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KX620754.1__AOT24613.1__G4_24__00024
Bact-VirKX620754.1__AOT24613.1__G4_24__00024
Identity
- Accession:
- KX620754 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
TaxID: 1897537
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-154
Domain cluster:
rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01510.31 best | Amidase_2 | 50.2 | 4.70e-13 | 78.1% | 98.5% |
D2
high
residues 182-266
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 31.4 | 2.50e-07 | 65.9% | 79.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lbuA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.89 | 68.0 | 6.92e-01 | 100.0% | 81.0% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 36.0 | 3.24e-01 | 71.8% | 54.5% |
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 37.0 | 3.24e-01 | 76.5% | 74.8% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 35.0 | 3.33e-01 | 70.6% | 95.3% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 3.38e-01 | 71.8% | 64.1% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.50 | 35.0 | 3.54e-01 | 96.5% | 72.6% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 37.0 | 3.23e-01 | 80.0% | 87.1% |
| 3um7A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 34.0 | 3.25e-01 | 70.6% | 62.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3299934 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 69.0 | 6.39e-01 | 100.0% | 67.6% |
| 3302194 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.85 | 68.0 | 6.56e-01 | 100.0% | 75.8% |
| 3957237 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.82 | 69.0 | 7.39e-01 | 98.8% | 100.0% |
| 3201809 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.81 | 64.0 | 6.65e-01 | 97.6% | 88.7% |
| 3764906 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.69 | 54.0 | 5.54e-01 | 83.5% | 86.3% |
| 4380943 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.54 | 42.0 | 3.48e-01 | 84.7% | 90.0% |
| 3990111 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.53 | 37.0 | 3.24e-01 | 72.9% | 50.8% |
| 5028755 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.53 | 36.0 | 3.54e-01 | 78.8% | 64.2% |
| 4034533 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.53 | 36.0 | 3.22e-01 | 72.9% | 49.2% |
| 4976369 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 37.0 | 3.44e-01 | 80.0% | 84.3% |
| 3785408 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 37.0 | 3.15e-01 | 80.0% | 65.2% |