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KX774374.1__AOY11818.1__X__00013

Bact-Vir

KX774374.1__AOY11818.1__X__00013

Identity

Accession:
KX774374 ↗
Kingdom:
phage

Quality

73.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Playavirus› Salinivibrio_phage_SMHB1

TaxID: 1897436

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-63
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 69.0 6.84e-01 100.0% 86.5%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 6.37e-01 100.0% 88.2%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 6.24e-01 100.0% 90.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 63.0 6.15e-01 100.0% 87.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 66.0 6.26e-01 100.0% 86.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.73 65.0 4.99e-01 100.0% 52.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.84e-01 100.0% 79.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 6.30e-01 100.0% 94.1%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.72 64.0 5.08e-01 100.0% 62.9%
3h6zA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 4.71e-01 100.0% 50.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 4.87e-01 100.0% 51.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.18e-01 100.0% 70.9%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.69 59.0 4.67e-01 100.0% 48.0%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.06e-01 100.0% 60.2%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.36e-01 100.0% 87.5%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 52.0 4.36e-01 95.9% 50.6%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.69e-01 100.0% 66.7%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 57.0 4.27e-01 100.0% 44.5%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.91e-01 100.0% 78.8%
1mv3A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 4.72e-01 100.0% 93.2%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 54.0 5.10e-01 100.0% 80.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 4.90e-01 100.0% 88.2%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 53.0 5.12e-01 100.0% 93.0%
2p5zX04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.62 47.0 4.41e-01 87.8% 98.5%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 52.0 3.55e-01 100.0% 29.3%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 51.0 4.02e-01 100.0% 50.0%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 46.0 4.37e-01 89.8% 73.8%
4aqcB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 44.0 3.59e-01 81.6% 82.3%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 45.0 3.22e-01 91.8% 26.5%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 45.0 3.58e-01 87.8% 68.8%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.56 42.0 3.63e-01 83.7% 77.1%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 42.0 3.64e-01 93.9% 53.8%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.54 43.0 2.90e-01 95.9% 25.8%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 41.0 3.11e-01 89.8% 85.2%
4rnyA03 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.53 42.0 3.20e-01 91.8% 96.9%
3h7tA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 40.0 3.27e-01 91.8% 70.3%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.63e-01 100.0% 21.4%
1zu0A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 40.0 2.82e-01 89.8% 80.7%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 41.0 3.05e-01 98.0% 48.6%
3dlbA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 43.0 3.01e-01 100.0% 95.4%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3826751 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.85 76.0 6.44e-01 100.0% 72.5%
3715776 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 62.0 5.63e-01 100.0% 60.0%
3964846 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.81 63.0 5.27e-01 100.0% 49.4%
3373583 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 71.0 6.31e-01 100.0% 82.9%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.80 60.0 5.86e-01 100.0% 74.5%
3707346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 72.0 5.99e-01 100.0% 78.3%
3229356 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 5.41e-01 100.0% 63.8%
3514522 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 70.0 6.06e-01 100.0% 86.7%
3313139 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 69.0 4.68e-01 100.0% 41.7%
3319789 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.78 69.0 5.75e-01 100.0% 70.6%
3645395 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 69.0 5.87e-01 100.0% 88.7%
3834563 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 69.0 5.84e-01 100.0% 73.8%
3658643 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 68.0 4.84e-01 100.0% 40.0%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.36e-01 100.0% 52.0%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 68.0 6.25e-01 100.0% 75.4%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 4.36e-01 100.0% 24.2%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.77 68.0 6.03e-01 100.0% 74.3%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 67.0 4.72e-01 100.0% 39.3%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 69.0 4.64e-01 100.0% 54.1%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.76 68.0 6.04e-01 100.0% 78.6%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.76 66.0 5.26e-01 100.0% 100.0%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.78e-01 100.0% 78.7%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.75 67.0 6.50e-01 100.0% 92.7%
