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KX669658.1__AOT25337.1__POA1180_29__00029

Bact-Vir

KX669658.1__AOT25337.1__POA1180_29__00029

Identity

Accession:
KX669658 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Abaiavirus› Ochrobactrum_phage_POA1180

TaxID: 1897640

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-93
PDB
Domain cluster: rep: MN988552.1__QIG76156.1__EVC24_135__00135__D61-135
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24746.2 best DUF7694 70.6 1.10e-19 67.0% 80.3%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v94B00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 46.0 4.66e-01 78.0% 100.0%
2f8mA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 41.0 4.31e-01 80.2% 77.2%
3l7xA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.61 51.0 4.20e-01 90.1% 54.8%
3r6fA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.60 50.0 4.41e-01 89.0% 62.3%
1emsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.60 49.0 4.35e-01 89.0% 65.4%
2kilA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.59 41.0 3.27e-01 84.6% 35.9%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.59 38.0 3.99e-01 79.1% 72.3%
2eo4A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.58 52.0 4.41e-01 98.9% 66.4%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.58 40.0 3.93e-01 79.1% 66.7%
1av5A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.58 47.0 4.40e-01 89.0% 77.9%
2g1dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 43.0 4.23e-01 79.1% 83.7%
5cs2A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.56 48.0 4.09e-01 95.6% 57.8%
4kc3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.86e-01 84.6% 69.5%
4ndhB00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.55 48.0 3.88e-01 97.8% 79.8%
4qjvA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.54 34.0 3.47e-01 83.5% 64.0%
7xx8A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 33.0 3.49e-01 80.2% 67.9%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.54 36.0 3.53e-01 85.7% 62.4%
3p0tA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.54 47.0 4.19e-01 100.0% 68.4%
3lpxB02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 36.0 3.57e-01 85.7% 67.0%
2qndA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 35.0 3.67e-01 78.0% 75.0%
2oo4A02 3.30.70.3310 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 3.95e-01 89.0% 95.5%
3k1rA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 35.0 3.38e-01 72.5% 94.6%
3n9xA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 37.0 3.09e-01 75.8% 50.0%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.51 35.0 3.53e-01 85.7% 70.2%
6bq9A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.51 35.0 3.47e-01 85.7% 69.1%
1vkvA01 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.51 43.0 3.49e-01 95.6% 55.0%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.69 49.0 4.54e-01 73.6% 76.3%
4873159 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.66 47.0 4.41e-01 73.6% 78.4%
4956884 304.30.1.1 ↗ a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A 0.65 38.0 4.11e-01 79.1% 69.3%
3281355 304.12.1.12 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GDH_ACT2 0.62 45.0 4.31e-01 84.6% 65.7%
2627446 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.61 43.0 3.34e-01 83.5% 34.7%
4932382 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.61 54.0 4.61e-01 100.0% 65.3%
4661002 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.60 49.0 4.34e-01 89.0% 64.9%
5029481 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.60 49.0 4.57e-01 90.1% 70.4%
4549948 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 41.0 3.75e-01 84.6% 54.2%
4937399 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.59 52.0 4.52e-01 98.9% 70.3%
4468793 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 37.0 3.98e-01 79.1% 74.7%
4937580 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.59 52.0 4.26e-01 95.6% 60.6%
4162122 2006.1.1.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.59 43.0 3.10e-01 78.0% 27.9%
4998447 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.59 52.0 4.35e-01 100.0% 58.7%
4927590 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.59 35.0 3.82e-01 85.7% 74.3%
4026166 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.59 52.0 4.22e-01 100.0% 62.9%
3384789 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 41.0 3.82e-01 84.6% 59.1%
3737322 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 35.0 3.87e-01 79.1% 73.3%
5074440 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.58 51.0 4.37e-01 96.7% 66.9%
165749 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.58 52.0 4.41e-01 98.9% 66.4%
4016474 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.58 51.0 4.05e-01 96.7% 55.7%
3642433 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.58 52.0 4.48e-01 100.0% 66.2%
3274375 312.1.1.11 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N 0.58 43.0 3.84e-01 90.1% 55.4%
3223461 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 35.0 3.74e-01 78.0% 70.0%
3251592 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.57 35.0 3.54e-01 79.1% 61.1%
5054097 305.1.1.10 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › PF27806 0.57 39.0 4.02e-01 89.0% 75.3%
4998391 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.55 37.0 3.72e-01 85.7% 70.0%
5064953 873.1.1.13 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.54 42.0 3.50e-01 83.5% 48.1%
3471344 2003.1.5.201 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25, Methyltransf_31 0.53 37.0 2.76e-01 72.5% 85.0%
3603235 242.1.1.2 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.53 35.0 3.48e-01 85.7% 63.0%
3641833 304.8.1.57 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.52 40.0 3.70e-01 84.6% 62.5%
5040564 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.52 37.0 3.00e-01 83.5% 36.8%
3511004 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 36.0 3.66e-01 84.6% 73.3%
3649210 101.1.9.2 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › SRP19 0.52 41.0 4.05e-01 91.2% 80.0%
4928793 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.52 45.0 3.81e-01 98.9% 60.0%
4889833 206.1.1.27 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › YukC 0.51 33.0 2.59e-01 85.7% 27.6%
3401247 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 38.0 3.81e-01 84.6% 77.4%
4582107 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.51 37.0 3.72e-01 86.8% 73.7%
4977050 312.1.1.2 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.51 43.0 3.55e-01 95.6% 58.3%
4030156 304.9.1.9 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_2 0.51 36.0 3.24e-01 74.7% 90.0%
4228321 304.113.1.0 ↗ a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain 0.51 35.0 3.51e-01 76.9% 69.5%
3682561 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.50 32.0 3.37e-01 79.1% 72.5%
3813426 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.50 31.0 3.20e-01 78.0% 62.2%