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KX815270.1__APC43902.1__P19250A_0017__00017
Bact-VirKX815270.1__APC43902.1__P19250A_0017__00017
Identity
- Accession:
- KX815270 ↗
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-159
Domain cluster:
rep: OQ326496.2__WDQ45522.1__X__00066__D7-128
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 36.0 | 4.50e-01 | 91.6% | 83.3% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 41.0 | 4.52e-01 | 94.2% | 75.0% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 31.0 | 3.90e-01 | 81.2% | 71.6% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 34.0 | 4.05e-01 | 93.5% | 79.8% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 31.0 | 3.97e-01 | 95.5% | 82.8% |
| 2z0uA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.60 | 37.0 | 4.04e-01 | 98.1% | 73.4% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.56 | 36.0 | 4.16e-01 | 92.2% | 89.2% |
| 6fhvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 33.0 | 4.00e-01 | 94.2% | 90.8% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 4.22e-01 | 94.8% | 77.1% |
| 4jcmA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 32.0 | 3.73e-01 | 98.1% | 83.7% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 29.0 | 3.40e-01 | 81.2% | 74.3% |
| 1qhoA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.74e-01 | 98.1% | 84.3% |
| 5w4tB03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 36.0 | 4.19e-01 | 83.8% | 100.0% |
| 6fexA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 29.0 | 3.55e-01 | 92.2% | 87.9% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.86e-01 | 94.2% | 67.6% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 33.0 | 3.92e-01 | 87.7% | 100.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4189243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 41.0 | 4.42e-01 | 94.2% | 71.5% |
| 4982153 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 51.0 | 4.22e-01 | 94.2% | 48.9% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.61 | 53.0 | 5.36e-01 | 94.8% | 96.1% |
| 5003644 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.61 | 30.0 | 3.37e-01 | 94.8% | 58.4% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.59 | 52.0 | 5.08e-01 | 97.4% | 86.8% |
| 3645446 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 34.0 | 3.52e-01 | 100.0% | 60.0% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.58 | 44.0 | 4.81e-01 | 91.6% | 96.8% |
| 4026343 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.54 | 30.0 | 3.73e-01 | 90.3% | 87.4% |
| 3970088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 27.0 | 3.33e-01 | 78.6% | 75.8% |
| 3911678 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.52 | 40.0 | 4.01e-01 | 98.7% | 77.5% |
| 3484171 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 32.0 | 3.32e-01 | 100.0% | 62.7% |
| 4218947 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.60e-01 | 84.4% | 72.2% |
| 3419963 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.51 | 34.0 | 3.77e-01 | 92.2% | 84.8% |
| 5035109 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.50 | 37.0 | 3.34e-01 | 76.0% | 91.4% |