4032729 4.1.1.168 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2187 0.74 67.0 6.32e-01 100.0% 84.5%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.54e-01 100.0% 80.0%
3617111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 58.0 4.77e-01 100.0% 48.9%
4193599 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 64.0 4.96e-01 100.0% 57.1%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.10e-01 100.0% 55.8%
3634475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.55e-01 100.0% 91.4%
5039070 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.71 57.0 4.30e-01 89.8% 63.3%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 62.0 5.30e-01 100.0% 77.2%
3688447 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.70 56.0 4.08e-01 87.8% 76.2%
3749631 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.70 55.0 4.30e-01 91.8% 41.0%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.07e-01 100.0% 70.6%
3272363 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.70 59.0 4.88e-01 100.0% 58.9%
3304271 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 55.0 4.59e-01 87.8% 83.5%
4995678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.64e-01 100.0% 85.5%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.28e-01 100.0% 75.0%
4625119 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.69 56.0 4.60e-01 89.8% 82.0%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.38e-01 100.0% 80.0%
3489469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 4.65e-01 100.0% 79.0%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 58.0 4.78e-01 100.0% 84.2%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 59.0 4.82e-01 100.0% 54.7%
4483091 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 58.0 4.62e-01 100.0% 62.9%
3619225 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.68 57.0 3.89e-01 95.9% 30.0%
3879216 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.00e-01 98.0% 89.3%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 59.0 5.05e-01 100.0% 65.0%
3584246 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.67 54.0 4.37e-01 93.9% 51.9%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 58.0 4.99e-01 100.0% 75.0%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 59.0 5.03e-01 100.0% 63.7%
4073433 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 56.0 4.91e-01 100.0% 73.8%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 58.0 5.11e-01 100.0% 68.0%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 4.81e-01 100.0% 97.6%
3706000 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 55.0 4.87e-01 100.0% 86.7%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.00e-01 100.0% 82.9%
2321269 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.65 55.0 4.69e-01 100.0% 66.7%
3586192 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.64 52.0 4.66e-01 95.9% 69.3%
184917 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.64 53.0 4.33e-01 100.0% 51.5%
3703130 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 4.37e-01 89.8% 82.7%
3402051 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 50.0 4.37e-01 95.9% 62.8%
3744711 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.60 49.0 3.47e-01 100.0% 32.4%
4504922 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.58 45.0 4.00e-01 91.8% 57.3%
3728770 220.1.1.201 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.56 45.0 3.57e-01 91.8% 80.0%
4028300 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.65e-01 98.0% 60.9%
1822815 6173.1.1.1 ↗ beta barrels › V1/V2 domain in HIV gp120 › V1/V2 domain in HIV gp120 › V1/V2 domain in HIV gp120 › GP120 0.55 40.0 4.08e-01 81.6% 100.0%
4109603 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.55 45.0 3.79e-01 95.9% 81.8%
3169095 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.54 45.0 3.85e-01 98.0% 84.7%
4233828 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.53 44.0 3.63e-01 98.0% 73.7%
D2 high residues 77-151
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.73 59.0 4.71e-01 86.7% 93.8%
2pbeA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.72 59.0 4.93e-01 88.0% 56.3%
3qa8A04 1.20.1270.250 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.72 57.0 3.98e-01 85.3% 74.7%
2z4sA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 40.0 4.14e-01 80.0% 61.1%
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.67 53.0 5.64e-01 85.3% 97.0%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 51.0 5.35e-01 85.3% 91.2%
1lkvX02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.62 49.0 4.15e-01 88.0% 69.7%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.62 53.0 4.92e-01 96.0% 92.6%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.60 44.0 4.26e-01 77.3% 72.9%
4gm2A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.59 47.0 3.52e-01 85.3% 56.3%
4aidA02 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.59 45.0 4.42e-01 84.0% 75.6%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 48.0 4.82e-01 100.0% 92.2%
5jnmA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.58 43.0 3.38e-01 81.3% 40.2%
3d6jA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 42.0 4.43e-01 96.0% 88.1%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 41.0 3.67e-01 74.7% 75.9%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 46.0 4.47e-01 89.3% 85.9%
4ol8B03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.57 50.0 4.73e-01 100.0% 84.4%
2nyvA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 41.0 4.41e-01 96.0% 90.6%
