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KX557279.1__AON97341.1__SEA_HEDWIG_48__00048
Bact-VirKX557279.1__AON97341.1__SEA_HEDWIG_48__00048
Identity
- Accession:
- KX557279 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
TaxID: 1887648
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-119
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d2fA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.83 | 49.0 | 4.72e-01 | 100.0% | 52.7% |
| 4gniA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.78 | 46.0 | 4.57e-01 | 100.0% | 56.3% |
| 1atrA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.77 | 46.0 | 4.51e-01 | 100.0% | 55.1% |
| 4a2bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.77 | 58.0 | 4.81e-01 | 100.0% | 47.1% |
| 3shsA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.74 | 51.0 | 4.40e-01 | 70.7% | 66.7% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.74 | 52.0 | 4.41e-01 | 100.0% | 45.5% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 42.0 | 3.55e-01 | 79.3% | 37.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 38.0 | 3.66e-01 | 72.0% | 44.2% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.72 | 55.0 | 3.99e-01 | 100.0% | 30.0% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.71 | 41.0 | 3.15e-01 | 100.0% | 25.7% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.70 | 63.0 | 4.76e-01 | 100.0% | 61.3% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.70 | 56.0 | 3.95e-01 | 100.0% | 29.7% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.67 | 61.0 | 4.60e-01 | 100.0% | 64.6% |
| 1b78A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.67 | 60.0 | 4.63e-01 | 100.0% | 64.7% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 39.0 | 3.35e-01 | 70.7% | 37.6% |
| 4hkqA04 | 3.10.20.370 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 49.0 | 5.09e-01 | 100.0% | 85.5% |
| 4n6qA00 | 2.60.40.3960 | Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain | 0.65 | 50.0 | 3.89e-01 | 81.7% | 57.3% |
| 1a66A00 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.64 | 44.0 | 3.41e-01 | 70.7% | 66.3% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 43.0 | 3.46e-01 | 90.2% | 38.3% |
| 3uh8A00 | 2.60.40.3350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 43.0 | 3.86e-01 | 73.2% | 61.0% |
| 5dstA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.62 | 53.0 | 4.15e-01 | 96.3% | 100.0% |
| 1t6cA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 48.0 | 4.17e-01 | 100.0% | 55.2% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.61 | 44.0 | 3.50e-01 | 96.3% | 37.8% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 43.0 | 3.54e-01 | 81.7% | 42.6% |
| 3gveA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.60 | 43.0 | 2.87e-01 | 75.6% | 94.0% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.60 | 41.0 | 3.23e-01 | 100.0% | 33.3% |
| 3v6oB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 41.0 | 3.89e-01 | 73.2% | 76.0% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 3.95e-01 | 70.7% | 71.6% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 41.0 | 3.46e-01 | 74.4% | 77.4% |
| 1bquA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.01e-01 | 76.8% | 69.0% |
| 3hi0A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 46.0 | 4.13e-01 | 100.0% | 59.8% |
| 1d5rA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 51.0 | 4.39e-01 | 100.0% | 74.4% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.58 | 50.0 | 3.82e-01 | 100.0% | 100.0% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 41.0 | 3.50e-01 | 75.6% | 71.7% |
| 2qrdA00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.58 | 36.0 | 3.23e-01 | 70.7% | 45.6% |
| 3hn3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.84e-01 | 75.6% | 71.2% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.57 | 48.0 | 3.48e-01 | 96.3% | 92.6% |
| 1uv4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 48.0 | 3.28e-01 | 92.7% | 29.2% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.70e-01 | 70.7% | 63.9% |
| 1bf5A02 | 2.60.40.630 | Mainly Beta › Sandwich › Immunoglobulin-like › STAT transcription factor, DNA-binding domain | 0.56 | 40.0 | 3.36e-01 | 75.6% | 72.7% |
| 2erjB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.54e-01 | 70.7% | 70.2% |
