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KX660669.1__APL99495.1__BB738_0370__00037

Bact-Vir

KX660669.1__APL99495.1__BB738_0370__00037

Identity

Accession:
KX660669 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-61_84-331
PDB
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e0zA01 3.30.2400.20 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.81 31.0 5.21e-01 95.4% 95.3%
3fz2A00 3.30.70.1700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U 0.69 23.0 3.37e-01 85.9% 63.3%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.67 18.0 3.30e-01 83.0% 72.2%
6i9gA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.67 37.0 4.80e-01 95.8% 90.5%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 18.0 2.95e-01 84.5% 59.5%
3bjqA00 3.90.1690.10 Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain 0.67 63.0 6.25e-01 100.0% 96.3%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 17.0 2.97e-01 86.6% 63.2%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.66 19.0 3.27e-01 90.1% 70.8%
3dktA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.66 37.0 4.69e-01 95.8% 90.5%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 18.0 2.89e-01 85.9% 58.9%
3qkbA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.65 24.0 4.02e-01 91.2% 95.7%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 16.0 2.79e-01 88.3% 61.5%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 15.0 2.49e-01 80.6% 54.0%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 21.0 3.17e-01 84.1% 71.6%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 17.0 2.80e-01 86.9% 64.4%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 19.0 2.88e-01 95.8% 63.2%
2gx8A02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 16.0 2.79e-01 83.4% 66.7%
3pfeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 22.0 3.24e-01 83.4% 74.6%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 16.0 2.58e-01 80.2% 59.2%
1ekrA00 3.30.70.640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain 0.57 21.0 2.82e-01 84.1% 59.4%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 19.0 2.81e-01 86.2% 74.4%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3090875 2485.3.1.14 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like 0.81 77.0 7.48e-01 97.2% 95.7%
3075730 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.81 76.0 7.18e-01 97.2% 89.0%
194954 2485.3.1.2 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.80 65.0 7.07e-01 99.3% 98.3%
3110786 2485.3.1.14 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like 0.79 75.0 6.90e-01 97.2% 88.1%
3946670 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.79 69.0 7.06e-01 100.0% 93.1%
4988094 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.79 67.0 7.08e-01 100.0% 97.3%
5011908 2485.3.1.2 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.78 62.0 6.72e-01 100.0% 95.0%
3949155 2485.3.1.11 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.77 65.0 6.77e-01 96.5% 92.8%
3603036 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.74 65.0 6.83e-01 100.0% 98.8%
3088027 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.74 63.0 6.51e-01 97.2% 92.5%
2988313 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.74 64.0 6.60e-01 97.2% 93.4%
2724409 2485.3.1.2 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.72 62.0 6.42e-01 99.6% 94.0%
3963274 2485.3.1.9 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.72 65.0 5.90e-01 93.3% 99.5%
4995674 2485.3.1.5 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.72 59.0 6.18e-01 100.0% 92.6%
3501742 2485.3.1.21 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phi29_MCP 0.72 67.0 6.48e-01 97.5% 95.2%
4929755 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.71 66.0 6.78e-01 100.0% 99.6%
5041371 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.71 69.0 6.63e-01 100.0% 99.7%
2831773 2485.3.1.2 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.71 61.0 6.27e-01 99.6% 93.6%
2651377 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.71 66.0 6.48e-01 97.2% 91.2%
2553816 2485.3.1.2 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.71 60.0 6.26e-01 99.6% 94.0%
5081487 2485.3.1.10 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.71 65.0 6.64e-01 95.1% 100.0%
4884207 2485.3.1.7 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.71 65.0 6.45e-01 96.8% 92.8%
4890673 2485.3.1.9 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.71 67.0 6.17e-01 98.6% 93.7%
3513770 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.71 68.0 6.66e-01 99.6% 99.0%
5081698 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.70 67.0 6.53e-01 100.0% 98.7%
5082710 2485.3.1.9 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.70 67.0 6.31e-01 100.0% 96.0%
2968064 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.70 64.0 5.97e-01 96.1% 93.4%
2842229 2485.3.1.9 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.69 64.0 5.84e-01 97.2% 92.9%
4241362 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.69 66.0 6.54e-01 100.0% 96.3%
4313471 2485.3.1.11 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.69 63.0 6.24e-01 98.6% 90.3%
3977985 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.69 65.0 5.98e-01 99.6% 79.9%
3942344 2485.3.1.19 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › PF30928 0.69 64.0 6.27e-01 97.2% 91.7%
2639625 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.69 60.0 6.05e-01 97.2% 91.1%
5083051 2485.3.1.12 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 0.68 66.0 6.56e-01 100.0% 97.9%
2995325 2485.3.1.9 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 0.68 64.0 5.76e-01 97.2% 91.0%
2806362 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.68 56.0 5.84e-01 98.2% 90.6%
4031028 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.68 64.0 6.48e-01 100.0% 98.9%
2538948 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.68 62.0 6.12e-01 96.5% 90.3%
3944238 2485.3.1.7 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.68 63.0 6.35e-01 96.8% 99.3%
3583655 2485.3.1.5 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.68 63.0 6.04e-01 97.2% 92.8%
2841509 2485.3.1.12 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 0.67 63.0 6.20e-01 96.5% 93.5%
2989372 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.67 63.0 6.17e-01 97.2% 92.4%
2899245 2485.3.1.10 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.67 62.0 5.77e-01 96.8% 92.2%
3952452 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.67 63.0 6.21e-01 100.0% 94.2%
2989363 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.67 62.0 6.03e-01 96.8% 93.2%
4954548 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.67 62.0 6.29e-01 100.0% 99.3%
3965498 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.67 62.0 5.91e-01 97.2% 93.5%
2989340 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.66 61.0 5.90e-01 97.2% 91.7%
2989356 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.66 61.0 6.08e-01 97.2% 94.2%
2995627 2485.3.1.7 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside 0.65 60.0 5.88e-01 96.1% 92.0%
1877546 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.65 60.0 5.93e-01 96.8% 93.0%
2806361 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.65 55.0 5.77e-01 100.0% 96.5%
5083079 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.65 62.0 5.86e-01 99.6% 99.4%
3277785 2485.3.1.0 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.64 57.0 5.94e-01 99.3% 100.0%
3610546 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.62 26.0 4.07e-01 91.2% 100.0%
5017604 872.3.1.1 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.62 22.0 3.88e-01 91.5% 100.0%
3587769 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.62 57.0 5.72e-01 100.0% 94.8%
3700802 304.20.1.0 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain 0.62 21.0 2.87e-01 87.3% 55.9%
2640765 2485.3.1.1 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E 0.62 57.0 5.25e-01 97.2% 95.5%
3977525 2485.3.1.4 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 0.62 58.0 5.51e-01 100.0% 97.6%
3797542 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 17.0 2.78e-01 84.8% 60.9%
3588084 2485.3.1.3 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.58 55.0 5.37e-01 99.6% 100.0%
5013821 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.57 21.0 3.14e-01 88.0% 75.8%
4081839 864.1.1.0 a+b two layers › DLC › DLC › DLC 0.54 23.0 3.61e-01 93.6% 100.0%