2xtzA02 1.10.400.10 Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like 0.57 48.0 4.16e-01 98.7% 63.5%
2n00A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.57 49.0 4.57e-01 97.3% 84.2%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 43.0 4.47e-01 96.0% 89.9%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.57 45.0 3.47e-01 85.3% 67.1%
2i0mA02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 38.0 3.48e-01 72.0% 75.2%
1fkwA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 44.0 2.98e-01 100.0% 20.3%
3hssA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 44.0 3.06e-01 90.7% 85.8%
2q14B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 45.0 3.26e-01 93.3% 41.6%
3hzsA00 1.10.3810.10 Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like 0.54 45.0 3.38e-01 96.0% 78.9%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 3.18e-01 100.0% 33.9%
3k3wB03 1.10.1400.10 Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region 0.54 46.0 3.73e-01 100.0% 51.6%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.54 43.0 3.73e-01 89.3% 62.6%
2hxoA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 39.0 3.17e-01 77.3% 53.5%
2p0tA01 1.10.60.30 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains 0.53 41.0 4.15e-01 96.0% 86.8%
4o6kA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.53 45.0 3.79e-01 98.7% 55.9%
3ezuA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 43.0 3.35e-01 93.3% 73.6%
3tm8B00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 40.0 2.72e-01 84.0% 53.7%
1ujnA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.52 47.0 3.59e-01 98.7% 71.4%
1b0bA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 42.0 3.56e-01 93.3% 91.5%
2zuvA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 40.0 2.70e-01 85.3% 93.8%
2fgyA01 1.20.120.1310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain 0.51 41.0 3.63e-01 86.7% 62.6%
1a3qA01 2.60.40.340 Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain 0.51 35.0 2.67e-01 72.0% 40.8%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063438 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.65 48.0 3.64e-01 100.0% 32.8%
3623379 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 55.0 5.17e-01 98.7% 96.8%
3253767 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 42.0 3.26e-01 86.7% 32.9%
4400920 5076.2.1.6 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Glucan_synthase 0.63 46.0 3.25e-01 76.0% 64.1%
4979252 620.1.1.6 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.63 53.0 4.26e-01 94.7% 94.8%
4928215 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.63 49.0 4.56e-01 84.0% 76.8%
4927487 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.62 41.0 4.11e-01 74.7% 68.0%
3707869 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 45.0 4.07e-01 76.0% 88.0%
3428408 632.2.1.30 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › Auxin_canalis 0.62 46.0 4.70e-01 85.3% 81.3%
4623986 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.61 41.0 2.85e-01 73.3% 20.8%
3298752 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.60 40.0 3.50e-01 70.7% 44.3%
4127216 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.59 41.0 3.58e-01 72.0% 50.4%
None — 0.59 41.0 2.85e-01 72.0% 22.7%
5019837 2003.1.1.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.59 41.0 2.85e-01 72.0% 22.7%
3467691 150.5.1.76 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF1110 0.59 41.0 3.99e-01 73.3% 67.1%
3693379 2002.1.1.41 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.59 47.0 3.10e-01 100.0% 19.4%
135966 2002.1.1.41 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.59 50.0 3.26e-01 97.3% 95.0%
3689730 190.1.1.3 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 0.58 42.0 4.01e-01 74.7% 94.1%
5072202 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.58 48.0 3.62e-01 92.0% 56.3%
5019719 7518.1.1.6 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A 0.58 44.0 3.72e-01 81.3% 73.6%
3422310 150.1.1.87 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Erg28 0.58 47.0 4.07e-01 97.3% 71.6%
3974456 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.57 45.0 4.57e-01 85.3% 89.3%
3741090 5069.1.1.39 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Glucan_synthase 0.55 44.0 3.09e-01 85.3% 57.9%
None — 0.55 42.0 2.72e-01 82.7% 38.6%
3930038 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 47.0 4.49e-01 100.0% 93.3%
3672993 150.5.1.6 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF3082 0.55 41.0 3.60e-01 81.3% 77.4%
3740460 101.1.2.113 ↗ alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 0.55 38.0 2.95e-01 73.3% 86.3%
3194068 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.54 40.0 3.86e-01 100.0% 69.4%
3281751 5050.1.1.20 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_4 0.54 43.0 3.31e-01 89.3% 50.8%
3886230 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.54 42.0 3.15e-01 86.7% 73.4%
3838282 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.54 35.0 3.27e-01 82.7% 51.6%
3487017 7581.1.1.0 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.53 47.0 2.88e-01 98.7% 62.7%
4022055 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.86e-01 77.3% 50.7%
4943370 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 45.0 2.89e-01 100.0% 42.9%
3999454 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 38.0 2.93e-01 82.7% 55.4%
3598425 195.1.1.0 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like 0.51 39.0 3.08e-01 84.0% 60.0%