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KX752698.1__AON96975.1__SEA_TONENILI_257__00224
Bact-VirKX752698.1__AON96975.1__SEA_TONENILI_257__00224
Identity
- Accession:
- KX752698 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 1891703
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-24_109-156
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3llkA01 | 1.20.120.1960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain | 0.68 | 52.0 | 4.72e-01 | 83.3% | 63.3% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.63 | 45.0 | 3.47e-01 | 77.8% | 61.1% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.63 | 46.0 | 3.43e-01 | 77.8% | 32.8% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 51.0 | 4.66e-01 | 93.1% | 80.6% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.60 | 48.0 | 4.06e-01 | 87.5% | 83.3% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 43.0 | 3.48e-01 | 79.2% | 41.4% |
| 1yfmA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 48.0 | 4.09e-01 | 95.8% | 83.3% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 3.23e-01 | 95.8% | 38.5% |
| 1wwmA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.56 | 48.0 | 3.70e-01 | 100.0% | 86.1% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 51.0 | 4.02e-01 | 100.0% | 84.4% |
| 3ledA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 43.0 | 3.07e-01 | 83.3% | 80.8% |
| 4aurA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.19e-01 | 97.2% | 97.0% |
| 1c1kA02 | 1.10.220.50 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Bacteriophage T4, Gp59, helicase assembly protein, C-terminal domain | 0.53 | 40.0 | 3.44e-01 | 80.6% | 61.7% |
| 4kqcA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 3.63e-01 | 98.6% | 78.1% |
| 8sl7B01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 43.0 | 3.09e-01 | 100.0% | 87.6% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 35.0 | 3.54e-01 | 79.2% | 69.9% |
| 5eswB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.06e-01 | 88.9% | 86.8% |
| 1zylA03 | 1.20.1270.170 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 41.0 | 3.69e-01 | 91.7% | 66.0% |
| 1b4cA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 36.0 | 3.43e-01 | 83.3% | 60.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047749 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.74 | 59.0 | 5.54e-01 | 84.7% | 71.8% |
| 5074606 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.72 | 56.0 | 5.05e-01 | 87.5% | 61.0% |
| 4975293 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.71 | 57.0 | 5.15e-01 | 87.5% | 65.0% |
| 4947323 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.71 | 57.0 | 4.99e-01 | 86.1% | 61.0% |
| 4951200 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.70 | 60.0 | 5.75e-01 | 97.2% | 88.2% |
| 3518470 | 102.1.1.30 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_8 | 0.70 | 61.0 | 5.67e-01 | 97.2% | 82.2% |
| 3704187 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.69 | 55.0 | 4.77e-01 | 86.1% | 56.4% |
| 1822789 | 601.21.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › FAD_SOX | 0.66 | 51.0 | 4.48e-01 | 83.3% | 57.4% |
| 4935885 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.66 | 45.0 | 2.88e-01 | 70.8% | 60.3% |
| 4809777 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.65 | 54.0 | 4.75e-01 | 93.1% | 71.6% |
| 3736801 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.64 | 57.0 | 4.38e-01 | 100.0% | 78.2% |
| 3715445 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 50.0 | 4.76e-01 | 86.1% | 84.7% |
| 3902903 | 601.21.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr,FAD_SOX | 0.61 | 54.0 | 3.75e-01 | 100.0% | 50.0% |
| 168175 | 633.2.1.1 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun | 0.61 | 51.0 | 4.66e-01 | 93.1% | 80.6% |
| 4339359 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.60 | 53.0 | 4.39e-01 | 98.6% | 74.6% |
| 5010095 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.59 | 50.0 | 4.01e-01 | 91.7% | 65.2% |
| 3938230 | 5045.1.1.3 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I | 0.58 | 49.0 | 3.34e-01 | 94.4% | 48.1% |
| 5049807 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.57 | 41.0 | 4.27e-01 | 91.7% | 83.1% |
| 5065553 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.56 | 49.0 | 3.55e-01 | 100.0% | 52.1% |
| 3628125 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.56 | 43.0 | 4.25e-01 | 87.5% | 81.3% |
| 3515453 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.53 | 45.0 | 4.07e-01 | 93.1% | 68.0% |
| 3823825 | 101.35.1.23 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate | 0.51 | 37.0 | 3.81e-01 | 79.2% | 78.6% |
| 4573573 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.51 | 38.0 | 3.51e-01 | 91.7% | 63.3% |
D2
medium
residues 25-108
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fjqA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 46.0 | 3.07e-01 | 100.0% | 82.7% |
| 2or0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 43.0 | 3.41e-01 | 100.0% | 44.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4269820 | 3820.1.1.1 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI | 0.56 | 45.0 | 3.64e-01 | 92.9% | 77.2% |
| 4521765 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.52 | 39.0 | 3.43e-01 | 78.6% | 67.2% |
| 2409294 | 601.52.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › Flagellin_N | 0.50 | 43.0 | 3.72e-01 | 98.8% | 60.7% |