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KX557288.1__AON97463.1__SEA_CHEWYVIII_41__00041
Bact-VirKX557288.1__AON97463.1__SEA_CHEWYVIII_41__00041
Identity
- Accession:
- KX557288 ↗
- Kingdom:
- phage
Quality
72.4
mean pLDDT
Taxonomy
TaxID: 1887657
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-119
Domain cluster:
representative
D2
medium
residues 120-191
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.75 | 57.0 | 4.70e-01 | 79.2% | 78.5% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 55.0 | 5.27e-01 | 79.2% | 76.5% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 41.0 | 4.03e-01 | 77.8% | 57.7% |
| 1kl9A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.65 | 54.0 | 4.99e-01 | 91.7% | 90.2% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 44.0 | 3.97e-01 | 77.8% | 75.0% |
| 1nu7D02 | 1.20.120.760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle, domain 2 | 0.60 | 52.0 | 4.33e-01 | 98.6% | 92.2% |
| 4d3zA02 | 1.10.132.130 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.59 | 50.0 | 4.37e-01 | 93.1% | 79.1% |
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 43.0 | 3.47e-01 | 91.7% | 40.0% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.57 | 44.0 | 4.16e-01 | 83.3% | 76.1% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 48.0 | 3.94e-01 | 91.7% | 73.8% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 40.0 | 3.96e-01 | 75.0% | 76.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3773064 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.72 | 61.0 | 3.56e-01 | 93.1% | 25.4% |
| 4994067 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.66 | 49.0 | 4.42e-01 | 79.2% | 69.0% |
| 3563012 | 142.1.1.22 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C | 0.65 | 52.0 | 5.12e-01 | 91.7% | 87.5% |
| 5052428 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.61 | 42.0 | 4.03e-01 | 72.2% | 81.0% |
| 5079633 | 7094.1.1.4 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › PF27273 | 0.54 | 43.0 | 4.08e-01 | 91.7% | 72.9% |
| 3345966 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.53 | 40.0 | 4.02e-01 | 81.9% | 77.3% |