←Back to structures

KX578042.1__AOT27910.1__X__00042

Bact-Vir

KX578042.1__AOT27910.1__X__00042

Identity

Accession:
KX578042 ↗
Kingdom:
phage

Quality

65.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Unaquatrovirus› Leuconostoc_phage_Ln-7

TaxID: 1897736

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-111
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.67 54.0 4.36e-01 84.9% 72.7%
4zk3A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.67 53.0 4.36e-01 84.9% 74.0%
2peeB02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.63 50.0 4.08e-01 84.9% 75.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.97e-01 93.2% 93.7%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.63 46.0 3.84e-01 75.3% 94.4%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.63 51.0 4.35e-01 90.4% 74.8%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.33e-01 84.9% 80.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.85e-01 93.2% 87.0%
5iz3A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 55.0 4.18e-01 100.0% 85.1%
3k1lA02 3.30.457.30 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.61 41.0 3.93e-01 94.5% 57.8%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.61 46.0 4.14e-01 82.2% 75.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.64e-01 91.8% 89.4%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.60 52.0 4.20e-01 97.3% 85.8%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 48.0 3.29e-01 93.2% 39.8%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.38e-01 90.4% 84.7%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 48.0 3.34e-01 100.0% 74.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 38.0 3.79e-01 75.3% 70.7%
2c9kA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.54 40.0 3.03e-01 80.8% 91.8%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 41.0 3.49e-01 82.2% 88.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.54 46.0 3.75e-01 95.9% 51.4%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 3.57e-01 91.8% 95.0%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 39.0 3.91e-01 89.0% 77.3%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 40.0 4.07e-01 90.4% 85.7%
4omfA00 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.53 46.0 2.95e-01 100.0% 78.4%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.52 44.0 3.98e-01 100.0% 95.5%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.81e-01 75.3% 85.3%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 4.10e-01 93.2% 86.7%
4c2dA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 41.0 3.85e-01 90.4% 90.3%
2ijrA01 3.30.70.1270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains 0.51 43.0 3.93e-01 94.5% 89.7%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4221174 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.81 74.0 6.74e-01 100.0% 81.1%
4033339 520.1.1.2 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › PF27308 0.80 70.0 6.66e-01 98.6% 81.2%
4033743 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.79 69.0 6.58e-01 100.0% 81.2%
4954308 210.1.1.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.77 51.0 3.59e-01 86.3% 23.3%
4031359 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.77 67.0 6.40e-01 100.0% 82.4%
4106800 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.74 53.0 4.78e-01 87.7% 56.8%
3988729 4097.1.1.0 ↗ a+b two layers › Lp2179-like › Lp2179-like › Lp2179-like 0.68 44.0 4.05e-01 82.2% 50.5%
3291499 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 55.0 4.32e-01 93.2% 52.7%
3230359 207.1.1.66 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.62 37.0 2.49e-01 79.5% 14.9%
3750640 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.59 43.0 3.80e-01 78.1% 68.2%
3610987 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.58 49.0 4.08e-01 91.8% 99.2%
4936914 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.57 44.0 3.97e-01 90.4% 59.0%
3615426 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.56 42.0 3.37e-01 80.8% 42.7%
3719460 101.1.12.0 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.56 46.0 3.86e-01 91.8% 99.2%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.55 42.0 4.02e-01 86.3% 78.9%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 39.0 3.95e-01 76.7% 76.0%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 39.0 3.91e-01 76.7% 81.3%
3702988 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.54 48.0 4.27e-01 100.0% 89.5%
3898370 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 36.0 3.89e-01 72.6% 86.2%
5012842 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 44.0 4.26e-01 93.2% 92.9%
5009130 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.52 41.0 2.68e-01 98.6% 18.3%
4400687 2004.1.1.782 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B 0.52 41.0 2.56e-01 98.6% 14.3%
4575757 12.1.1.4 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C 0.52 38.0 3.30e-01 76.7% 100.0%
D2 high residues 184-247
PDB