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KX557288.1AON97475.1SEA_CHEWYVIII_53__00052

Bact-Vir

KX557288.1__AON97475.1__SEA_CHEWYVIII_53__00052

Identity

Accession:: KX557288 ↗
Kingdom:: phage

Quality

74.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chewyvirus› Rhodococcus_phage_ChewyVIII

TaxID: 1887657

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-94

PDB

Domain cluster: rep: MF919510.1__ATN89561.1__SEA_KABLUNA_40__00041__D24-92

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fgxA00	3.30.2220.10	Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171	0.61	48.0	4.65e-01	88.1%	80.2%
7yugA01	1.10.10.2590	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain	0.55	41.0	3.74e-01	78.6%	89.4%
4ivkA00	3.40.710.10	Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily	0.55	42.0	2.78e-01	85.7%	69.8%
3vfzB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	35.0	3.90e-01	94.0%	88.9%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3284055	628.1.1.1 ↗	alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD	0.61	45.0	3.90e-01	79.8%	75.7%
3587755	101.1.1.31 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4	0.60	36.0	3.19e-01	100.0%	38.5%
3185929	101.1.1.3 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding	0.58	32.0	3.29e-01	85.7%	55.0%
4013706	244.1.1.9 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C	0.54	46.0	3.44e-01	98.8%	79.6%
3455206	2006.1.1.18 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2	0.53	42.0	3.06e-01	100.0%	30.0%
4321923	3054.1.1.0 ↗	alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol	0.53	36.0	3.28e-01	88.1%	51.3%
5070802	5060.1.1.1 ↗	alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39	0.53	37.0	3.39e-01	95.2%	55.0%
3854525	101.1.1.53 ↗	alpha arrays › HTH › HTH › Three-helical HTH › BEN	0.52	38.0	3.43e-01	77.4%	69.6%
5062459	5060.1.1.1 ↗	alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39	0.52	44.0	3.41e-01	92.9%	63.8%
3730254	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.51	41.0	3.39e-01	90.5%	66.1%
3576492	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.51	38.0	3.81e-01	82.1%	81.1%
2084570	592.7.1.1 ↗	alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2	0.50	41.0	4.05e-01	95.2%	100.0%

D2 high residues 107-182

PDB

Domain cluster: rep: KU985096.1__AMW64376.1__PBI_KAZAN_28__00025__D6-74

D3 high residues 209-269

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6srbA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.69	47.0	3.89e-01	72.1%	45.0%
2e9fB01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.64	44.0	3.74e-01	70.5%	60.4%
4e6nA02	6.10.140.1010	Special › Helix non-globular › Helix Hairpins ›	0.63	43.0	4.21e-01	70.5%	75.8%
4mndA02	1.20.120.1760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain	0.59	49.0	3.58e-01	100.0%	73.8%
1wa8A00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.55	44.0	3.84e-01	91.8%	98.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3336946	192.1.1.14 ↗	alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › MPH2	0.76	52.0	5.25e-01	70.5%	91.7%
4648944	101.1.2.88 ↗	alpha arrays › HTH › HTH › winged helix domain › Dimerisation	0.57	51.0	3.49e-01	100.0%	58.6%
4031566	186.1.1.0 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N	0.54	36.0	2.98e-01	70.5%	52.5%