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KX905163.1__ARB07109.1__Semix9P1_phi66__00066
Bact-VirKX905163.1__ARB07109.1__Semix9P1_phi66__00066
Identity
- Accession:
- KX905163 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
TaxID: 1971232
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 53-128
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.93 | 77.0 | 5.51e-01 | 90.8% | 34.0% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.89 | 83.0 | 5.81e-01 | 100.0% | 35.7% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.83 | 73.0 | 5.27e-01 | 98.7% | 36.1% |
| 1qs1A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.81 | 72.0 | 5.24e-01 | 100.0% | 37.6% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.80 | 67.0 | 4.77e-01 | 98.7% | 32.5% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.74 | 63.0 | 4.64e-01 | 100.0% | 36.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2770556 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.98 | 95.0 | 6.53e-01 | 100.0% | 35.7% |
| 2034328 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.89 | 83.0 | 5.83e-01 | 100.0% | 36.0% |
| 4626477 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.79 | 67.0 | 5.00e-01 | 93.4% | 40.0% |
| 1893388 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.74 | 65.0 | 4.71e-01 | 100.0% | 35.9% |
| 3961841 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.68 | 53.0 | 5.54e-01 | 94.7% | 90.0% |
| 4279016 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.67 | 53.0 | 5.24e-01 | 94.7% | 80.0% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.67 | 53.0 | 3.71e-01 | 94.7% | 27.1% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.67 | 51.0 | 5.02e-01 | 93.4% | 77.5% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 53.0 | 5.13e-01 | 96.1% | 76.5% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.66 | 48.0 | 4.80e-01 | 90.8% | 73.8% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.65 | 46.0 | 4.20e-01 | 86.8% | 56.0% |
| 3578154 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 52.0 | 4.92e-01 | 94.7% | 73.3% |
| 3973709 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.65 | 53.0 | 4.72e-01 | 98.7% | 63.8% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.65 | 51.0 | 5.19e-01 | 96.1% | 86.7% |
| 3961604 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.63 | 49.0 | 4.48e-01 | 94.7% | 64.0% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.62 | 52.0 | 4.74e-01 | 100.0% | 69.0% |
| 3563979 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.56 | 40.0 | 3.29e-01 | 75.0% | 84.1% |
| 3923935 | 3065.1.1.2 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Gp-FAR-1 | 0.56 | 49.0 | 4.09e-01 | 100.0% | 84.3% |
| 4497587 | 516.1.1.1 ↗ | alpha arrays › YgfY-like (DUP399, Pfam03937) › YgfY-like (DUP399, Pfam03937) › YgfY-like (DUP399, Pfam03937) › Sdh5 | 0.54 | 39.0 | 3.96e-01 | 86.8% | 77.3% |
| 4956384 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.51 | 36.0 | 2.73e-01 | 75.0% | 93.8% |
D2
medium
residues 129-256
Domain cluster:
rep: KR063281.1__AKJ72552.1__GMA2_14__00014__D100-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03496.21 best | ADPrib_exo_Tox | 24.4 | 2.40e-05 | 100.0% | 63.6% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.97 | 94.0 | 7.90e-01 | 100.0% | 65.5% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.89 | 85.0 | 6.96e-01 | 100.0% | 60.1% |
| 2j3xA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.86 | 80.0 | 6.58e-01 | 100.0% | 58.3% |
| 4fk7A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.86 | 81.0 | 6.74e-01 | 99.2% | 65.5% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.85 | 80.0 | 6.68e-01 | 99.2% | 89.2% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.83 | 78.0 | 6.48e-01 | 100.0% | 66.0% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.82 | 76.0 | 6.38e-01 | 98.4% | 64.9% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.82 | 77.0 | 6.46e-01 | 99.2% | 63.9% |
| 1gzeA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.81 | 77.0 | 6.39e-01 | 100.0% | 62.8% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.81 | 75.0 | 6.33e-01 | 99.2% | 62.3% |
| 1ojqA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.80 | 75.0 | 6.25e-01 | 100.0% | 65.1% |
| 1qs1A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.79 | 71.0 | 6.08e-01 | 99.2% | 62.4% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.71 | 56.0 | 4.52e-01 | 99.2% | 44.8% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.70 | 59.0 | 4.95e-01 | 100.0% | 54.5% |
| 2gwlA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.65 | 60.0 | 5.13e-01 | 100.0% | 65.0% |