| 1gpcA00 | 3.90.198.10 | Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein | 0.54 | 39.0 | 2.91e-01 | 75.6% | 74.8% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 44.0 | 3.83e-01 | 100.0% | 56.4% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.53 | 45.0 | 3.97e-01 | 100.0% | 63.2% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 45.0 | 3.74e-01 | 100.0% | 85.3% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.51 | 46.0 | 3.72e-01 | 98.8% | 77.3% |
| 1pbyB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.73e-01 | 98.8% | 21.4% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.51 | 46.0 | 3.70e-01 | 100.0% | 73.5% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4109123 | 2484.1.1.27 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA | 0.82 | 63.0 | 4.51e-01 | 100.0% | 31.0% |
| 3203065 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.77 | 43.0 | 3.58e-01 | 79.3% | 34.1% |
| 3970675 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 56.0 | 4.27e-01 | 96.3% | 36.7% |
| 1824495 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.72 | 53.0 | 4.09e-01 | 96.3% | 35.4% |
| 3226172 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 49.0 | 4.54e-01 | 74.4% | 66.7% |
| 5058833 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 46.0 | 4.16e-01 | 70.7% | 71.3% |
| 3719912 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.67 | 60.0 | 4.89e-01 | 100.0% | 75.3% |
| 3338609 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.64 | 55.0 | 4.32e-01 | 100.0% | 44.6% |
| 3843423 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.64 | 47.0 | 4.12e-01 | 100.0% | 50.8% |
| 4959362 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 43.0 | 3.99e-01 | 74.4% | 66.7% |
| 4451157 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.61 | 49.0 | 3.51e-01 | 100.0% | 30.9% |
| 3712315 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 54.0 | 4.28e-01 | 100.0% | 55.8% |
| 3840448 | 11.2.1.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SYDE | 0.60 | 51.0 | 4.42e-01 | 97.6% | 64.4% |
| 3719202 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 52.0 | 3.52e-01 | 100.0% | 29.9% |
| 3625217 | 223.2.1.37 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like | 0.59 | 47.0 | 3.61e-01 | 87.8% | 47.0% |
| 3856382 | 11.1.5.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CP2 | 0.59 | 51.0 | 3.72e-01 | 97.6% | 72.5% |
| 4956579 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 50.0 | 4.05e-01 | 97.6% | 54.5% |
| 3828031 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 50.0 | 3.97e-01 | 96.3% | 65.9% |
| 3240178 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 49.0 | 4.20e-01 | 97.6% | 74.3% |
| 3901490 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 51.0 | 4.41e-01 | 100.0% | 63.8% |
| 3654212 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 52.0 | 4.20e-01 | 100.0% | 76.8% |
| 3502389 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 51.0 | 4.17e-01 | 100.0% | 57.4% |
| 3784091 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 50.0 | 4.31e-01 | 100.0% | 67.4% |
| 3909458 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.03e-01 | 79.3% | 76.0% |
| 3728840 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 49.0 | 4.12e-01 | 96.3% | 59.3% |
| 3702304 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 48.0 | 4.08e-01 | 96.3% | 66.9% |
| 4960448 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 50.0 | 4.70e-01 | 100.0% | 86.0% |
| 3715217 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 49.0 | 3.93e-01 | 100.0% | 52.9% |
| 3408484 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 49.0 | 4.17e-01 | 100.0% | 75.7% |
| 3998607 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 47.0 | 4.08e-01 | 100.0% | 77.0% |
| 3628355 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 46.0 | 3.12e-01 | 100.0% | 24.1% |
| 5081194 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 37.0 | 3.89e-01 | 79.3% | 78.7% |
| 4292124 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.54 | 48.0 | 3.69e-01 | 100.0% | 67.9% |
| 3836690 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.54 | 41.0 | 3.55e-01 | 100.0% | 51.1% |
| 3944143 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 47.0 | 3.83e-01 | 100.0% | 98.1% |
| 3639264 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.53 | 46.0 | 2.89e-01 | 98.8% | 19.2% |
| 3869259 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.52 | 46.0 | 3.76e-01 | 100.0% | 60.0% |
| 2226 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.73e-01 | 98.8% | 21.4% |
| 3490957 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 35.0 | 3.62e-01 | 86.6% | 80.0% |