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KX879752.1__APC45943.1__QHH_31__00031
Bact-VirKX879752.1__APC45943.1__QHH_31__00031
Identity
- Accession:
- KX879752 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 332-421
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1usyC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 39.0 | 2.83e-01 | 83.3% | 69.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018098 | 2.14.1.6 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › DUF3006 | 0.55 | 25.0 | 2.73e-01 | 93.3% | 48.0% |
| 4285716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 23.0 | 3.00e-01 | 92.2% | 68.0% |
D2
medium
residues 276-331_422-597_611-662
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.77 | 27.0 | 5.00e-01 | 96.5% | 100.0% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.76 | 23.0 | 3.13e-01 | 95.8% | 48.8% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.73 | 25.0 | 3.24e-01 | 97.2% | 52.9% |
| 2egvA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 18.0 | 3.82e-01 | 97.2% | 100.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 23.0 | 3.51e-01 | 98.9% | 80.3% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.59 | 16.0 | 2.55e-01 | 93.0% | 54.2% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.59 | 20.0 | 3.35e-01 | 97.5% | 83.0% |
| 2gmqA00 | 2.40.450.10 | Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain | 0.58 | 23.0 | 3.80e-01 | 99.3% | 100.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 22.0 | 3.25e-01 | 98.2% | 76.0% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.58 | 21.0 | 3.43e-01 | 98.9% | 87.6% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 20.0 | 3.30e-01 | 97.9% | 83.5% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.56 | 22.0 | 3.49e-01 | 98.6% | 93.3% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 21.0 | 3.50e-01 | 95.4% | 95.0% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 21.0 | 3.47e-01 | 97.9% | 93.3% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 17.0 | 3.27e-01 | 96.1% | 95.3% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.54 | 19.0 | 3.04e-01 | 98.2% | 80.8% |
| 4fomA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 20.0 | 3.37e-01 | 95.1% | 96.0% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.54 | 15.0 | 2.23e-01 | 70.4% | 50.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 21.0 | 3.37e-01 | 95.8% | 97.1% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 16.0 | 2.90e-01 | 94.7% | 87.5% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 16.0 | 2.85e-01 | 95.4% | 83.9% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 20.0 | 3.09e-01 | 95.8% | 87.2% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.50 | 24.0 | 3.34e-01 | 96.5% | 90.5% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 19.0 | 3.24e-01 | 95.4% | 99.0% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 20.0 | 3.19e-01 | 95.4% | 94.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 25.0 | 5.01e-01 | 96.8% | 100.0% |
| 4957568 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 23.0 | 4.78e-01 | 70.8% | 100.0% |
| 2475125 | 3071.1.1.7 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 | 0.74 | 39.0 | 5.27e-01 | 71.1% | 92.4% |
| 4889790 | 3071.1.1.7 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 | 0.74 | 42.0 | 5.51e-01 | 71.1% | 96.4% |
| 3817212 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 18.0 | 3.82e-01 | 92.3% | 88.6% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 18.0 | 3.46e-01 | 93.0% | 75.0% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 26.0 | 4.43e-01 | 96.8% | 96.2% |
| 3943689 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 25.0 | 4.26e-01 | 96.8% | 93.6% |
| 3187986 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 19.0 | 3.16e-01 | 93.0% | 66.7% |
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.66 | 24.0 | 4.09e-01 | 97.9% | 96.8% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.65 | 21.0 | 3.80e-01 | 97.5% | 90.0% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.65 | 20.0 | 3.76e-01 | 97.2% | 91.8% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 22.0 | 3.71e-01 | 97.5% | 88.4% |
| 4991187 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 22.0 | 3.84e-01 | 98.2% | 92.6% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 21.0 | 3.53e-01 | 98.2% | 83.2% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 22.0 | 3.38e-01 | 98.6% | 72.4% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.63 | 23.0 | 3.97e-01 | 70.4% | 96.0% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 23.0 | 3.87e-01 | 70.4% | 92.4% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 21.0 | 3.66e-01 | 98.9% | 91.1% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 20.0 | 3.55e-01 | 97.5% | 86.3% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.62 | 23.0 | 3.51e-01 | 98.9% | 78.3% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 23.0 | 3.42e-01 | 98.2% | 76.0% |
| 4551243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 22.0 | 3.38e-01 | 98.6% | 75.2% |
| 3363680 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 20.0 | 3.19e-01 | 97.5% | 75.5% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.59 | 22.0 | 3.47e-01 | 70.4% | 85.5% |
| 4562905 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.58 | 22.0 | 3.38e-01 | 98.9% | 79.2% |
| 3884573 | 11.1.1.318 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Rb_N | 0.58 | 18.0 | 3.20e-01 | 96.1% | 83.3% |
| 3853561 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.58 | 20.0 | 3.67e-01 | 95.1% | 100.0% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.58 | 23.0 | 3.35e-01 | 98.6% | 78.4% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.58 | 23.0 | 3.31e-01 | 98.9% | 76.7% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.58 | 22.0 | 3.40e-01 | 98.9% | 83.5% |
| 4539244 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.58 | 19.0 | 2.96e-01 | 97.5% | 71.4% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 22.0 | 3.30e-01 | 98.6% | 79.2% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 26.0 | 3.80e-01 | 97.5% | 96.0% |
| 4646862 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.56 | 19.0 | 3.05e-01 | 97.2% | 76.4% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 22.0 | 3.29e-01 | 98.9% | 79.2% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.56 | 27.0 | 3.51e-01 | 98.6% | 77.7% |
| 4525377 | 3112.1.1.1 ↗ | beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP | 0.54 | 14.0 | 2.89e-01 | 94.0% | 91.2% |
| 3408311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 19.0 | 3.29e-01 | 96.1% | 94.0% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.52 | 26.0 | 3.31e-01 | 98.2% | 79.9% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.51 | 26.0 | 3.27e-01 | 98.9% | 77.9% |
| 3847237 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.51 | 19.0 | 3.09e-01 | 96.1% | 89.5% |
| 3967003 | 1.1.13.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 | 0.50 | 24.0 | 3.39e-01 | 98.9% | 91.4% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.50 | 24.0 | 3.19e-01 | 97.2% | 80.8% |