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KX822733.1__APC44481.1__X__00214

Bact-Vir

KX822733.1__APC44481.1__X__00214

Identity

Accession:
KX822733 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudoalteromonas_phage_PH357

TaxID: 1913046

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-40
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.89 78.0 6.27e-01 100.0% 56.9%
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.85 74.0 6.46e-01 100.0% 71.9%
2gviA03 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.83 66.0 6.91e-01 89.5% 97.1%
1v6gA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.83 58.0 4.56e-01 81.6% 35.8%
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.81 63.0 5.08e-01 84.2% 58.6%
1xa6A02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.79 65.0 5.52e-01 100.0% 60.9%
1wfkA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.77 58.0 4.55e-01 81.6% 42.9%
1uw0A01 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.76 60.0 4.72e-01 100.0% 54.2%
2darA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.76 62.0 5.19e-01 100.0% 52.8%
2mbvA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.73 53.0 4.05e-01 81.6% 39.6%
1rfhA01 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.71 58.0 5.73e-01 100.0% 97.6%
2d8yA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.71 58.0 4.73e-01 92.1% 52.8%
5tabA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.68 50.0 4.52e-01 81.6% 64.2%
3aslA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 49.0 4.13e-01 84.2% 54.4%
5tdrA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 49.0 4.11e-01 84.2% 51.4%
2ewlA00 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 49.0 4.33e-01 86.8% 78.6%
1g2bA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 4.15e-01 89.5% 67.7%
1kcgB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 39.0 2.89e-01 78.9% 80.5%
4ylmX00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.53 38.0 2.37e-01 84.2% 44.2%
5of3A00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.52 36.0 2.23e-01 81.6% 10.7%
2mdgA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.52 35.0 3.20e-01 86.8% 45.5%
7xoiP01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 36.0 3.11e-01 84.2% 63.6%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 2.88e-01 97.4% 89.1%
3kk7A01 3.30.420.400 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.51 43.0 3.17e-01 100.0% 89.9%
7wrgB01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.51 40.0 2.46e-01 100.0% 29.1%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 39.0 2.96e-01 100.0% 66.7%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 35.0 2.60e-01 81.6% 60.7%
2g3mA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 40.0 3.39e-01 100.0% 66.7%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940041 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.91 67.0 6.92e-01 78.9% 85.7%
3741127 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.89 68.0 6.14e-01 81.6% 66.0%
5069246 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.89 75.0 6.89e-01 94.7% 76.0%
3233487 377.1.2.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger 0.89 77.0 6.16e-01 100.0% 53.3%
3923898 377.1.2.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger 0.88 77.0 6.01e-01 100.0% 48.8%
3206107 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.88 64.0 6.68e-01 78.9% 85.7%
3865409 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.87 76.0 6.52e-01 100.0% 68.3%
3518394 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.86 63.0 6.48e-01 78.9% 85.7%
3893430 377.1.1.51 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM_FHL2-3_N 0.86 60.0 5.11e-01 76.3% 46.7%
3804854 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.86 76.0 5.30e-01 100.0% 35.7%
3351761 377.1.2.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP 0.84 72.0 5.41e-01 100.0% 52.6%
3990333 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.84 72.0 5.80e-01 100.0% 54.7%
4959872 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.83 61.0 6.08e-01 81.6% 75.0%
3459484 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.83 71.0 6.36e-01 100.0% 94.5%
3817698 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.83 72.0 5.54e-01 100.0% 47.1%
4958983 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.82 62.0 5.85e-01 84.2% 68.9%
3516861 377.1.1.51 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM_FHL2-3_N 0.82 70.0 6.44e-01 100.0% 88.0%
3445801 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.81 71.0 6.11e-01 100.0% 73.3%
3440301 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.81 67.0 5.64e-01 100.0% 60.0%
3829227 376.1.2.26 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF28755 0.81 71.0 6.11e-01 100.0% 63.3%
3796618 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.81 63.0 4.94e-01 86.8% 50.0%
3718357 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.81 64.0 6.07e-01 86.8% 73.3%
3624531 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.80 65.0 6.18e-01 92.1% 95.6%
