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KX774321.1__AOZ63611.1__SEA_WEASELS2_21__00021

Bact-Vir

KX774321.1__AOZ63611.1__SEA_WEASELS2_21__00021

Identity

Accession:
KX774321 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Weaselvirus› Rhodococcus_phage_Weasels2

TaxID: 1897437

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-86
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.66 36.0 4.18e-01 80.0% 77.3%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.64 42.0 3.46e-01 81.5% 37.6%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.63 39.0 2.67e-01 95.4% 17.4%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 35.0 2.44e-01 100.0% 19.0%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.55 41.0 2.49e-01 80.0% 48.1%
2l0cA00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 40.0 3.56e-01 87.7% 54.6%
1a90A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.29e-01 80.0% 53.7%
6uioC01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.25e-01 78.5% 55.3%
4owzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.51 40.0 3.26e-01 89.2% 56.0%
1av4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 40.0 2.57e-01 96.9% 61.1%
4e2xA01 6.20.50.110 Special › Other non-globular › N-terminal domain of TfIIb › Methyltransferase, zinc-binding domain 0.50 36.0 3.86e-01 87.7% 100.0%
4f0aB02 3.30.2460.20 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain 0.50 36.0 3.56e-01 78.5% 89.7%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3235657 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.71 46.0 5.45e-01 78.5% 97.8%
3723840 5.1.3.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.65 40.0 2.47e-01 78.5% 10.8%
3998929 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 54.0 4.24e-01 93.8% 51.5%
3706802 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.59 41.0 2.64e-01 80.0% 14.1%
3198568 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.59 44.0 3.53e-01 81.5% 39.3%
3986836 375.1.1.253 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 0.56 44.0 4.72e-01 98.5% 98.2%
3568382 2484.1.1.145 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 0.56 43.0 2.73e-01 100.0% 14.4%
3593664 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 49.0 3.84e-01 100.0% 77.1%
3188296 375.1.1.132 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NOB1_Zn_bind 0.55 40.0 4.21e-01 78.5% 85.0%
4283494 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.55 41.0 3.18e-01 81.5% 79.3%
4950639 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.53e-01 100.0% 86.6%
4975225 2011.1.1.11 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M42 0.53 45.0 2.98e-01 100.0% 92.3%
3676329 5.1.4.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.52 36.0 2.41e-01 78.5% 17.1%
3596525 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 43.0 3.54e-01 98.5% 78.5%
3967397 7503.1.1.8 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › DUF4136 0.51 42.0 3.34e-01 96.9% 72.7%
3193145 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.51 43.0 2.71e-01 100.0% 47.1%
3738561 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 3.43e-01 87.7% 55.2%
3827070 12.3.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.51 41.0 2.60e-01 100.0% 33.6%
3263832 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.51 42.0 3.57e-01 95.4% 56.2%
4251626 2.1.1.171 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Tea_C 0.51 36.0 2.96e-01 78.5% 99.3%
3251381 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.50 36.0 3.60e-01 84.6% 76.9%