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KX822733.1__APC44397.1__X__00130

Bact-Vir

KX822733.1__APC44397.1__X__00130

Identity

Accession:
KX822733 ↗
Kingdom:
phage

Quality

79.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudoalteromonas_phage_PH357

TaxID: 1913046

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-70
PDB
Domain cluster: rep: BML_08042016_6_5m_scaffold_3_prodigal-single.1__X__X__00291__D6-60
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vf8B02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.73 60.0 4.08e-01 91.1% 32.7%
1yxsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 38.0 3.00e-01 100.0% 27.2%
6pnuB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.62 54.0 3.27e-01 100.0% 52.7%
3i44A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 47.0 2.93e-01 100.0% 54.0%
1vwxr00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.56 35.0 2.62e-01 97.8% 22.4%
4xhzA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 42.0 3.45e-01 95.6% 54.0%
6bxuA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 42.0 3.46e-01 95.6% 55.8%
1q8rA00 3.30.1330.70 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA 0.53 45.0 3.42e-01 100.0% 99.2%
1pkhB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.53 43.0 3.02e-01 100.0% 94.9%
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.20e-01 95.6% 50.0%
3pehA02 3.30.70.2140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 45.0 4.57e-01 97.8% 100.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253984 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.85 73.0 6.28e-01 95.6% 61.4%
3814464 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.82 73.0 5.80e-01 100.0% 73.3%
3314149 361.1.1.15 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF28694 0.82 68.0 6.85e-01 91.1% 100.0%
5024135 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.81 67.0 6.21e-01 100.0% 72.7%
4657257 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 64.0 3.35e-01 88.9% 4.5%
4168529 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.78 64.0 4.71e-01 93.3% 34.8%
4396778 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.77 64.0 5.61e-01 91.1% 63.1%
4341103 67.1.1.4 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C 0.76 63.0 4.65e-01 93.3% 36.4%
4125334 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.74 60.0 3.28e-01 88.9% 8.3%
3384875 361.1.1.5 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › GRXCR1_C 0.70 56.0 5.67e-01 86.7% 86.7%
3340092 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.68 56.0 3.95e-01 95.6% 35.3%
4942882 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.55 37.0 2.60e-01 71.1% 26.5%
3965708 5084.5.4.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.53 38.0 2.60e-01 100.0% 17.1%
3182185 5050.1.1.58 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.53 36.0 2.43e-01 80.0% 33.1%
3928395 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.51 38.0 3.20e-01 97.8% 57.1%
None — 0.51 43.0 2.90e-01 100.0% 33.3%
3951298 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 43.0 2.51e-01 100.0% 11.2%
3888235 922.1.1.0 ↗ few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat 0.50 35.0 3.52e-01 100.0% 75.6%