4929230 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.80 65.0 6.50e-01 94.7% 97.5%
3371995 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 67.0 5.09e-01 100.0% 49.5%
3827226 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.80 71.0 6.04e-01 100.0% 83.3%
3831912 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.80 69.0 4.76e-01 100.0% 36.8%
3606453 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.79 70.0 6.16e-01 100.0% 69.1%
3597664 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.79 67.0 6.46e-01 100.0% 91.1%
5067072 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.79 61.0 5.54e-01 84.2% 66.0%
3633930 376.1.2.26 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF28755 0.78 67.0 5.21e-01 100.0% 44.7%
3573945 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.78 70.0 5.55e-01 100.0% 57.3%
4011230 375.4.1.0 ↗ few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like 0.78 66.0 6.14e-01 100.0% 76.0%
3848018 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 56.0 5.91e-01 78.9% 100.0%
3803741 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.78 67.0 6.01e-01 100.0% 70.9%
3540237 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 55.0 5.83e-01 76.3% 96.7%
3825364 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 67.0 4.11e-01 100.0% 17.0%
3816107 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.78 66.0 5.95e-01 100.0% 85.5%
3338486 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.77 67.0 6.16e-01 100.0% 76.0%
3695063 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.77 64.0 5.27e-01 100.0% 52.0%
3831606 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.77 66.0 5.43e-01 100.0% 61.4%
5067930 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.76 58.0 4.57e-01 84.2% 40.0%
3659796 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.76 65.0 5.28e-01 100.0% 51.4%
3808141 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.76 65.0 4.69e-01 100.0% 39.1%
3203266 376.1.2.26 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF28755 0.76 65.0 6.21e-01 100.0% 84.4%
3542222 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.76 56.0 5.76e-01 84.2% 94.3%
3803134 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.76 62.0 5.50e-01 100.0% 75.0%
3711221 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 65.0 5.81e-01 100.0% 69.1%
3799773 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.75 61.0 5.85e-01 92.1% 88.9%
3567421 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 53.0 5.46e-01 76.3% 96.7%
3584576 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.75 56.0 5.25e-01 84.2% 67.3%
3842866 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.75 62.0 5.65e-01 100.0% 70.9%
3832466 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.75 63.0 4.55e-01 100.0% 33.9%
3734963 376.1.1.66 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 0.74 56.0 5.75e-01 84.2% 91.4%
8118 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.74 61.0 4.77e-01 100.0% 42.7%
3852695 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.74 59.0 5.16e-01 92.1% 68.3%
4990542 377.1.1.128 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2175 0.74 55.0 5.29e-01 84.2% 71.1%
3828760 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.74 61.0 5.86e-01 100.0% 86.7%
3299628 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.74 62.0 5.08e-01 100.0% 56.0%
1323436 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.73 51.0 5.29e-01 78.9% 85.7%
3554759 376.1.3.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 0.73 55.0 4.76e-01 84.2% 53.3%
4378478 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.72 59.0 5.24e-01 100.0% 63.3%
3893761 386.1.1.247 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › LIM 0.72 56.0 4.97e-01 86.8% 72.7%
3888562 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 51.0 5.32e-01 78.9% 100.0%
3957054 377.1.1.87 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF4193 0.71 54.0 5.64e-01 86.8% 100.0%
3479199 376.1.1.52 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM 0.71 59.0 4.95e-01 97.4% 67.6%
3822211 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.71 58.0 4.34e-01 100.0% 50.5%
3309791 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.69 57.0 5.54e-01 100.0% 93.3%
3554324 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.69 48.0 4.98e-01 76.3% 96.7%
3690640 375.1.1.221 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf_Tbcl_Rhp7 0.68 53.0 4.97e-01 92.1% 72.0%
3380766 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.68 51.0 3.91e-01 86.8% 36.0%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.59e-01 92.1% 68.3%
2880044 375.1.1.4 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP 0.56 36.0 3.66e-01 81.6% 64.1%
4263982 375.1.1.302 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MRNIP 0.53 37.0 3.39e-01 86.8% 54.5%
4475754 4076.2.1.5 ↗ a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MRNIP 0.52 37.0 3.20e-01 86.8% 46.2%