| 2kbnA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 36.0 | 3.87e-01 | 89.1% | 77.1% |
| 3a6sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 31.0 | 3.19e-01 | 97.7% | 56.0% |
| 4ebjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 28.0 | 2.86e-01 | 96.9% | 47.7% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 36.0 | 3.86e-01 | 89.8% | 80.7% |
| 1sxvA00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.51 | 36.0 | 3.30e-01 | 98.4% | 56.9% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2770556 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.96 | 93.0 | 7.54e-01 | 99.2% | 59.6% |
| 2034328 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.89 | 84.0 | 6.93e-01 | 99.2% | 60.2% |
| 308110 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.88 | 83.0 | 6.76e-01 | 99.2% | 58.3% |
| 4277383 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.86 | 81.0 | 6.48e-01 | 100.0% | 60.9% |
| 7439 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.85 | 80.0 | 6.66e-01 | 99.2% | 88.3% |
| 1562728 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.82 | 76.0 | 6.38e-01 | 98.4% | 64.9% |
| 1893388 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.82 | 76.0 | 6.34e-01 | 98.4% | 63.6% |
| 4294371 | 237.1.1.14 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › Anthrax-tox_M | 0.82 | 77.0 | 5.77e-01 | 100.0% | 44.1% |
| 7442 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.80 | 75.0 | 6.25e-01 | 100.0% | 65.1% |
| 157262 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.80 | 75.0 | 6.29e-01 | 100.0% | 62.5% |
| 7440 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.79 | 71.0 | 6.08e-01 | 99.2% | 62.4% |
| 2410012 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.78 | 58.0 | 5.05e-01 | 99.2% | 53.0% |
| 3280971 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.77 | 58.0 | 5.41e-01 | 100.0% | 63.5% |
| 4157545 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.75 | 59.0 | 5.55e-01 | 98.4% | 70.0% |
| 2547952 | 237.1.1.34 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox | 0.71 | 56.0 | 4.52e-01 | 99.2% | 44.8% |
| 1687631 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.70 | 59.0 | 4.87e-01 | 100.0% | 52.0% |
| 4563308 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.64 | 58.0 | 4.89e-01 | 97.7% | 61.1% |
| 3886084 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.63 | 59.0 | 4.83e-01 | 100.0% | 73.8% |
| 3666818 | 2.1.1.138 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ATG11 | 0.62 | 39.0 | 4.79e-01 | 87.5% | 100.0% |
| 3987874 | 375.1.1.253 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 | 0.61 | 29.0 | 3.76e-01 | 75.0% | 78.7% |
| 2557339 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.57 | 34.0 | 3.67e-01 | 98.4% | 69.4% |
| 3252916 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.56 | 37.0 | 4.18e-01 | 89.1% | 86.0% |
| 3605283 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.56 | 50.0 | 4.06e-01 | 100.0% | 62.8% |
| 3543181 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.54 | 30.0 | 3.05e-01 | 96.9% | 54.4% |
| 4991697 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 40.0 | 4.20e-01 | 84.4% | 86.8% |
| 3975388 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 32.0 | 3.19e-01 | 98.4% | 55.8% |
| 3193754 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.52 | 37.0 | 3.88e-01 | 85.9% | 79.7% |
| 3978281 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 31.0 | 3.08e-01 | 97.7% | 56.9% |
| 4009092 | 2.1.1.139 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Slp | 0.51 | 40.0 | 4.04e-01 | 88.3% | 84.8% |
| 1780166 | 2.5.1.1 ↗ | beta barrels › OB-fold › Inorganic pyrophosphatase › Inorganic pyrophosphatase › Pyrophosphatase | 0.50 | 40.0 | 3.13e-01 | 98.4% | 40.7% |
D3
medium
residues 257-331
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03496.21 best | ADPrib_exo_Tox | 48.3 | 1.10e-12 | 88.0% | 33.3% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.93 | 86.0 | 6.06e-01 | 98.7% | 36.6% |
| 1qs1A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.92 | 86.0 | 6.07e-01 | 100.0% | 37.6% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.89 | 78.0 | 5.44e-01 | 100.0% | 33.0% |
| 4fk7A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.86 | 76.0 | 5.35e-01 | 100.0% | 34.5% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.82 | 74.0 | 5.29e-01 | 100.0% | 36.2% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.80 | 72.0 | 5.12e-01 | 97.3% | 38.2% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.76 | 66.0 | 4.84e-01 | 100.0% | 36.0% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.73 | 59.0 | 4.36e-01 | 89.3% | 34.5% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.90e-01 | 85.3% | 74.7% |
