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KX774321.1__AOZ63617.1__SEA_WEASELS2_27__00027

Bact-Vir

KX774321.1__AOZ63617.1__SEA_WEASELS2_27__00027

Identity

Accession:
KX774321 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-57
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.76 45.0 4.96e-01 89.1% 75.0%
4f0aB02 3.30.2460.20 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain 0.67 46.0 4.29e-01 70.9% 89.7%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.64 47.0 3.41e-01 80.0% 69.9%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.60 45.0 3.75e-01 100.0% 43.6%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 3.49e-01 98.2% 40.8%
3i3lA02 3.30.390.160 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.59 41.0 3.23e-01 78.2% 32.0%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.59 45.0 3.71e-01 100.0% 42.5%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 44.0 3.65e-01 100.0% 42.5%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 49.0 4.10e-01 98.2% 57.4%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 46.0 3.44e-01 89.1% 84.2%
3ly7A01 3.40.50.11830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 49.0 3.58e-01 100.0% 39.1%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.57 38.0 2.71e-01 74.5% 21.2%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.57 45.0 3.01e-01 89.1% 72.0%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.14e-01 100.0% 47.5%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 42.0 3.51e-01 98.2% 42.5%
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.56 34.0 2.94e-01 72.7% 36.0%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 40.0 3.39e-01 96.4% 41.7%
2yxdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 2.97e-01 89.1% 26.3%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 44.0 3.59e-01 92.7% 58.7%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.69e-01 100.0% 12.3%
3hk4A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 3.40e-01 100.0% 42.4%
4ckbD02 3.20.100.20 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › 0.53 40.0 2.82e-01 85.5% 54.1%
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.53 37.0 3.74e-01 76.4% 71.9%
1lyvA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 44.0 2.82e-01 94.5% 32.9%
3n4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 37.0 2.99e-01 80.0% 40.9%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.52 41.0 3.43e-01 100.0% 83.9%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 2.86e-01 90.9% 27.0%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.26e-01 100.0% 81.5%
2uxwA03 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.51 45.0 3.55e-01 100.0% 95.7%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 41.0 3.22e-01 96.4% 44.4%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.48e-01 100.0% 55.6%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 43.0 3.62e-01 98.2% 74.7%
6kghA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 40.0 3.13e-01 100.0% 35.7%
5h9fJ00 3.30.70.2660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 2.58e-01 81.8% 55.3%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.50 42.0 3.14e-01 98.2% 90.1%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.50 38.0 2.92e-01 94.5% 53.3%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3447043 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.83 51.0 6.20e-01 90.9% 100.0%
3647546 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.72 59.0 5.95e-01 98.2% 90.9%
3452042 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.70 57.0 5.80e-01 98.2% 90.9%
3367730 5.1.1.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › FBA_1 0.69 49.0 3.50e-01 98.2% 25.5%
3739035 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 58.0 5.67e-01 98.2% 85.0%
3205743 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.66 51.0 4.04e-01 87.3% 69.2%
3609014 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.66 42.0 2.78e-01 94.5% 15.7%
3507674 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.66 56.0 3.32e-01 100.0% 18.6%
5028346 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 45.0 4.43e-01 85.5% 68.3%
3925733 7579.1.1.28 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S28 0.65 52.0 3.18e-01 89.1% 23.4%
None 0.65 53.0 3.24e-01 90.9% 24.1%
3995914 101.1.21.0 alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.65 49.0 3.19e-01 81.8% 76.7%
3627921 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 50.0 3.65e-01 87.3% 42.5%
4980003 210.1.2.0 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.64 47.0 2.72e-01 90.9% 7.9%
3592572 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 56.0 4.54e-01 100.0% 67.3%
3718119 2004.1.1.348 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B 0.63 49.0 3.53e-01 98.2% 28.2%
4963974 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 55.0 3.36e-01 98.2% 18.8%
4281699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 42.0 3.81e-01 89.1% 50.7%
4546371 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.63 45.0 3.48e-01 76.4% 45.8%
3569462 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 47.0 3.61e-01 85.5% 41.4%
3508428 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 48.0 3.43e-01 100.0% 26.7%
5030377 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.62 50.0 3.87e-01 100.0% 38.5%
3315597 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.61 49.0 4.42e-01 100.0% 63.3%
3174350 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 50.0 4.77e-01 96.4% 78.5%
3785904 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 46.0 4.78e-01 83.6% 90.0%
3585474 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.09e-01 94.5% 67.6%
4670754 304.51.1.2 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs 0.60 45.0 3.09e-01 81.8% 90.7%
4996610 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 45.0 3.92e-01 100.0% 52.2%
5029082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 52.0 3.72e-01 100.0% 94.1%
4544858 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.59 49.0 2.91e-01 94.5% 60.2%
3587535 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.59 46.0 3.67e-01 100.0% 40.8%
3594026 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 3.86e-01 98.2% 53.7%
3788285 395.1.1.4 few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › Flocculin_t3 0.59 42.0 4.35e-01 76.4% 94.0%
3663237 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 45.0 4.05e-01 87.3% 68.8%
3355968 375.1.1.190 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Fra10Ac1 0.58 44.0 3.50e-01 81.8% 40.0%
3980438 4166.1.1.1 beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE 0.58 39.0 2.77e-01 87.3% 20.5%
4126255 4967.1.1.25 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N 0.57 48.0 3.10e-01 94.5% 35.6%
4233828 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.57 46.0 3.88e-01 90.9% 67.4%
3995204 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.57 40.0 3.86e-01 80.0% 64.6%
4073433 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 46.0 4.06e-01 89.1% 70.0%
5071164 210.1.2.1 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.57 45.0 2.51e-01 94.5% 6.6%
3484620 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 41.0 3.53e-01 92.7% 47.4%
3730893 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 45.0 3.80e-01 89.1% 54.7%
3824181 375.1.1.21 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.56 45.0 4.43e-01 100.0% 88.3%
5083453 304.139.1.3 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 0.56 43.0 2.80e-01 89.1% 65.3%
5018717 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 47.0 4.76e-01 92.7% 92.7%
3920715 2004.1.1.674 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21, AAA_23, SbcC_Walker_B 0.55 47.0 2.74e-01 100.0% 47.5%
3489010 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 46.0 3.63e-01 98.2% 54.4%
4966827 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 45.0 3.53e-01 94.5% 58.3%
3600530 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 39.0 2.74e-01 81.8% 83.4%
1553111 2.1.1.5 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17,Ribosomal_S17_N 0.54 43.0 3.14e-01 90.9% 40.8%
3636874 220.1.1.69 beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.53 45.0 3.43e-01 98.2% 46.4%
3917042 214.1.1.7 a+b two layers › SH2 › SH2 › SH2 › SH2_1 0.53 44.0 3.34e-01 92.7% 56.3%
1553361 2.1.1.5 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17,Ribosomal_S17_N 0.53 44.0 3.91e-01 96.4% 76.5%
4972327 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.53 44.0 3.82e-01 100.0% 84.2%
3410286 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.52 41.0 3.54e-01 98.2% 52.6%
3689675 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.52 42.0 3.79e-01 100.0% 98.8%
3665275 2004.1.1.187 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 0.52 41.0 2.98e-01 98.2% 49.5%
4022601 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 38.0 3.17e-01 83.6% 42.7%
3706026 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.51 41.0 2.76e-01 90.9% 23.4%
3592296 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 40.0 3.30e-01 96.4% 98.3%
3959362 101.1.1.531 alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat 0.50 41.0 3.05e-01 92.7% 65.3%