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KX879752.1__APC45953.1__QHH_41__00041

Bact-Vir

KX879752.1__APC45953.1__QHH_41__00041

Identity

Accession:
KX879752 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Halomonas_phage_QHHSV-1

TaxID: 1913108

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: rep: MW677525.1__QXN72396.1__RCSIMONEHASTD_67__00067__D2-76
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.55 41.0 3.43e-01 78.9% 84.4%
2laeA00 3.30.310.170 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC 0.55 38.0 3.22e-01 71.8% 50.0%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 40.0 3.58e-01 78.9% 93.3%
3wo4C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.36e-01 70.4% 87.9%
4r6uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.34e-01 70.4% 81.8%
2jn9A01 2.40.30.80 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YkvR-like 0.52 37.0 3.45e-01 76.1% 100.0%
2o3oA02 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.50 34.0 2.92e-01 71.8% 60.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4182040 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.66 49.0 2.96e-01 78.9% 69.1%
3432393 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 44.0 3.74e-01 73.2% 79.8%
3274666 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 44.0 4.02e-01 77.5% 80.0%
3518759 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.59 44.0 2.69e-01 91.5% 13.0%
3372637 389.7.1.1 ↗ few secondary structure elements › EGF-like › EGF-like domain in S-receptor kinase SRK9 › EGF-like domain in S-receptor kinase SRK9 › S_locus_glycop 0.58 47.0 3.67e-01 90.1% 89.4%
3578603 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 39.0 3.85e-01 74.6% 80.0%
3449012 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 3.50e-01 77.5% 90.0%
3991923 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 35.0 3.05e-01 100.0% 41.8%
4873215 1.1.13.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.55 43.0 3.49e-01 87.3% 90.0%
3527527 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.54 37.0 3.18e-01 70.4% 92.2%
5082912 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 39.0 3.24e-01 81.7% 42.3%
4980443 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 36.0 3.25e-01 71.8% 51.8%
3787684 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.51 42.0 3.71e-01 100.0% 61.9%
3586471 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.53e-01 85.9% 82.2%
5067631 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.51 34.0 3.10e-01 71.8% 50.9%
3335639 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.50 39.0 3.09e-01 91.5% 58.3%