | 47.0 | 3.79e-01 | 77.0% | 89.0% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.61 | 51.0 | 3.81e-01 | 90.1% | 89.3% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 27.0 | 3.41e-01 | 78.3% | 68.5% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 40.0 | 4.68e-01 | 72.4% | 100.0% |
| 3ee4A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.59 | 51.0 | 4.13e-01 | 94.1% | 59.9% |
| 6e1kA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 36.0 | 4.16e-01 | 82.2% | 83.9% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.58 | 24.0 | 3.12e-01 | 73.7% | 65.6% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 40.0 | 4.03e-01 | 71.1% | 96.8% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.56 | 39.0 | 4.52e-01 | 73.7% | 100.0% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.56 | 39.0 | 4.42e-01 | 72.4% | 99.1% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 39.0 | 4.44e-01 | 75.0% | 100.0% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 41.0 | 3.19e-01 | 78.3% | 99.1% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 33.0 | 3.99e-01 | 81.6% | 95.9% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.54 | 38.0 | 4.34e-01 | 73.0% | 100.0% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 38.0 | 4.00e-01 | 82.9% | 77.6% |
| 4q4hA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.53 | 45.0 | 3.49e-01 | 90.1% | 49.4% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 37.0 | 4.26e-01 | 72.4% | 100.0% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 32.0 | 3.93e-01 | 78.3% | 97.9% |
| 1s2xA00 | 1.20.190.30 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ | 0.53 | 41.0 | 3.92e-01 | 81.6% | 88.9% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 38.0 | 4.31e-01 | 83.6% | 100.0% |
| 7zdtD01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.52 | 38.0 | 3.00e-01 | 75.0% | 99.7% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 27.0 | 3.58e-01 | 74.3% | 94.0% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.51 | 37.0 | 3.18e-01 | 75.0% | 81.8% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 34.0 | 3.84e-01 | 80.3% | 89.0% |
| 2ddhA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 28.0 | 3.04e-01 | 82.9% | 62.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5015095 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.76 | 53.0 | 4.86e-01 | 71.1% | 84.2% |
| 3593035 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.76 | 55.0 | 4.60e-01 | 75.0% | 70.4% |
| 3743580 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.75 | 54.0 | 4.53e-01 | 73.7% | 75.2% |
| 4978085 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.74 | 54.0 | 4.88e-01 | 73.7% | 83.1% |
| 5076969 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.74 | 53.0 | 4.81e-01 | 73.0% | 82.6% |
| 4124062 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.74 | 54.0 | 4.77e-01 | 75.7% | 76.3% |
| 3965160 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.74 | 54.0 | 4.77e-01 | 75.7% | 76.3% |
| 4193980 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.73 | 56.0 | 5.90e-01 | 86.8% | 88.9% |
| 4124764 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.71 | 57.0 | 4.37e-01 | 83.6% | 84.9% |
| 4031946 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.71 | 41.0 | 5.10e-01 | 83.6% | 89.0% |
| 3216672 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.71 | 49.0 | 4.53e-01 | 71.1% | 77.4% |
| 3490246 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.70 | 50.0 | 4.52e-01 | 73.0% | 84.0% |
| 3970773 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.68 | 49.0 | 4.36e-01 | 73.0% | 76.0% |
| 3456475 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.66 | 52.0 | 4.11e-01 | 82.9% | 87.7% |
| 3291362 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.66 | 52.0 | 3.98e-01 | 84.2% | 79.4% |
| 4973923 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.65 | 51.0 | 3.99e-01 | 82.9% | 87.3% |
| 3287952 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.65 | 45.0 | 4.87e-01 | 84.2% | 85.6% |
| 3596751 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.64 | 51.0 | 3.91e-01 | 84.2% | 81.4% |
| 4004375 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.63 | 51.0 | 4.01e-01 | 84.9% | 86.5% |
| 4565043 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.63 | 35.0 | 4.41e-01 | 71.1% | 91.1% |
| 3578718 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.63 | 32.0 | 3.96e-01 | 74.3% | 77.9% |
| 4015065 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.62 | 49.0 | 3.80e-01 | 82.9% | 82.7% |
| 4547729 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.62 | 48.0 | 3.81e-01 | 80.9% | 87.2% |
| 3724523 | 4121.1.1.7 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF26616 | 0.61 | 44.0 | 3.38e-01 | 74.3% | 61.1% |
| 5047547 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.61 | 43.0 | 4.90e-01 | 82.2% | 97.4% |
| 4470940 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.60 | 48.0 | 3.68e-01 | 84.9% | 80.6% |
| 4969271 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.58 | 48.0 | 4.15e-01 | 86.8% | 92.6% |
| 3422920 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.57 | 47.0 | 4.09e-01 | 87.5% | 65.5% |
| 3425364 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.56 | 48.0 | 3.68e-01 | 90.1% | 47.8% |
| 3589723 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 39.0 | 4.23e-01 | 80.3% | 87.2% |
| 5077973 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.55 | 45.0 | 3.66e-01 | 89.5% | 90.3% |
| 3246117 | 1075.4.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 | 0.55 | 45.0 | 3.43e-01 | 88.2% | 78.9% |
| 3700567 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.55 | 47.0 | 3.61e-01 | 92.1% | 47.6% |
| 4024271 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.55 | 40.0 | 4.30e-01 | 77.6% | 86.7% |
| 4780326 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.54 | 39.0 | 3.59e-01 | 72.4% | 96.4% |
| 4963973 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.54 | 42.0 | 4.13e-01 | 88.8% | 74.1% |
| 5063261 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.54 | 45.0 | 3.51e-01 | 88.8% | 50.5% |
| 4027147 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.53 | 39.0 | 4.24e-01 | 80.9% | 89.2% |
| 4026288 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.53 | 47.0 | 4.18e-01 | 96.1% | 86.3% |
| 3584613 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.51 | 43.0 | 3.44e-01 | 90.1% | 52.3% |
| 3208369 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.51 | 41.0 | 3.83e-01 | 84.2% | 84.3% |
| 3205696 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.51 | 41.0 | 4.33e-01 | 87.5% | 96.3% |
| 3570028 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.50 | 35.0 | 3.32e-01 | 70.4% | 78.9% |
D3
medium
residues 148-221
Domain cluster:
rep: ON464759.1__UTV60862.1__JDFnp1_74__00074__D5-72
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13560.13 best | HTH_31 | 34.0 | 4.30e-08 | 81.1% | 81.2% |
| PF12844.14 | HTH_19 | 31.5 | 1.80e-07 | 79.7% | 79.7% |
| PF13443.13 | HTH_26 | 34.9 | 2.00e-08 | 78.4% | 81.0% |
| PF01381.29 | HTH_3 | 55.2 | 7.90e-15 | 74.3% | 98.2% |