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KX557288.1__AON97433.1__SEA_CHEWYVIII_10__00010

Bact-Vir

KX557288.1__AON97433.1__SEA_CHEWYVIII_10__00010

Identity

Accession:
KX557288 ↗
Kingdom:
phage

Quality

51.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chewyvirus› Rhodococcus_phage_ChewyVIII

TaxID: 1887657

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-101
PDB
D2 high residues 122-182
PDB
Domain cluster: rep: OR521068.1__WNO26741.1__SEA_GROUNDHOG_54__00053__D79-133
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.60 48.0 4.56e-01 100.0% 74.0%
1md6A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 44.0 3.40e-01 82.0% 96.1%
2zxdA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 39.0 3.44e-01 85.2% 45.1%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 48.0 3.92e-01 88.5% 83.6%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 46.0 3.74e-01 88.5% 97.5%
3t7aA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 48.0 3.46e-01 100.0% 42.6%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.57 45.0 3.71e-01 88.5% 98.3%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.56 41.0 3.27e-01 80.3% 78.9%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.56 44.0 4.14e-01 86.9% 89.5%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.42e-01 86.9% 88.3%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 40.0 2.55e-01 77.0% 43.9%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 48.0 4.24e-01 100.0% 69.9%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.55 41.0 4.23e-01 95.1% 98.1%
2qyuA03 3.40.1850.10 Alpha Beta › 3-Layer(aba) Sandwich › HECT-like ubiquitin ligase fold › HECT-like ubiquitin ligase 0.54 38.0 3.72e-01 80.3% 80.0%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 39.0 2.97e-01 80.3% 58.3%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 46.0 4.09e-01 100.0% 74.4%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 43.0 3.49e-01 95.1% 90.0%
1knmA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 37.0 3.03e-01 80.3% 98.4%
4ec7A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.51 40.0 3.37e-01 86.9% 77.8%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 37.0 3.76e-01 83.6% 96.7%
3i10A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.50 37.0 2.50e-01 83.6% 98.2%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282690 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.67 49.0 3.95e-01 90.2% 40.0%
3066663 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.63 49.0 3.14e-01 85.2% 62.2%
5013892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.90e-01 91.8% 96.4%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.82e-01 91.8% 90.0%
3978624 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 50.0 4.13e-01 100.0% 49.2%
4995678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.76e-01 85.2% 94.5%
4972823 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.51e-01 91.8% 98.0%
5003044 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.59 47.0 3.42e-01 95.1% 42.5%
3980228 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 49.0 4.05e-01 100.0% 49.6%
3683602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.08e-01 83.6% 65.3%
4980648 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.56e-01 95.1% 82.9%
4165723 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.58 45.0 4.44e-01 96.7% 83.1%
3634374 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 41.0 4.41e-01 86.9% 92.0%
5024154 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 49.0 4.48e-01 100.0% 85.9%
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.57 43.0 4.43e-01 93.4% 96.4%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.36e-01 91.8% 98.2%
4273414 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 49.0 4.72e-01 100.0% 94.3%
4204303 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 49.0 4.37e-01 100.0% 71.1%
4163711 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 49.0 4.40e-01 100.0% 76.5%
3720177 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 43.0 2.99e-01 86.9% 96.1%
3263031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.52e-01 100.0% 95.4%
4128405 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 48.0 4.60e-01 98.4% 92.9%
5036616 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 43.0 4.20e-01 93.4% 81.4%
3242374 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.55 41.0 3.50e-01 83.6% 67.6%
4854958 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 47.0 4.14e-01 100.0% 68.8%
3292420 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 47.0 4.23e-01 100.0% 73.3%
4111597 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.55 47.0 4.62e-01 98.4% 98.5%
3973553 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 47.0 4.55e-01 100.0% 94.3%
5020988 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.55 41.0 2.92e-01 83.6% 99.0%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.96e-01 93.4% 78.5%
3840052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 35.0 3.86e-01 80.3% 100.0%
3743973 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 41.0 3.84e-01 85.2% 76.2%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 40.0 4.01e-01 85.2% 100.0%
4526316 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 46.0 4.03e-01 100.0% 71.6%
3199895 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 45.0 3.99e-01 98.4% 68.4%
4512995 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 46.0 4.45e-01 100.0% 95.7%
3296864 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.53 39.0 4.00e-01 91.8% 86.7%
4047241 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 45.0 3.99e-01 100.0% 69.5%
3947081 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.53 39.0 3.92e-01 82.0% 100.0%
4281020 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 45.0 3.98e-01 100.0% 69.5%
3389763 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.53 45.0 3.96e-01 100.0% 82.1%
2814716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.52 44.0 3.93e-01 100.0% 70.5%
3708407 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.52 44.0 4.05e-01 100.0% 100.0%
4087314 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.52 45.0 4.15e-01 100.0% 83.7%
3994214 363.1.1.1 ↗ few secondary structure elements › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin_1 0.52 37.0 3.65e-01 75.4% 83.1%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 4.03e-01 91.8% 98.3%
3660563 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.75e-01 83.6% 98.5%
3940203 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.51 38.0 3.37e-01 85.2% 82.0%
3614414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.97e-01 98.4% 94.8%
3510937 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.51 43.0 3.72e-01 100.0% 83.8%
4480171 2003.1.10.2 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Dala_Dala_lig_N 0.51 40.0 3.62e-01 95.1% 93.7%
3252094 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 3.10e-01 80.3% 73.0%
4012945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 42.0 4.02e-01 100.0% 97.3%