| 2llwA00 | 1.10.260.100 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.62 | 46.0 | 4.72e-01 | 80.0% | 83.1% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 4.90e-01 | 89.3% | 93.8% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 33.0 | 3.56e-01 | 77.3% | 68.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 35.0 | 3.65e-01 | 78.7% | 74.6% |
| 2datA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 43.0 | 3.77e-01 | 98.7% | 93.5% |
| 3iwfB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.60e-01 | 98.7% | 67.4% |
| 2f76X00 | 1.10.150.490 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein | 0.51 | 38.0 | 3.49e-01 | 81.3% | 73.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4277383 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.91 | 86.0 | 5.87e-01 | 100.0% | 38.3% |
| 308103 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.89 | 78.0 | 5.48e-01 | 100.0% | 33.2% |
| 1893388 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.89 | 84.0 | 5.85e-01 | 100.0% | 36.4% |
| 157262 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 74.0 | 5.27e-01 | 100.0% | 34.6% |
| 4626477 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.81 | 69.0 | 5.20e-01 | 93.3% | 40.6% |
| 7439 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.76 | 66.0 | 4.83e-01 | 100.0% | 35.6% |
| 4146353 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.65 | 51.0 | 5.02e-01 | 94.7% | 80.0% |
| 4961952 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.64 | 49.0 | 4.93e-01 | 80.0% | 82.7% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 51.0 | 4.96e-01 | 96.0% | 80.0% |
| 3804069 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.60 | 43.0 | 4.05e-01 | 85.3% | 61.1% |
| 5007486 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.58 | 52.0 | 5.24e-01 | 97.3% | 98.7% |
| 3268786 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.52 | 37.0 | 3.29e-01 | 80.0% | 47.2% |
D4
medium
residues 332-461
Domain cluster:
rep: KR063281.1__AKJ72552.1__GMA2_14__00014__D100-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03496.21 best | ADPrib_exo_Tox | 112.4 | 2.50e-32 | 100.0% | 63.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.98 | 94.0 | 7.82e-01 | 100.0% | 63.4% |
| 1qs1A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.96 | 88.0 | 7.37e-01 | 100.0% | 61.9% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.90 | 87.0 | 7.12e-01 | 100.0% | 65.1% |
| 4fk7A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.88 | 85.0 | 7.08e-01 | 100.0% | 65.0% |
| 1gzeA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.88 | 82.0 | 6.82e-01 | 100.0% | 61.4% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.87 | 82.0 | 6.86e-01 | 99.2% | 64.4% |
| 1ojqA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.85 | 81.0 | 6.68e-01 | 100.0% | 64.2% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 78.0 | 6.45e-01 | 100.0% | 59.2% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 79.0 | 6.62e-01 | 100.0% | 63.1% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.84 | 78.0 | 6.49e-01 | 100.0% | 61.8% |
| 2j3xA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.82 | 74.0 | 6.12e-01 | 100.0% | 57.3% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.81 | 73.0 | 6.29e-01 | 100.0% | 64.4% |
| 3u0jA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.80 | 67.0 | 5.34e-01 | 99.2% | 48.3% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.79 | 62.0 | 4.94e-01 | 100.0% | 43.9% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.77 | 64.0 | 5.30e-01 | 100.0% | 53.1% |
| 2gwlA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.70 | 67.0 | 5.64e-01 | 100.0% | 66.0% |
| 6we5A00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.66 | 40.0 | 3.42e-01 | 96.2% | 38.3% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 31.0 | 3.37e-01 | 96.9% | 52.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.57 | 31.0 | 3.59e-01 | 99.2% | 71.6% |
| 4l5rC02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 35.0 | 4.05e-01 | 91.5% | 91.0% |
| 3eesA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 33.0 | 3.34e-01 | 100.0% | 58.8% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 35.0 | 4.03e-01 | 88.5% | 93.4% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.51 | 31.0 | 3.39e-01 | 99.2% | 72.6% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 30.0 | 3.02e-01 | 100.0% | 55.6% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 34.0 | 3.63e-01 | 90.8% | 79.8% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 33.0 | 3.50e-01 | 91.5% | 75.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7440 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.96 | 88.0 | 7.37e-01 | 100.0% | 61.9% |
