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KX827369.1__APD19883.1__SpT152_068__00068
Bact-VirKX827369.1__APD19883.1__SpT152_068__00068
Identity
- Accession:
- KX827369 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Taxonomy
TaxID: 1913446
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-91
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 44.0 | 3.73e-01 | 75.8% | 55.1% |
| 1sj7C00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.60 | 46.0 | 3.86e-01 | 84.6% | 72.3% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.57 | 39.0 | 3.98e-01 | 71.4% | 83.3% |
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.57 | 44.0 | 3.55e-01 | 86.8% | 74.5% |
| 2rd3D00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 40.0 | 3.16e-01 | 82.4% | 42.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3912763 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.68 | 50.0 | 3.89e-01 | 79.1% | 77.1% |
| 5053992 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 45.0 | 3.99e-01 | 72.5% | 60.0% |
| 5005176 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.58 | 40.0 | 4.54e-01 | 83.5% | 100.0% |
| 3537310 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 36.0 | 4.15e-01 | 71.4% | 96.9% |
D2
medium
residues 92-171
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhyG01 | 1.20.1280.10 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 | 0.70 | 42.0 | 4.55e-01 | 100.0% | 70.6% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.60 | 40.0 | 3.96e-01 | 100.0% | 63.2% |
| 1tizA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 24.0 | 2.60e-01 | 100.0% | 46.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590947 | 1141.1.1.0 ↗ | alpha arrays › Glycosyl transferase TarS linker domain › Glycosyl transferase TarS linker domain › Glycosyl transferase TarS linker domain | 0.66 | 42.0 | 3.76e-01 | 95.0% | 46.4% |
| 3928004 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 43.0 | 4.22e-01 | 100.0% | 63.3% |
| 3798195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 35.0 | 3.49e-01 | 95.0% | 52.9% |
| 3452168 | 192.29.1.238 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF3475 | 0.60 | 41.0 | 3.81e-01 | 100.0% | 57.0% |
| 3657184 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.59 | 43.0 | 3.86e-01 | 77.5% | 70.0% |
| 3519081 | 101.1.17.16 ↗ | alpha arrays › HTH › HTH › FF domain › FF_RHG35_4th | 0.56 | 31.0 | 3.48e-01 | 95.0% | 71.7% |
| 3925702 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.54 | 46.0 | 4.68e-01 | 100.0% | 100.0% |
| 4310765 | 131.1.1.4 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc | 0.52 | 43.0 | 2.76e-01 | 96.2% | 77.2% |
| 3231105 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.51 | 45.0 | 2.98e-01 | 100.0% | 24.3% |
| 3918979 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 2.98e-01 | 91.3% | 29.6% |
| 3224417 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.51 | 40.0 | 3.69e-01 | 90.0% | 93.6% |
| 4304214 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.50 | 42.0 | 3.75e-01 | 100.0% | 65.2% |