| 1893388 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.96 | 93.0 | 7.59e-01 | 99.2% | 63.2% |
| 308103 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.90 | 87.0 | 7.09e-01 | 100.0% | 64.5% |
| 4277383 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.88 | 85.0 | 6.77e-01 | 100.0% | 60.0% |
| 157262 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.87 | 82.0 | 6.79e-01 | 100.0% | 61.1% |
| 1562728 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.87 | 82.0 | 6.86e-01 | 99.2% | 64.4% |
| 4157545 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.86 | 67.0 | 6.31e-01 | 99.2% | 69.3% |
| 7442 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.85 | 81.0 | 6.68e-01 | 100.0% | 64.2% |
| 3280971 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.85 | 65.0 | 5.97e-01 | 100.0% | 64.2% |
| 2410012 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.85 | 63.0 | 5.51e-01 | 100.0% | 54.1% |
| 2034328 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 78.0 | 6.47e-01 | 100.0% | 59.7% |
| 7439 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.84 | 79.0 | 6.60e-01 | 100.0% | 62.4% |
| 4294371 | 237.1.1.14 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › Anthrax-tox_M | 0.83 | 77.0 | 5.74e-01 | 100.0% | 43.4% |
| 308110 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.82 | 74.0 | 6.15e-01 | 100.0% | 57.9% |
| 4424922 | 237.1.1.34 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox | 0.82 | 61.0 | 4.98e-01 | 100.0% | 44.3% |
| 2770556 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.81 | 74.0 | 6.19e-01 | 100.0% | 59.2% |
| 3901979 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.80 | 63.0 | 5.04e-01 | 100.0% | 45.1% |
| 2547952 | 237.1.1.34 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox | 0.79 | 62.0 | 4.94e-01 | 100.0% | 43.9% |
| 3886084 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.79 | 62.0 | 5.07e-01 | 100.0% | 47.6% |
| 1687631 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.77 | 64.0 | 5.21e-01 | 100.0% | 50.7% |
| 3714758 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.73 | 66.0 | 5.21e-01 | 100.0% | 50.2% |
| 3612144 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.73 | 65.0 | 4.63e-01 | 100.0% | 34.6% |
| 4563308 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.69 | 65.0 | 5.42e-01 | 98.5% | 62.5% |
| 2387820 | 237.1.1.22 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › SidE_mART | 0.69 | 65.0 | 4.78e-01 | 100.0% | 97.1% |
| 3580019 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 32.0 | 4.36e-01 | 93.8% | 96.9% |
| 3987874 | 375.1.1.253 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 | 0.62 | 28.0 | 3.70e-01 | 76.9% | 76.0% |
| 3543181 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.58 | 32.0 | 3.27e-01 | 97.7% | 54.4% |
| 3829071 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 40.0 | 4.44e-01 | 73.1% | 95.2% |
| 3975388 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.57 | 33.0 | 3.31e-01 | 99.2% | 55.1% |
| 3926921 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 33.0 | 2.98e-01 | 98.5% | 43.1% |
| 3193754 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.55 | 39.0 | 4.05e-01 | 87.7% | 79.7% |
| 3426514 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.55 | 37.0 | 4.14e-01 | 81.5% | 89.0% |
| 3947875 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.55 | 33.0 | 3.32e-01 | 99.2% | 59.2% |
| 3414735 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.55 | 38.0 | 4.12e-01 | 84.6% | 84.5% |
| 3978281 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.54 | 32.0 | 3.30e-01 | 99.2% | 59.2% |
| 2557339 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.54 | 33.0 | 3.58e-01 | 98.5% | 71.3% |
| 2756306 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 37.0 | 4.07e-01 | 82.3% | 88.3% |
| 4991697 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 40.0 | 4.26e-01 | 86.2% | 88.6% |
| 5069582 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 35.0 | 4.04e-01 | 92.3% | 91.6% |
| 3275931 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.53 | 36.0 | 3.84e-01 | 72.3% | 78.3% |
| 3227724 | 7516.1.1.13 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_7C,Glyco_transf_7N | 0.52 | 38.0 | 2.91e-01 | 74.6% | 83.4% |
| 3543766 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 28.0 | 3.07e-01 | 88.5% | 61.8% |
| 4966723 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 33.0 | 3.53e-01 | 88.5% | 77.3% |
| 3212469 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 33.0 | 3.34e-01 | 90.0% | 66.2% |